Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g10730 Coffea canephora HOM05D004460 ORTHO05D005254 1.9e-192 675.6 334 100.0
MSTRG.19754 Avicennia marina HOM05D004460 ORTHO05D005254 3.5e-170 601.7 316 92.4
Solyc08g082840.3 Solanum lycopersicum HOM05D004460 ORTHO05D005254 4.3e-168 594.7 324 91.0
Sopen08g031070 Solanum pennellii HOM05D004460 ORTHO05D005254 4.3e-168 594.7 324 91.0
Cfa020869 Carpinus fangiana HOM05D004460 ORTHO05D005254 9.6e-168 593.6 316 92.1
Hma1.2p1_2380F.1_g320963 Hydrangea macrophylla HOM05D004460 ORTHO05D005254 1.2e-167 593.2 311 92.9
Prupe.6G004900 Prunus persica HOM05D004460 ORTHO05D005254 1.6e-167 592.8 316 91.8
Migut.J01586 Erythranthe guttata HOM05D004460 ORTHO05D005254 2.8e-167 592.0 316 91.1
Actinidia37745 Actinidia chinensis HOM05D004460 ORTHO05D005254 4.7e-167 591.3 316 91.1
MBI01_g34901_MAGBIO Magnolia biondii HOM05D004460 ORTHO05D005254 4.7e-167 591.3 328 88.4
Duzib150G0635 Durio zibethinus HOM05D004460 ORTHO05D005254 1.1e-166 590.1 311 92.3
Lj1A198T34 Lonicera japonica HOM05D004460 ORTHO05D005254 1.1e-166 590.1 316 90.2
Aqoxy3G02716 Aquilegia oxysepala HOM05D004460 ORTHO05D005254 1.8e-166 589.3 316 91.1
Dinv32698 Davidia involucrata HOM05D004460 ORTHO05D005254 1.8e-166 589.3 316 91.5
Thecc.09G346400 Theobroma cacao HOM05D004460 ORTHO05D005254 2.4e-166 589.0 311 92.9
Potri.016G130000 Populus trichocarpa HOM05D004460 ORTHO05D005254 3.1e-166 588.6 316 89.6
QL02p091680 Quercus lobata HOM05D004460 ORTHO05D005254 3.1e-166 588.6 314 91.7
Sc04g0002220 Simmondsia chinensis HOM05D004460 ORTHO05D005254 3.1e-166 588.6 316 89.9
Nitab4.5_0002151g0070 Nicotiana tabacum HOM05D004460 ORTHO05D005254 5.2e-166 587.8 351 84.6
QL02p091623 Quercus lobata HOM05D004460 ORTHO05D005254 6.8e-166 587.4 314 91.7
Manes.04G016600 Manihot esculenta HOM05D004460 ORTHO05D005254 8.9e-166 587.0 316 91.1
FvH4_3g45430 Fragaria vesca HOM05D004460 ORTHO05D005254 1.5e-165 586.3 316 90.5
RcHm_v2.0_Chr5g0083231 Rosa chinensis HOM05D004460 ORTHO05D005254 1.5e-165 586.3 316 90.5
GSVIVG01024777001 Vitis vinifera HOM05D004460 ORTHO05D005254 2.6e-165 585.5 316 89.9
PSO675G8453 Papaver somniferum HOM05D004460 ORTHO05D005254 4.4e-165 584.7 316 89.9
unitig_899.g14459 Utricularia gibba HOM05D004460 ORTHO05D005254 4.4e-165 584.7 316 91.1
TWI79G0138 Tripterygium wilfordii HOM05D004460 ORTHO05D005254 5.8e-165 584.3 313 91.1
Ciclev10001076m.g Citrus clementina HOM05D004460 ORTHO05D005254 7.6e-165 583.9 313 90.7
SGA_v2.0_scaffold66G22336 Striga asiatica HOM05D004460 ORTHO05D005254 7.6e-165 583.9 316 89.9
Hund03380 Selenicereus undatus HOM05D004460 ORTHO05D005254 9.9e-165 583.6 316 90.5
CiPaw.16G116700 Carya illinoinensis HOM05D004460 ORTHO05D005254 1.7e-164 582.8 316 90.8
