Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 9.3e-226 786.6 404 100.0
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 4.9e-142 508.4 430 63.0
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 2.3e-139 499.6 404 62.1
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 3.0e-139 499.2 410 61.5
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 8.1e-137 491.1 419 62.8
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 9.9e-135 484.2 408 60.3
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 6.4e-134 481.5 405 60.0
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 8.4e-134 481.1 419 60.1
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 1.9e-133 479.9 416 61.3
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 2.4e-133 479.6 406 60.8
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 7.1e-133 478.0 405 60.0
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 4.6e-132 475.3 411 61.3
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 3.0e-131 472.6 407 60.9
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 3.9e-131 472.2 406 62.8
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 2.5e-130 469.5 411 61.6
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 5.6e-130 468.4 407 61.4
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.6e-129 466.8 411 58.6
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 6.2e-129 464.9 410 61.0
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 8.1e-129 464.5 406 61.8
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 8.1e-129 464.5 418 60.8
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.4e-128 463.8 409 58.2
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 2.4e-128 463.0 404 61.9
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 4.0e-128 462.2 406 62.3
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 1.2e-127 460.7 412 60.2
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 1.5e-127 460.3 401 59.1
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 9.9e-127 457.6 408 58.1
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 1.3e-126 457.2 408 60.8
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 2.9e-126 456.1 404 59.2
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 8.4e-126 454.5 321 70.4
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 8.4e-126 454.5 359 63.8
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 1.4e-125 453.8 409 58.7
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 1.9e-125 453.4 407 58.2
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 1.2e-124 450.7 408 58.6
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 1.2e-124 450.7 287 72.8
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 3.5e-124 449.1 410 58.3
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 7.8e-124 448.0 400 58.0
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 1.3e-123 447.2 345 65.8
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 2.3e-123 446.4 401 57.6
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 3.9e-123 445.7 399 57.9
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 6.6e-123 444.9 408 60.3
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 1.1e-122 444.1 406 60.1
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.5e-122 443.7 411 59.6
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 5.6e-122 441.8 401 56.6
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 5.6e-122 441.8 408 57.6
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 5.6e-122 441.8 390 60.8
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 5.6e-122 441.8 404 57.9
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 4.8e-121 438.7 398 57.3
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 4.8e-121 438.7 324 66.4
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 1.8e-120 436.8 411 57.7
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 1.8e-120 436.8 271 74.9
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.4e-120 436.4 404 56.7
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 3.1e-120 436.0 408 59.6
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 6.9e-120 434.9 324 67.0
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 2.6e-119 433.0 408 58.3
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 4.5e-119 432.2 404 57.9
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 1.3e-118 430.6 406 55.9
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 1.7e-118 430.3 407 56.8
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 2.2e-118 429.9 320 68.8
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 5.4e-117 425.2 429 53.8
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 7.1e-117 424.9 385 57.1
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 1.2e-116 424.1 379 58.0
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 6.0e-116 421.8 389 58.6
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 1.0e-115 421.0 328 65.9
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 2.3e-115 419.9 401 56.4
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 3.9e-115 419.1 407 55.0
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 5.1e-115 418.7 404 55.7
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 8.7e-115 417.9 399 57.1
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.5e-114 416.4 358 61.2
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 1.3e-113 414.1 402 55.0
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 1.3e-113 414.1 402 55.0
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 2.1e-113 413.3 404 55.4
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 4.8e-113 412.1 396 54.0
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 1.8e-112 410.2 404 55.4
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 6.9e-112 408.3 407 54.3
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 6.9e-112 408.3 415 52.8
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 2.6e-111 406.4 404 54.7
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 2.6e-111 406.4 356 60.4
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 1.3e-110 404.1 404 55.0
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 1.3e-110 404.1 404 55.0
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 1.3e-110 404.1 404 55.0
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 1.7e-110 403.7 242 78.9
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 1.7e-110 403.7 322 65.8
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 2.9e-110 402.9 402 52.5
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 3.8e-110 402.5 395 54.7
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 1.9e-109 400.2 404 54.5
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 5.5e-109 398.7 402 54.5
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 6.0e-108 395.2 394 54.1
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 9.6e-106 387.9 318 57.9
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.7e-102 377.1 311 56.9
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 7.9e-100 368.2 215 81.4
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 1.0e-99 367.9 334 58.1
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 1.6e-97 360.5 329 56.8
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 6.9e-96 355.1 245 67.8
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.4e-93 347.4 335 55.5
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 1.1e-82 311.2 404 46.3
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 3.2e-69 266.5 404 41.8
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 3.3e-66 256.5 409 40.3
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 9.4e-61 238.4 148 72.3
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 1.0e-51 208.4 309 37.2
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 8.3e-49 198.7 290 38.3
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.7e-46 191.0 201 52.7
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 4.7e-44 183.0 129 68.2
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 4.7e-44 183.0 129 68.2
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 1.8e-43 181.0 296 36.1
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 2.0e-39 167.5 119 68.1
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 3.5e-39 166.8 272 36.4
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 6.2e-36 156.0 133 59.4
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 6.4e-33 146.0 157 49.0
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 1.4e-32 144.8 140 54.3
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 5.4e-32 142.9 97 73.2
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.7e-25 121.3 141 46.1
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 4.6e-23 113.2 246 30.5
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 7.3e-21 105.9 215 29.3
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 1.3e-09 68.6 94 46.8
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 1.3e-09 68.6 92 47.8
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 6.0e-07 59.7 211 27.5


User provided reference genes

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