Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 7.8e-103 377.1 185 100.0
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 7.1e-56 221.1 189 60.3
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 6.0e-55 218.0 182 60.4
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 6.0e-55 218.0 177 63.3
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 4.3e-53 211.8 182 59.3
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 5.7e-53 211.5 177 62.1
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 7.6e-50 201.1 184 58.2
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 1.3e-49 200.3 184 57.6
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 2.2e-49 199.5 194 56.7
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 3.8e-49 198.7 184 57.6
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 5.0e-49 198.4 182 57.1
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 1.1e-48 197.2 166 58.4
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.1e-48 197.2 179 59.2
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 7.2e-48 194.5 185 55.1
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 2.1e-47 193.0 177 57.1
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 2.7e-47 192.6 183 55.2
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.3e-46 190.3 182 54.9
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 1.8e-46 189.9 171 57.9
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 3.9e-46 188.7 170 61.2
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 3.9e-46 188.7 181 58.6
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 3.9e-46 188.7 181 54.7
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 5.7e-45 184.9 173 52.0
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 9.7e-45 184.1 180 56.1
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 2.8e-44 182.6 183 54.1
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.8e-43 179.9 172 54.1
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 6.9e-43 177.9 175 53.7
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 1.2e-42 177.2 183 53.0
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 1.7e-41 173.3 182 54.4
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 5.0e-41 171.8 177 54.2
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 8.5e-41 171.0 182 54.4
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 1.1e-40 170.6 188 49.5
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.4e-40 170.2 193 47.7
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 1.9e-40 169.9 170 54.7
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.9e-40 169.9 178 55.1
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 2.5e-40 169.5 180 53.3
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 1.6e-39 166.8 178 51.7
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 2.1e-39 166.4 174 54.6
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.6e-39 165.6 174 52.3
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 3.6e-39 165.6 176 52.8
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 6.1e-39 164.9 188 48.9
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.0e-38 164.1 188 49.5
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 1.8e-38 163.3 109 71.6
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 2.3e-38 162.9 174 54.6
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 3.0e-38 162.5 173 51.4
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 8.8e-38 161.0 173 50.9
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 2.0e-37 159.8 177 52.0
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 2.6e-37 159.5 177 51.4
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 3.3e-37 159.1 137 60.6
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 7.4e-37 157.9 164 54.3
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 2.2e-36 156.4 169 50.3
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 2.8e-36 156.0 106 69.8
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 4.8e-36 155.2 175 48.6
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 6.3e-36 154.8 108 69.4
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 1.1e-35 154.1 115 62.6
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 2.4e-35 152.9 172 49.4
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 4.1e-35 152.1 104 69.2
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 5.3e-35 151.8 175 50.9
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 5.3e-35 151.8 107 65.4
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 5.3e-35 151.8 164 54.3
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 9.1e-35 151.0 108 65.7
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 1.2e-34 150.6 103 68.9
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 2.0e-34 149.8 167 49.7
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 5.9e-34 148.3 248 37.1
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.7e-33 146.7 151 53.0
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.2e-33 146.4 151 53.0
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.9e-33 146.0 157 51.0
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 6.5e-33 144.8 104 66.3
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 8.5e-33 144.4 172 48.8
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 8.5e-33 144.4 180 45.6
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 1.4e-32 143.7 112 64.3
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 1.4e-32 143.7 109 61.5
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 4.2e-32 142.1 106 63.2
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 2.1e-31 139.8 104 64.4
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 6.1e-31 138.3 188 46.3
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 2.3e-30 136.3 90 70.0
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 3.0e-30 136.0 192 42.7
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 1.5e-29 133.7 106 59.4
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 3.3e-29 132.5 107 65.4
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 9.7e-29 131.0 186 42.5
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 9.7e-29 131.0 120 58.3
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 9.7e-29 131.0 120 58.3
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 1.7e-28 130.2 185 42.2
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 2.2e-28 129.8 250 34.8
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 6.3e-28 128.3 188 41.0
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 8.2e-28 127.9 195 43.6
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 1.4e-27 127.1 113 59.3
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 3.1e-27 125.9 177 44.1
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 4.1e-27 125.6 197 40.1
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 5.3e-27 125.2 106 59.4
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 1.2e-26 124.0 195 39.0
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 1.6e-26 123.6 177 43.5
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 1.6e-26 123.6 195 41.0
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 2.6e-26 122.9 187 42.8
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 4.5e-26 122.1 195 41.0
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 5.9e-26 121.7 195 42.1
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 1.0e-25 120.9 195 40.5
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 1.0e-25 120.9 191 40.3
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 1.3e-25 120.6 189 43.9
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 1.7e-25 120.2 192 41.1
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 2.2e-25 119.8 195 40.0
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 2.2e-25 119.8 110 57.3
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 3.8e-25 119.0 196 39.8
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 5.0e-25 118.6 195 42.1
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 5.0e-25 118.6 118 53.4
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 6.5e-25 118.2 188 41.5
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 1.1e-24 117.5 87 64.4
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 1.9e-24 116.7 188 41.0
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.9e-24 116.7 195 42.1
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.2e-23 114.0 213 35.7
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 6.1e-23 111.7 195 40.0
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.0e-22 110.9 99 53.5
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 1.5e-21 107.1 64 68.8
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 2.0e-21 106.7 104 50.0
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 5.7e-21 105.1 102 53.9
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 1.7e-20 103.6 169 36.1
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.1e-19 100.9 64 70.3
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 1.4e-19 100.5 122 43.4
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.4e-19 100.5 167 38.3
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 2.4e-19 99.8 168 35.7
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 2.4e-19 99.8 168 35.7
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 3.1e-19 99.4 89 51.7
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 7.0e-19 98.2 206 34.5
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 3.5e-18 95.9 121 42.1
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 8.5e-17 91.3 92 45.7
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 9.4e-16 87.8 62 58.1
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 9.4e-16 87.8 62 58.1
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 2.1e-15 86.7 62 58.1
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 2.1e-15 86.7 62 58.1
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 2.1e-15 86.7 62 58.1
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 2.1e-15 86.7 62 58.1
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 3.6e-15 85.9 71 56.3
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 6.1e-07 58.5 61 37.7
CARHR123780 Cardamine hirsuta HOM05D005957 ORTHO05D007318 4.0e-06 55.8 157 32.5
arahy.Tifrunner.gnm1.ann1.170V9L Arachis hypogaea HOM05D002997 ORTHO05D003021 8.8e-06 54.7 59 39.0


User provided reference genes

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