Actinidia03999 Actinidia chinensis HOM05D004460 ORTHO05D005254 2.2e-164 582.4 316 90.2
Gohir.A03G031600 Gossypium hirsutum HOM05D004460 ORTHO05D005254 2.9e-164 582.0 311 91.3
Gohir.D03G136700 Gossypium hirsutum HOM05D004460 ORTHO05D005254 3.8e-164 581.6 311 91.0
Gorai.003G143800 Gossypium raimondii HOM05D004460 ORTHO05D005254 3.8e-164 581.6 311 91.0
Nn1g07453 Nelumbo nucifera HOM05D004460 ORTHO05D005254 3.8e-164 581.6 316 90.2
CsaV3_1G042370 Cucumis sativus L. HOM05D004460 ORTHO05D005254 8.4e-164 580.5 316 89.2
Haze_19298 Corylus avellana HOM05D004460 ORTHO05D005254 1.1e-163 580.1 308 92.5
MD11G1007700 Malus domestica HOM05D004460 ORTHO05D005254 1.1e-163 580.1 306 92.5
Atru.chr3.3576 Acer truncatum HOM05D004460 ORTHO05D005254 1.9e-163 579.3 314 89.5
ECA248G3543 Erigeron canadensis HOM05D004460 ORTHO05D005254 1.9e-163 579.3 317 89.9
Lsat_1_v5_gn_1_77661 Lactuca sativa HOM05D004460 ORTHO05D005254 4.2e-163 578.2 315 89.5
DCAR_003960 Daucus carota HOM05D004460 ORTHO05D005254 1.2e-162 576.6 316 89.6
Glyma.20G052000 Glycine max HOM05D004460 ORTHO05D005254 1.2e-162 576.6 321 87.5
CANSAT11G2169 Cannabis sativa HOM05D004460 ORTHO05D005254 6.0e-162 574.3 311 90.4
Lj3g0001995 Lotus japonicus HOM05D004460 ORTHO05D005254 6.0e-162 574.3 316 88.3
MD11G1006700 Malus domestica HOM05D004460 ORTHO05D005254 1.0e-161 573.5 306 92.2
HanXRQChr01g0023931 Helianthus annuus HOM05D004460 ORTHO05D005254 1.7e-161 572.8 306 92.2
Sed0018938 Sechium edule HOM05D004460 ORTHO05D005254 1.7e-161 572.8 316 88.0
ATR0315G079 Amborella trichopoda HOM05D004460 ORTHO05D005254 3.0e-161 572.0 321 87.2
Phvul.005G132400 Phaseolus vulgaris HOM05D004460 ORTHO05D005254 3.0e-161 572.0 316 88.6
Nitab4.5_0004436g0010 Nicotiana tabacum HOM05D004460 ORTHO05D005254 1.5e-160 569.7 304 93.1
Ah.10g034870 Amaranthus hybridus HOM05D004460 ORTHO05D005254 3.3e-160 568.5 309 90.6
FvH4_6g19460 Fragaria vesca HOM05D004460 ORTHO05D005254 4.3e-160 568.2 333 84.7
vmacro21498 Vaccinium macrocarpon HOM05D004460 ORTHO05D005254 7.3e-160 567.4 370 78.1
Lalb_Chr14g0374551 Lupinus albus HOM05D004460 ORTHO05D005254 9.6e-160 567.0 316 86.4
CANSAT11G0913 Cannabis sativa HOM05D004460 ORTHO05D005254 1.3e-159 566.6 311 89.4
THA.LOC104799510 Tarenaya hassleriana HOM05D004460 ORTHO05D005254 2.1e-159 565.8 311 87.8
arahy.Tifrunner.gnm1.ann1.B5CH19 Arachis hypogaea HOM05D004460 ORTHO05D005254 2.8e-159 565.5 316 86.7
arahy.Tifrunner.gnm1.ann1.NXCQ1Z Arachis hypogaea HOM05D004460 ORTHO05D005254 2.8e-159 565.5 316 86.7
Cpa.g.sc65.21 Carica papaya HOM05D004460 ORTHO05D005254 4.8e-159 564.7 311 88.7
Os07g0270950 Oryza sativa ssp. japonica HOM05D004460 ORTHO05D005254 6.2e-159 564.3 311 88.4
