Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g14810 Coffea canephora HOM05D004740 ORTHO05D005991 7.7e-164 580.5 307 100.0
Solyc01g006980.4 Solanum lycopersicum HOM05D004740 ORTHO05D005991 8.3e-150 533.9 297 92.3
Sopen01g002970 Solanum pennellii HOM05D004740 ORTHO05D005991 1.1e-149 533.5 297 91.9
PGSC0003DMG400021362 Solanum tuberosum HOM05D004740 ORTHO05D005991 2.4e-149 532.3 297 92.3
Nitab4.5_0002737g0070 Nicotiana tabacum HOM05D004740 ORTHO05D005991 1.2e-148 530.0 297 92.6
Peaxi162Scf00055g00057 Petunia axillaris HOM05D004740 ORTHO05D005991 1.2e-148 530.0 297 91.6
Dinv28694 Davidia involucrata HOM05D004740 ORTHO05D005991 3.5e-148 528.5 297 92.6
Nitab4.5_0001121g0110 Nicotiana tabacum HOM05D004740 ORTHO05D005991 3.5e-148 528.5 297 92.6
CAN.G911.42 Capsicum annuum HOM05D004740 ORTHO05D005991 1.0e-147 526.9 297 91.2
CiPaw.13G069800 Carya illinoinensis HOM05D004740 ORTHO05D005991 3.8e-147 525.0 297 90.6
Thecc.09G357100 Theobroma cacao HOM05D004740 ORTHO05D005991 5.0e-147 524.6 297 90.6
SGA_v2.0_scaffold146G36123 Striga asiatica HOM05D004740 ORTHO05D005991 8.5e-147 523.9 297 92.3
vmacro02923 Vaccinium macrocarpon HOM05D004740 ORTHO05D005991 1.1e-146 523.5 297 91.2
Rhsim13G0064700 Rhododendron simsii HOM05D004740 ORTHO05D005991 1.5e-146 523.1 297 91.6
QL01p026440 Quercus lobata HOM05D004740 ORTHO05D005991 1.9e-146 522.7 296 90.9
TAR623G0659 Trochodendron aralioides HOM05D004740 ORTHO05D005991 1.9e-146 522.7 297 91.2
arahy.Tifrunner.gnm1.ann1.FJ253B Arachis hypogaea HOM05D004740 ORTHO05D005991 2.5e-146 522.3 297 90.6
MSTRG.17889 Avicennia marina HOM05D004740 ORTHO05D005991 2.5e-146 522.3 297 90.9
arahy.Tifrunner.gnm1.ann1.MX8U3M Arachis hypogaea HOM05D004740 ORTHO05D005991 5.5e-146 521.2 297 90.2
SalBow2G1640 Salvia bowleyana HOM05D004740 ORTHO05D005991 5.5e-146 521.2 297 90.6
CSS0045632 Camellia sinensis var. sinensis HOM05D004740 ORTHO05D005991 7.2e-146 520.8 297 90.6
Gohir.A03G025700 Gossypium hirsutum HOM05D004740 ORTHO05D005991 1.6e-145 519.6 297 90.2
arahy.Tifrunner.gnm1.ann1.T9C115 Arachis hypogaea HOM05D004740 ORTHO05D005991 2.1e-145 519.2 297 89.9
COL.COLO4_11143 Corchorus olitorius HOM05D004740 ORTHO05D005991 2.7e-145 518.8 297 89.9
Haze_24407 Corylus avellana HOM05D004740 ORTHO05D005991 2.7e-145 518.8 297 90.2
Lj2A1092T52 Lonicera japonica HOM05D004740 ORTHO05D005991 2.7e-145 518.8 297 90.2
Cfa011772 Carpinus fangiana HOM05D004740 ORTHO05D005991 4.7e-145 518.1 297 90.6
Gohir.D03G142800 Gossypium hirsutum HOM05D004740 ORTHO05D005991 4.7e-145 518.1 297 89.9
PGR102G2346 Punica granatum HOM05D004740 ORTHO05D005991 4.7e-145 518.1 297 89.6
Gorai.003G150000 Gossypium raimondii HOM05D004740 ORTHO05D005991 6.1e-145 517.7 297 89.9
