Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 5.5e-209 730.7 368 100.0
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 2.5e-169 599.0 398 76.1
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.9e-164 582.8 397 73.6
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.9e-164 582.8 397 73.6
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 1.0e-162 577.0 383 75.7
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 1.2e-160 570.1 398 72.9
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 1.6e-160 569.7 352 80.1
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 3.6e-160 568.5 397 71.0
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 6.2e-160 567.8 397 70.8
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 8.1e-160 567.4 398 71.9
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 8.1e-160 567.4 397 71.0
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 2.4e-159 565.8 397 70.3
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 4.0e-159 565.1 397 70.5
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 5.2e-159 564.7 397 70.5
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 8.9e-159 563.9 397 71.3
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 8.9e-159 563.9 398 72.6
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 1.2e-158 563.5 398 70.6
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 1.2e-158 563.5 398 71.1
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 2.0e-158 562.8 397 70.3
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 4.4e-158 561.6 397 70.3
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 4.4e-158 561.6 397 71.5
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 7.6e-158 560.8 398 70.4
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.3e-157 560.1 398 70.4
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 1.3e-157 560.1 397 69.8
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 1.7e-157 559.7 397 70.8
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.9e-157 558.9 398 70.1
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 2.9e-157 558.9 397 71.0
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 2.9e-157 558.9 397 71.0
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 1.1e-156 557.0 397 70.3
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 3.2e-156 555.4 397 69.0
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 3.2e-156 555.4 397 69.8
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 3.2e-156 555.4 397 69.8
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 7.1e-156 554.3 401 71.1
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 7.1e-156 554.3 397 70.8
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 9.2e-156 553.9 398 69.6
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 2.1e-155 552.7 397 69.0
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 4.6e-155 551.6 398 70.1
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 6.0e-155 551.2 397 69.5
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 2.3e-154 549.3 398 68.3
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 3.0e-154 548.9 401 69.1
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 3.0e-154 548.9 398 68.3
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 5.1e-154 548.1 404 68.8
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 5.1e-154 548.1 428 68.7
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.5e-153 546.6 397 67.8
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 1.9e-153 546.2 398 69.1
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 5.6e-153 544.7 398 68.6
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 1.2e-152 543.5 398 69.3
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 2.8e-152 542.3 397 67.5
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 4.7e-152 541.6 397 67.5
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 1.8e-151 539.7 399 68.4
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 2.4e-151 539.3 397 67.3
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 4.4e-150 535.0 397 67.5
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 3.8e-149 531.9 398 66.3
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 4.9e-149 531.6 398 65.1
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 1.1e-148 530.4 345 75.4
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 1.4e-148 530.0 397 66.2
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 5.4e-148 528.1 397 66.0
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 7.1e-148 527.7 398 66.6
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 2.1e-147 526.2 397 65.7
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 7.8e-147 524.2 358 73.7
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 7.8e-147 524.2 397 67.5
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 1.3e-146 523.5 398 65.6
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 1.1e-145 520.4 397 64.5
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.9e-145 519.6 401 64.8
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 1.6e-144 516.5 397 64.0
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 1.6e-144 516.5 398 63.8
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 2.8e-144 515.8 373 68.9
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 4.5e-142 508.4 374 67.6
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 5.8e-142 508.1 398 63.3
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 5.8e-142 508.1 398 63.3
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 4.9e-141 505.0 398 63.6
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 1.9e-140 503.1 373 67.6
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 2.4e-140 502.7 399 62.9
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 4.2e-140 501.9 398 62.8
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 9.3e-140 500.7 398 62.3
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.9e-137 493.0 398 61.3
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 2.8e-136 489.2 397 62.0
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 3.7e-136 488.8 397 61.2
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.5e-134 483.4 398 60.6
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 2.6e-134 482.6 403 59.8
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 1.9e-132 476.5 368 66.0
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 1.3e-130 470.3 397 58.4
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 5.1e-130 468.4 399 59.9
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 8.7e-130 467.6 404 56.9
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 1.9e-129 466.5 399 57.4
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 2.5e-129 466.1 404 56.9
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 1.3e-128 463.8 404 55.9
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 1.3e-128 463.8 404 55.9
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.8e-128 462.6 403 56.1
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 1.4e-127 460.3 404 56.2
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 5.3e-127 458.4 404 55.7
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 5.3e-127 458.4 401 56.9
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 1.2e-126 457.2 402 56.2
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 1.2e-126 457.2 401 56.9
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 1.0e-125 454.1 401 55.1
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 5.1e-122 441.8 400 56.2
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 4.8e-120 435.3 401 54.6
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 9.1e-111 404.4 256 76.6
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 5.9e-110 401.7 397 53.4
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 7.0e-87 325.1 342 50.3
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 1.2e-86 324.3 397 42.3
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 1.4e-79 300.8 310 49.4
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.8e-79 300.4 340 50.9
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 2.7e-78 296.6 229 66.4
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 1.6e-70 270.8 397 37.5
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 4.6e-54 216.1 171 63.7
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 8.6e-45 185.3 397 30.0
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 2.8e-43 180.3 228 46.5
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 2.8e-43 180.3 395 29.9
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 1.4e-42 177.9 228 46.9
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.3e-40 171.4 144 61.1
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 2.1e-38 164.1 139 61.9
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 3.9e-37 159.8 139 61.2
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 4.0e-26 123.2 103 56.3
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 1.2e-25 121.7 103 56.3
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 2.6e-25 120.6 130 48.5
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 3.8e-24 116.7 109 57.8
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 6.7e-21 105.9 143 42.0
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 4.6e-14 83.2 184 32.1


User provided reference genes

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