Psat5g279520 Pisum sativum HOM05D004460 ORTHO05D005254 8.1e-159 563.9 313 88.5
TPR.G11585 Trifolium pratense HOM05D004460 ORTHO05D005254 8.1e-159 563.9 312 89.1
EL10Ac2g03980 Beta vulgaris HOM05D004460 ORTHO05D005254 1.4e-158 563.1 308 89.6
Eucgr.J00902 Eucalyptus grandis HOM05D004460 ORTHO05D005254 1.4e-158 563.1 317 86.4
arahy.Tifrunner.gnm1.ann1.N29Z6M Arachis hypogaea HOM05D004460 ORTHO05D005254 2.4e-158 562.4 316 86.1
Thhalv10002532m.g Eutrema salsugineum HOM05D004460 ORTHO05D005254 3.1e-158 562.0 311 88.4
Aa31sc412G40 Aethionema arabicum HOM05D004460 ORTHO05D005254 5.3e-158 561.2 311 88.4
AL5G23600 Arabidopsis lyrata HOM05D004460 ORTHO05D005254 6.9e-158 560.8 316 87.3
AT3G45100 Arabidopsis thaliana HOM05D004460 ORTHO05D005254 6.9e-158 560.8 316 87.3
HPP92_024369 Vanilla planifolia HOM05D004460 ORTHO05D005254 9.0e-158 560.5 310 88.4
Carub.0005s1090 Capsella rubella HOM05D004460 ORTHO05D005254 1.2e-157 560.1 316 87.0
Sp6g40060 Schrenkiella parvula HOM05D004460 ORTHO05D005254 1.5e-157 559.7 311 88.1
CDE04G3212 Ceratophyllum demersum HOM05D004460 ORTHO05D005254 2.0e-157 559.3 311 87.5
Zm00001eb097230 Zea mays HOM05D004460 ORTHO05D005254 2.0e-157 559.3 311 87.5
TPR.G11973 Trifolium pratense HOM05D004460 ORTHO05D005254 4.4e-157 558.1 316 87.0
BcaC06g31990 Brassica carinata HOM05D004460 ORTHO05D005254 1.7e-156 556.2 312 87.2
Ca_25732_v3 Cicer arietinum L. HOM05D004460 ORTHO05D005254 1.1e-155 553.5 314 86.3
Medtr2g095220 Medicago truncatula HOM05D004460 ORTHO05D005254 1.4e-155 553.1 315 87.6
BraA10t45351Z Brassica rapa HOM05D004460 ORTHO05D005254 2.7e-154 548.9 307 87.9
A10p33230 Brassica napus HOM05D004460 ORTHO05D005254 6.0e-154 547.7 307 87.6
C09p74140 Brassica napus HOM05D004460 ORTHO05D005254 6.0e-154 547.7 307 87.6
BolC9t60146H Brassica oleracea HOM05D004460 ORTHO05D005254 6.0e-154 547.7 307 87.6
Peaxi162Scf00503g00426 Petunia axillaris HOM05D004460 ORTHO05D005254 3.0e-153 545.4 308 89.0
Glyma.13G182200 Glycine max HOM05D004460 ORTHO05D005254 5.1e-153 544.7 311 85.5
Lalb_Chr16g0383601 Lupinus albus HOM05D004460 ORTHO05D005254 4.3e-152 541.6 311 84.9
Medtr4g089065 Medicago truncatula HOM05D004460 ORTHO05D005254 2.8e-151 538.9 320 84.4
Rhsim03G0064700 Rhododendron simsii HOM05D004460 ORTHO05D005254 3.4e-149 531.9 292 88.4
SHI20353 Sapria himalayana HOM05D004460 ORTHO05D005254 1.7e-148 529.6 294 87.8
Pp3c16_10880 Physcomitrium patens HOM05D004460 ORTHO05D005254 3.8e-148 528.5 314 82.2
arahy.Tifrunner.gnm1.ann1.MW8ZKL Arachis hypogaea HOM05D004460 ORTHO05D005254 4.9e-148 528.1 316 82.0
arahy.Tifrunner.gnm1.ann1.HPBL6V Arachis hypogaea HOM05D004460 ORTHO05D005254 6.4e-148 527.7 316 81.6
Oeu022026.1 Olea europaea HOM05D004460 ORTHO05D005254 9.3e-147 523.9 270 94.8