Manes.18G127700 Manihot esculenta HOM05D004740 ORTHO05D005991 6.1e-145 517.7 297 89.6
Prupe.6G048900 Prunus persica HOM05D004740 ORTHO05D005991 1.0e-144 516.9 297 88.9
Duzib168G1324 Durio zibethinus HOM05D004740 ORTHO05D005991 1.4e-144 516.5 297 89.6
Ciclev10028558m.g Citrus clementina HOM05D004740 ORTHO05D005991 3.0e-144 515.4 297 89.2
Glyma.18G057700 Glycine max HOM05D004740 ORTHO05D005991 4.0e-144 515.0 297 89.6
TAR633G1387 Trochodendron aralioides HOM05D004740 ORTHO05D005991 4.0e-144 515.0 297 90.2
CsaV3_1G036540 Cucumis sativus L. HOM05D004740 ORTHO05D005991 5.2e-144 514.6 297 88.9
Migut.N00764 Erythranthe guttata HOM05D004740 ORTHO05D005991 6.8e-144 514.2 297 90.2
Sed0001589 Sechium edule HOM05D004740 ORTHO05D005991 6.8e-144 514.2 297 88.2
Lj6g0008641 Lotus japonicus HOM05D004740 ORTHO05D005991 1.2e-143 513.5 297 88.2
ATR0594G208 Amborella trichopoda HOM05D004740 ORTHO05D005991 2.6e-143 512.3 297 89.2
Ca_15002_v3 Cicer arietinum L. HOM05D004740 ORTHO05D005991 4.4e-143 511.5 297 87.2
Eucgr.J01859 Eucalyptus grandis HOM05D004740 ORTHO05D005991 4.4e-143 511.5 297 88.2
Potri.009G077800 Populus trichocarpa HOM05D004740 ORTHO05D005991 4.4e-143 511.5 297 88.9
MELO3C020514.2 Cucumis melo HOM05D004740 ORTHO05D005991 5.7e-143 511.1 297 87.9
TWI75G0989 Tripterygium wilfordii HOM05D004740 ORTHO05D005991 5.7e-143 511.1 297 87.9
DCAR_018228 Daucus carota HOM05D004740 ORTHO05D005991 9.8e-143 510.4 297 88.6
Sc12g0002010 Simmondsia chinensis HOM05D004740 ORTHO05D005991 9.8e-143 510.4 297 88.6
Sp4g12790 Schrenkiella parvula HOM05D004740 ORTHO05D005991 1.3e-142 510.0 297 88.6
Aqoxy2G00789 Aquilegia oxysepala HOM05D004740 ORTHO05D005991 2.8e-142 508.8 297 89.2
MD03G1055800 Malus domestica HOM05D004740 ORTHO05D005991 2.8e-142 508.8 297 88.2
RcHm_v2.0_Chr5g0071571 Rosa chinensis HOM05D004740 ORTHO05D005991 2.8e-142 508.8 297 86.9
CARHR123500 Cardamine hirsuta HOM05D004740 ORTHO05D005991 3.7e-142 508.4 297 88.2
HanXRQChr01g0012131 Helianthus annuus HOM05D004740 ORTHO05D005991 3.7e-142 508.4 297 88.2
Hund29009 Selenicereus undatus HOM05D004740 ORTHO05D005991 3.7e-142 508.4 297 87.9
Hund29013 Selenicereus undatus HOM05D004740 ORTHO05D005991 3.7e-142 508.4 297 87.9
Medtr3g031380 Medicago truncatula HOM05D004740 ORTHO05D005991 4.9e-142 508.1 297 86.9
FvH4_3g39690 Fragaria vesca HOM05D004740 ORTHO05D005991 6.3e-142 507.7 297 86.9
Psat5g153440 Pisum sativum HOM05D004740 ORTHO05D005991 6.3e-142 507.7 297 86.5
CiPaw.14G054500 Carya illinoinensis HOM05D004740 ORTHO05D005991 1.1e-141 506.9 297 86.5
Thhalv10016751m.g Eutrema salsugineum HOM05D004740 ORTHO05D005991 1.1e-141 506.9 297 88.2
