Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 2.8e-83 312.0 166 100.0
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 5.5e-31 138.3 174 52.9
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 5.5e-31 138.3 174 52.9
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 5.5e-31 138.3 174 52.9
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 1.2e-30 137.1 170 52.9
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 3.3e-28 129.0 167 49.1
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 5.7e-28 128.3 171 49.7
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 7.4e-28 127.9 172 51.2
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 7.4e-28 127.9 174 47.7
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 1.3e-27 127.1 168 52.4
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.7e-27 125.6 174 47.1
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 3.1e-26 122.5 167 52.1
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 4.0e-26 122.1 136 54.4
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 4.0e-26 122.1 172 47.1
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 5.3e-26 121.7 136 53.7
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 5.3e-26 121.7 174 47.7
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 2.0e-25 119.8 170 47.1
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 2.6e-25 119.4 170 46.5
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.4e-25 119.0 171 47.4
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 4.5e-25 118.6 131 55.7
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 7.6e-25 117.9 144 54.2
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 7.6e-25 117.9 173 50.9
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 7.6e-25 117.9 158 54.4
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.0e-24 117.5 168 44.6
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.0e-24 117.5 168 44.6
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.0e-24 117.5 141 51.8
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 1.7e-24 116.7 160 46.9
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 1.7e-24 116.7 169 50.3
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 1.7e-24 116.7 161 49.7
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 2.2e-24 116.3 176 46.6
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 6.5e-24 114.8 160 46.2
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 6.5e-24 114.8 157 47.1
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 6.5e-24 114.8 175 47.4
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 8.4e-24 114.4 93 66.7
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 8.4e-24 114.4 118 60.2
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 8.4e-24 114.4 158 48.7
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 1.1e-23 114.0 173 46.2
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 1.9e-23 113.2 176 47.7
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 1.9e-23 113.2 167 47.9
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 2.5e-23 112.8 141 50.4
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 7.1e-23 111.3 180 47.2
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 7.1e-23 111.3 178 40.4
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 9.3e-23 110.9 128 54.7
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 6.1e-22 108.2 177 45.2
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 1.0e-21 107.5 171 44.4
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 3.0e-21 105.9 165 43.6
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 3.9e-21 105.5 176 45.5
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 5.1e-21 105.1 119 52.1
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 1.5e-20 103.6 179 44.1
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 1.5e-20 103.6 175 42.3
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.9e-20 103.2 163 44.8
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 1.9e-20 103.2 172 45.9
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 2.5e-20 102.8 150 49.3
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 3.3e-20 102.4 96 62.5
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 5.7e-20 101.7 97 59.8
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 7.4e-20 101.3 148 51.4
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.3e-19 100.5 163 44.2
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 1.3e-19 100.5 93 62.4
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 1.6e-19 100.1 184 40.8
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 1.4e-18 97.1 179 44.7
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 1.8e-18 96.7 160 45.0
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 2.4e-18 96.3 97 63.9
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 2.4e-18 96.3 152 48.7
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 3.1e-18 95.9 165 43.6
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 3.1e-18 95.9 164 45.1
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 9.0e-18 94.4 82 64.6
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 9.0e-18 94.4 82 64.6
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 9.0e-18 94.4 82 64.6
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 1.2e-17 94.0 157 42.7
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 1.5e-17 93.6 159 43.4
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 2.0e-17 93.2 83 62.7
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 2.0e-17 93.2 172 43.6
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 2.6e-17 92.8 126 51.6
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 3.4e-17 92.4 83 61.4
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 5.9e-17 91.7 154 42.2
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 1.0e-16 90.9 158 41.8
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 1.7e-16 90.1 142 43.0
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 2.2e-16 89.7 197 39.1
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 2.2e-16 89.7 74 73.0
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 8.5e-16 87.8 153 42.5
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 8.5e-16 87.8 169 43.8
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 1.1e-15 87.4 92 50.0
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 1.4e-15 87.0 187 36.9
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 1.9e-15 86.7 175 38.9
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 2.5e-15 86.3 169 41.4
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 5.5e-15 85.1 171 38.6
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 7.2e-15 84.7 97 52.6
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 2.1e-14 83.2 71 64.8
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 2.7e-14 82.8 112 46.4
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 7.9e-14 81.3 163 38.7
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 1.5e-12 77.0 166 38.0
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.0e-12 76.6 108 50.0
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 2.5e-12 76.3 105 46.7
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 4.3e-12 75.5 97 55.7
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 5.7e-12 75.1 155 34.8
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 9.7e-12 74.3 68 66.2
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 3.7e-11 72.4 92 46.7
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 8.2e-11 71.2 93 48.4
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 6.9e-10 68.2 158 36.7
Rhsim13G0078000 Rhododendron simsii HOM05D007264 ORTHO05D008639 3.4e-09 65.9 118 42.4
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 4.2e-07 58.9 126 39.7
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 7.2e-07 58.2 48 64.6
Mapoly0102s0035 Marchantia polymorpha HOM05D007264 ORTHO05D008639 7.9e-06 54.7 78 41.0
Pp3c15_10400 Physcomitrium patens HOM05D007264 ORTHO05D008639 7.9e-06 54.7 132 35.6


User provided reference genes

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