CSS0019934 Camellia sinensis var. sinensis HOM05D004460 ORTHO05D005254 1.0e-145 520.4 280 92.1
AUR62009232 Chenopodium quinoa HOM05D004460 ORTHO05D005254 3.0e-145 518.8 282 87.6
Mapoly0056s0054 Marchantia polymorpha HOM05D004460 ORTHO05D005254 5.6e-144 514.6 315 77.5
TAR624G1319 Trochodendron aralioides HOM05D004460 ORTHO05D005254 9.6e-144 513.8 273 93.0
SMO353G0094 Selaginella moellendorffii HOM05D004460 ORTHO05D005254 2.8e-143 512.3 306 80.1
FAN11G0550 Fragaria x ananassa HOM05D004460 ORTHO05D005254 6.9e-142 507.7 270 90.0
FAN16G0028 Fragaria x ananassa HOM05D004460 ORTHO05D005254 6.9e-142 507.7 270 90.0
FAN21G3501 Fragaria x ananassa HOM05D004460 ORTHO05D005254 6.9e-142 507.7 270 90.0
ClCG03G013680 Citrullus lanatus HOM05D004460 ORTHO05D005254 1.5e-141 506.5 276 90.6
Psat7g112240 Pisum sativum HOM05D004460 ORTHO05D005254 7.6e-141 504.2 292 85.6
TAR626G0869 Trochodendron aralioides HOM05D004460 ORTHO05D005254 1.0e-140 503.8 324 79.0
CARHR150840 Cardamine hirsuta HOM05D004460 ORTHO05D005254 2.9e-140 502.3 285 86.3
PGSC0003DMG400012127 Solanum tuberosum HOM05D004460 ORTHO05D005254 2.9e-140 502.3 260 93.8
MELO3C015670.2 Cucumis melo HOM05D004460 ORTHO05D005254 4.9e-140 501.5 270 88.5
VMungo1080G0188 Vigna mungo HOM05D004460 ORTHO05D005254 8.4e-140 500.7 319 79.6
AUR62040232 Chenopodium quinoa HOM05D004460 ORTHO05D005254 4.6e-138 495.0 270 87.0
arahy.Tifrunner.gnm1.ann1.QEP9US Arachis hypogaea HOM05D004460 ORTHO05D005254 2.3e-137 492.7 285 85.3
Phvul.002G226400 Phaseolus vulgaris HOM05D004460 ORTHO05D005254 5.1e-137 491.5 311 78.1
AagrBONN_evm.TU.Sc2ySwM_344.3907 Anthoceros agrestis HOM05D004460 ORTHO05D005254 6.7e-137 491.1 321 73.8
Ca_01392_v3 Cicer arietinum L. HOM05D004460 ORTHO05D005254 9.3e-131 470.7 263 90.9
Zm00001eb322240 Zea mays HOM05D004460 ORTHO05D005254 1.3e-129 466.8 266 86.5
CBR_g8747 Chara braunii HOM05D004460 ORTHO05D005254 5.1e-129 464.9 312 72.8
Sabra16G0128800 Salix brachista HOM05D004460 ORTHO05D005254 1.8e-121 439.9 230 90.9
Actinidia03889 Actinidia chinensis HOM05D004460 ORTHO05D005254 5.1e-121 438.3 316 70.9
Peaxi162Scf00073g01829 Petunia axillaris HOM05D004460 ORTHO05D005254 3.3e-120 435.6 232 91.4
SEGI_40785 Sequoiadendron giganteum HOM05D004460 ORTHO05D005254 1.8e-118 429.9 269 79.6
BcaNung02130 Brassica carinata HOM05D004460 ORTHO05D005254 2.0e-117 426.4 245 86.9
VMungo0251G0290 Vigna mungo HOM05D004460 ORTHO05D005254 7.4e-112 407.9 231 84.0
arahy.Tifrunner.gnm1.ann1.TK1EDX Arachis hypogaea HOM05D004460 ORTHO05D005254 2.2e-108 396.4 248 80.6
Atru.chr3.596 Acer truncatum HOM05D004460 ORTHO05D005254 8.0e-106 387.9 272 74.3
Cre01.g006800 Chlamydomonas reinhardtii HOM05D004460 ORTHO05D005254 2.6e-104 382.9 325 59.1