AL4G25030 Arabidopsis lyrata HOM05D004740 ORTHO05D005991 1.4e-141 506.5 297 87.9
MD11G1056800 Malus domestica HOM05D004740 ORTHO05D005991 1.4e-141 506.5 297 87.9
Lalb_Chr18g0051371 Lupinus albus HOM05D004740 ORTHO05D005991 1.8e-141 506.1 297 87.2
Os03g0297400 Oryza sativa ssp. japonica HOM05D004740 ORTHO05D005991 1.8e-141 506.1 297 87.2
THA.LOC104826277 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 1.8e-141 506.1 297 86.9
AT2G30200 Arabidopsis thaliana HOM05D004740 ORTHO05D005991 2.4e-141 505.8 297 87.9
TPR.G35611 Trifolium pratense HOM05D004740 ORTHO05D005991 4.1e-141 505.0 297 85.9
BraA04t17832Z Brassica rapa HOM05D004740 ORTHO05D005991 5.4e-141 504.6 297 87.5
CDE06G2756 Ceratophyllum demersum HOM05D004740 ORTHO05D005991 5.4e-141 504.6 297 87.5
Glyma.11G164500 Glycine max HOM05D004740 ORTHO05D005991 5.4e-141 504.6 297 86.9
C04p59110 Brassica napus HOM05D004740 ORTHO05D005991 7.0e-141 504.2 297 87.5
BolC4t27422H Brassica oleracea HOM05D004740 ORTHO05D005991 7.0e-141 504.2 297 87.5
Carub.0004s1135 Capsella rubella HOM05D004740 ORTHO05D005991 7.0e-141 504.2 297 87.9
THA.LOC104800771 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 7.0e-141 504.2 297 87.5
Sabra09G0059400 Salix brachista HOM05D004740 ORTHO05D005991 1.6e-140 503.1 297 87.5
PSO339G6109 Papaver somniferum HOM05D004740 ORTHO05D005991 2.0e-140 502.7 297 88.2
unitig_60.g25555 Utricularia gibba HOM05D004740 ORTHO05D005991 2.0e-140 502.7 297 86.5
Ah.15g096090 Amaranthus hybridus HOM05D004740 ORTHO05D005991 2.7e-140 502.3 297 86.9
CANSAT54G2578 Cannabis sativa HOM05D004740 ORTHO05D005991 3.5e-140 501.9 297 86.2
ECA248G3413 Erigeron canadensis HOM05D004740 ORTHO05D005991 3.5e-140 501.9 297 86.9
Phvul.006G073300 Phaseolus vulgaris HOM05D004740 ORTHO05D005991 3.5e-140 501.9 297 86.5
EL10Ac7g15913 Beta vulgaris HOM05D004740 ORTHO05D005991 5.9e-140 501.1 297 86.9
BcaB02g10307 Brassica carinata HOM05D004740 ORTHO05D005991 7.7e-140 500.7 297 86.9
Lalb_Chr15g0083211 Lupinus albus HOM05D004740 ORTHO05D005991 7.7e-140 500.7 297 86.2
ClCG03G000380 Citrullus lanatus HOM05D004740 ORTHO05D005991 1.0e-139 500.4 330 80.6
BcaC02g08041 Brassica carinata HOM05D004740 ORTHO05D005991 1.3e-139 500.0 297 86.5
A05p15240 Brassica napus HOM05D004740 ORTHO05D005991 1.3e-139 500.0 298 87.2
BolC3t14364H Brassica oleracea HOM05D004740 ORTHO05D005991 1.3e-139 500.0 297 86.5
BraA05t20443Z Brassica rapa HOM05D004740 ORTHO05D005991 1.3e-139 500.0 298 87.2
PSO801G0690 Papaver somniferum HOM05D004740 ORTHO05D005991 1.3e-139 500.0 297 87.9
Aa31LG5G6500 Aethionema arabicum HOM05D004740 ORTHO05D005991 2.3e-139 499.2 306 85.0
VMungo0540G0639 Vigna mungo HOM05D004740 ORTHO05D005991 3.8e-139 498.4 297 86.5
