Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g14580 Coffea canephora HOM05D010709 ORTHO05D010376 3.6e-141 505.0 267 100.0
PGSC0003DMG400039556 Solanum tuberosum HOM05D010709 ORTHO05D010376 4.2e-17 92.8 144 43.1
Sopen03g007660 Solanum pennellii HOM05D010709 ORTHO05D010376 3.4e-14 83.2 142 39.4
CAN.G1095.11 Capsicum annuum HOM05D010709 ORTHO05D010376 2.4e-12 77.0 135 37.8
MELO3C020524.2 Cucumis melo HOM05D039867 ORTHO05D010376 1.2e-11 74.7 102 41.2
Manes.18G136300 Manihot esculenta HOM05D011591 ORTHO05D010376 1.2e-11 74.7 138 35.5
PGSC0003DMG400030371 Solanum tuberosum HOM05D010709 ORTHO05D010376 2.0e-11 73.9 148 35.1
SGA_v2.0_scaffold54G19473 Striga asiatica HOM05D010709 ORTHO05D010376 2.0e-11 73.9 129 39.5
Sed0000970 Sechium edule HOM05D011591 ORTHO05D010376 2.7e-11 73.6 101 41.6
Hma1.2p1_1974F.1_g309630 Hydrangea macrophylla HOM05D010709 ORTHO05D010376 1.3e-10 71.2 151 35.8
Thecc.09G353600 Theobroma cacao HOM05D020455 ORTHO05D010376 2.9e-10 70.1 109 38.5
Potri.009G075000 Populus trichocarpa HOM05D020455 ORTHO05D010376 7.2e-09 65.5 110 36.4
Rhsim13G0066500 Rhododendron simsii HOM05D010709 ORTHO05D010376 7.2e-09 65.5 246 29.3
Sabra09G0056900 Salix brachista HOM05D011591 ORTHO05D010376 7.2e-09 65.5 101 36.6
A10p28930 Brassica napus HOM05D011591 ORTHO05D010376 9.4e-09 65.1 93 44.1
BraA10t44940Z Brassica rapa HOM05D011591 ORTHO05D010376 9.4e-09 65.1 93 44.1
Rhsim01G0239200 Rhododendron simsii HOM05D010709 ORTHO05D010376 9.4e-09 65.1 258 29.8
C09p69280 Brassica napus HOM05D011591 ORTHO05D010376 1.2e-08 64.7 93 43.0
BolC9t59672H Brassica oleracea HOM05D011591 ORTHO05D010376 1.2e-08 64.7 93 43.0
Nitab4.5_0006308g0030 Nicotiana tabacum HOM05D010709 ORTHO05D010376 1.2e-08 64.7 77 51.9
Actinidia32624 Actinidia chinensis HOM05D010709 ORTHO05D010376 2.1e-08 63.9 104 43.3
Nitab4.5_0002043g0040 Nicotiana tabacum HOM05D010709 ORTHO05D010376 2.1e-08 63.9 73 53.4
Cfa011740 Carpinus fangiana HOM05D028161 ORTHO05D010376 1.0e-07 61.6 237 30.0
Haze_24379 Corylus avellana HOM05D028161 ORTHO05D010376 1.0e-07 61.6 229 28.8
AL6G17350 Arabidopsis lyrata HOM05D011591 ORTHO05D010376 1.4e-07 61.2 97 42.3
CSS0033974 Camellia sinensis var. sinensis HOM05D010709 ORTHO05D010376 4.0e-07 59.7 74 41.9
THA.LOC104810699 Tarenaya hassleriana HOM05D011591 ORTHO05D010376 4.0e-07 59.7 102 37.3
Gohir.A05G107850 Gossypium hirsutum HOM05D020455 ORTHO05D010376 5.2e-07 59.3 93 34.4
Peaxi162Scf00540g00020 Petunia axillaris HOM05D010709 ORTHO05D010376 8.8e-07 58.5 69 50.7
FvH4_3g39200 Fragaria vesca HOM05D040535 ORTHO05D010376 1.2e-06 58.2 123 35.0
FAN11G1101 Fragaria x ananassa HOM05D008445 ORTHO05D010376 1.2e-06 58.2 123 35.0
FAN21G0777 Fragaria x ananassa HOM05D002172 ORTHO05D010376 1.5e-06 57.8 123 35.0
Sp6g35750 Schrenkiella parvula HOM05D011591 ORTHO05D010376 2.0e-06 57.4 93 38.7
Gorai.009G112200 Gossypium raimondii HOM05D020455 ORTHO05D010376 3.4e-06 56.6 107 29.9
Gohir.D05G108050 Gossypium hirsutum HOM05D020455 ORTHO05D010376 4.4e-06 56.2 107 29.9
Carub.0006s0608 Capsella rubella HOM05D011591 ORTHO05D010376 7.5e-06 55.5 97 37.1
Glyma.14G197200 Glycine max HOM05D012059 ORTHO05D013484 9.8e-06 55.1 93 36.6


User provided reference genes

Program Settings