Lj4A675G47 Lonicera japonica HOM05D004460 ORTHO05D005254 2.7e-98 362.8 225 80.9
MCO11G325 Micromonas commoda HOM05D004460 ORTHO05D005254 1.0e-97 360.9 325 56.9
COL.COLO4_18287 Corchorus olitorius HOM05D004460 ORTHO05D005254 2.3e-97 359.8 198 90.9
Lj4A665T31 Lonicera japonica HOM05D004460 ORTHO05D005254 6.8e-97 358.2 196 87.2
Cfa022887 Carpinus fangiana HOM05D004460 ORTHO05D005254 5.7e-96 355.1 339 53.7
Haze_27141 Corylus avellana HOM05D004460 ORTHO05D005254 1.3e-95 354.0 297 58.6
Prupe.6G143200 Prunus persica HOM05D004460 ORTHO05D005254 2.2e-92 343.2 257 72.8
arahy.Tifrunner.gnm1.ann1.XS4KTC Arachis hypogaea HOM05D004460 ORTHO05D005254 1.3e-87 327.4 183 82.5
arahy.Tifrunner.gnm1.ann1.X9KU0H Arachis hypogaea HOM05D004460 ORTHO05D005254 2.7e-85 319.7 212 75.0
arahy.Tifrunner.gnm1.ann1.RT1NLW Arachis hypogaea HOM05D004460 ORTHO05D005254 7.7e-85 318.2 203 82.3
PRCOL_00000052 Prasinoderma coloniale HOM05D004460 ORTHO05D005254 8.9e-81 304.7 351 47.6
MD03G1005200 Malus domestica HOM05D004460 ORTHO05D005254 7.0e-78 295.0 204 74.5
BolC2t06047H Brassica oleracea HOM05D004460 ORTHO05D005254 3.1e-73 279.6 171 83.6
MSTRG.17732 Avicennia marina HOM05D004460 ORTHO05D005254 4.4e-64 249.2 140 83.6
BcaB05g21890 Brassica carinata HOM05D004460 ORTHO05D005254 1.0e-52 211.5 142 77.5
C02p00470 Brassica napus HOM05D004460 ORTHO05D005254 1.9e-51 207.2 208 55.3
HPP92_027906 Vanilla planifolia HOM05D004460 ORTHO05D005254 9.6e-43 178.3 172 60.5
FAN25G0085 Fragaria x ananassa HOM05D004460 ORTHO05D005254 6.9e-41 172.2 152 63.2
Hma1.2p1_1786F.1_g302290 Hydrangea macrophylla HOM05D004460 ORTHO05D005254 6.7e-36 155.6 85 90.6
BraA02t04718Z Brassica rapa HOM05D004460 ORTHO05D005254 1.4e-30 137.9 89 78.7
MD03G1005100 Malus domestica HOM05D004460 ORTHO05D005254 3.4e-24 116.7 57 93.0
Medtr2g047140 Medicago truncatula HOM05D004460 ORTHO05D005254 5.5e-22 109.4 91 60.4
Carub.0004s0823 Capsella rubella HOM05D004460 ORTHO05D005254 3.0e-20 103.6 75 72.0
arahy.Tifrunner.gnm1.ann1.U8K6WM Arachis hypogaea HOM05D004460 ORTHO05D005254 9.6e-19 98.6 61 83.6
HPP92_024473 Vanilla planifolia HOM05D004460 ORTHO05D005254 1.3e-15 88.2 77 64.9
FAN23G3015 Fragaria x ananassa HOM05D004460 ORTHO05D005254 3.6e-13 80.1 42 81.0
AT1G73160 Arabidopsis thaliana HOM05D002124 ORTHO05D004058 3.9e-12 76.6 315 27.0
AL2G32910 Arabidopsis lyrata HOM05D002124 ORTHO05D004058 2.4e-09 67.4 312 26.0
Nn1g09042 Nelumbo nucifera HOM05D002124 ORTHO05D004058 6.9e-09 65.9 159 32.1
VMungo0251G0332 Vigna mungo HOM05D004460 ORTHO05D005254 6.5e-07 59.3 34 88.2
Potri.009G038400 Populus trichocarpa HOM05D002124 ORTHO05D009549 9.4e-06 55.5 331 23.0


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