BcaC02g11103 Brassica carinata HOM05D004740 ORTHO05D005991 5.0e-139 498.0 297 86.5
C04p20390 Brassica napus HOM05D004740 ORTHO05D005991 5.0e-139 498.0 298 86.9
BolC4t23568H Brassica oleracea HOM05D004740 ORTHO05D005991 5.0e-139 498.0 298 86.9
AUR62001878 Chenopodium quinoa HOM05D004740 ORTHO05D005991 1.5e-138 496.5 297 85.5
BcaB01g04122 Brassica carinata HOM05D004740 ORTHO05D005991 1.9e-138 496.1 297 86.5
FAN25G0671 Fragaria x ananassa HOM05D004740 ORTHO05D005991 2.5e-138 495.7 320 80.9
BcaB06g28350 Brassica carinata HOM05D004740 ORTHO05D005991 4.3e-138 495.0 297 85.5
FAN11G1726 Fragaria x ananassa HOM05D004740 ORTHO05D005991 5.6e-138 494.6 320 80.6
FAN16G0900 Fragaria x ananassa HOM05D004740 ORTHO05D005991 5.6e-138 494.6 320 80.6
HPP92_013770 Vanilla planifolia HOM05D004740 ORTHO05D005991 7.3e-138 494.2 297 85.2
arahy.Tifrunner.gnm1.ann1.C8ZV0S Arachis hypogaea HOM05D004740 ORTHO05D005991 3.6e-137 491.9 307 84.4
AUR62009675 Chenopodium quinoa HOM05D004740 ORTHO05D005991 4.7e-137 491.5 297 84.2
FAN21G3316 Fragaria x ananassa HOM05D004740 ORTHO05D005991 6.1e-137 491.1 320 80.0
FAN21G3649 Fragaria x ananassa HOM05D004740 ORTHO05D005991 6.1e-137 491.1 320 80.0
Zm00001eb013760 Zea mays HOM05D004740 ORTHO05D005991 8.0e-137 490.7 297 83.8
HanXRQChr01g0012161 Helianthus annuus HOM05D004740 ORTHO05D005991 9.8e-135 483.8 297 85.5
Nn2g13251 Nelumbo nucifera HOM05D004740 ORTHO05D005991 1.3e-134 483.4 278 89.9
MBI05_g35601_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D005991 3.7e-134 481.9 297 85.9
SEGI_23058 Sequoiadendron giganteum HOM05D004740 ORTHO05D005991 5.6e-130 468.0 297 81.5
Mapoly0009s0078 Marchantia polymorpha HOM05D004740 ORTHO05D005991 2.3e-128 462.6 297 80.5
Lsat_1_v5_gn_5_174621 Lactuca sativa HOM05D004740 ORTHO05D005991 1.2e-127 460.3 324 75.9
Pp3c20_19160 Physcomitrium patens HOM05D004740 ORTHO05D005991 1.2e-127 460.3 298 81.2
Actinidia32613 Actinidia chinensis HOM05D004740 ORTHO05D005991 1.9e-125 453.0 297 81.8
BcaC01g06023 Brassica carinata HOM05D004740 ORTHO05D005991 2.7e-124 449.1 297 80.8
Sed0003355 Sechium edule HOM05D004740 ORTHO05D005991 7.8e-124 447.6 277 83.0
AagrBONN_evm.TU.Sc2ySwM_228.2654 Anthoceros agrestis HOM05D004740 ORTHO05D005991 5.6e-122 441.4 289 77.2
Cpa.g.sc2.364 Carica papaya HOM05D004740 ORTHO05D005991 7.5e-119 431.0 246 91.1
arahy.Tifrunner.gnm1.ann1.R7F6LC Arachis hypogaea HOM05D004740 ORTHO05D005991 1.1e-117 427.2 272 83.1
A04p22970 Brassica napus HOM05D004740 ORTHO05D005991 7.1e-117 424.5 262 84.7
SHI19203 Sapria himalayana HOM05D004740 ORTHO05D005991 1.6e-116 423.3 344 67.7
SMO200G0259 Selaginella moellendorffii HOM05D004740 ORTHO05D005991 7.8e-116 421.0 298 72.5
C03p19860 Brassica napus HOM05D004740 ORTHO05D005991 2.3e-115 419.5 248 86.7
Atru.chr3.4126 Acer truncatum HOM05D004740 ORTHO05D005991 2.6e-111 406.0 303 73.3
Cre14.g621650 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 4.6e-108 395.2 298 70.1
PRCOL_00005899 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 1.7e-107 393.3 279 71.0
Nn2g10995 Nelumbo nucifera HOM05D004740 ORTHO05D005991 7.1e-101 371.3 297 71.4
CBR_g33923 Chara braunii HOM05D004740 ORTHO05D005991 8.7e-99 364.4 303 63.4
GSVIVG01024639001 Vitis vinifera HOM05D004740 ORTHO05D005991 2.9e-94 349.4 198 92.9
Potri.001G282600 Populus trichocarpa HOM05D004740 ORTHO05D005991 3.2e-93 345.9 242 75.2
MCO01G413 Micromonas commoda HOM05D004740 ORTHO05D005991 5.1e-91 338.6 299 60.5
A03p16880 Brassica napus HOM05D004740 ORTHO05D005991 6.9e-80 301.6 198 80.8
BraA03t10976Z Brassica rapa HOM05D004740 ORTHO05D005991 6.9e-80 301.6 198 80.8
Oeu005355.3 Olea europaea HOM05D003290 ORTHO05D005991 3.9e-75 285.8 161 90.1
PRCOL_00000466 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 6.5e-62 241.9 287 46.3
Actinidia23202 Actinidia chinensis HOM05D004740 ORTHO05D005991 4.2e-61 239.2 297 52.2
Actinidia02620 Actinidia chinensis HOM05D004740 ORTHO05D005991 5.9e-55 218.8 154 77.3
MCO04G051 Micromonas commoda HOM05D004740 ORTHO05D005991 2.9e-54 216.5 286 43.7
Cre02.g088250 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 2.6e-50 203.4 317 40.7
Nitab4.5_0006359g0020 Nicotiana tabacum HOM05D004740 ORTHO05D005991 5.7e-50 202.2 178 64.6
GSVIVG01024638001 Vitis vinifera HOM05D004740 ORTHO05D005991 1.2e-44 184.5 99 91.9
Nitab4.5_0000644g0120 Nicotiana tabacum HOM05D004740 ORTHO05D005991 3.5e-39 166.4 149 62.4
Nitab4.5_0006126g0030 Nicotiana tabacum HOM05D004740 ORTHO05D005991 1.0e-38 164.9 213 50.2
COL.COLO4_24546 Corchorus olitorius HOM05D004740 ORTHO05D008255 4.2e-37 159.5 161 59.6
Zm00001eb396720 Zea mays HOM05D004740 ORTHO05D444996 8.5e-30 135.2 80 85.0
MBI10_g37352_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D241996 1.2e-18 98.2 75 70.7
Oeu025052.1 Olea europaea HOM05D004740 ORTHO05D005991 2.0e-18 97.4 51 90.2
HPP92_013838 Vanilla planifolia HOM05D004740 ORTHO05D005991 2.7e-15 87.0 51 78.4
Nitab4.5_0000644g0100 Nicotiana tabacum HOM05D004740 ORTHO05D284956 2.3e-14 84.0 48 87.5
HPP92_012003 Vanilla planifolia HOM05D004740 ORTHO05D429499 1.9e-13 80.9 90 52.2
VMungo0331G0938 Vigna mungo HOM05D000577 ORTHO05D001093 2.1e-12 77.4 64 65.6
MBI15_g35007_MAGBIO Magnolia biondii HOM05D000363 ORTHO05D017376 4.4e-10 69.7 43 81.4
Carub.0004s1136 Capsella rubella HOM05D004740 ORTHO05D005991 7.5e-10 68.9 42 73.8


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