Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 1.1e-104 383.3 193 100.0
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 1.2e-69 266.9 189 72.5
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 2.9e-68 262.3 183 71.6
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 4.2e-67 258.5 192 69.3
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 9.4e-67 257.3 195 66.7
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 1.4e-65 253.4 195 65.6
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 3.0e-65 252.3 188 67.0
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 2.8e-63 245.7 195 65.1
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 1.8e-62 243.0 173 72.3
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 9.1e-62 240.7 170 70.6
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 4.5e-61 238.4 176 69.9
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 1.0e-60 237.3 168 72.0
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 2.2e-60 236.1 198 63.6
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 8.5e-60 234.2 194 63.9
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.9e-59 233.0 197 62.4
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 6.1e-58 228.0 197 62.9
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 1.0e-57 227.3 170 71.2
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.8e-57 226.5 180 64.4
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 2.3e-57 226.1 173 71.1
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 3.0e-57 225.7 177 64.4
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.5e-56 223.4 175 65.1
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 2.6e-56 222.6 173 67.6
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 4.4e-56 221.9 173 64.2
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 1.7e-55 219.9 206 59.7
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 6.3e-55 218.0 173 64.2
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 3.1e-54 215.7 170 63.5
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 1.6e-53 213.4 163 69.3
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 1.0e-52 210.7 170 62.4
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.3e-52 210.3 172 60.5
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 1.7e-52 209.9 179 62.0
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 5.0e-52 208.4 175 62.3
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 8.5e-52 207.6 171 60.8
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 1.1e-51 207.2 177 61.6
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 3.2e-51 205.7 168 60.7
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 4.2e-51 205.3 173 59.0
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 1.6e-50 203.4 171 59.6
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 2.7e-50 202.6 179 58.1
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 6.1e-50 201.4 168 58.9
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 8.0e-50 201.1 172 60.5
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 1.4e-49 200.3 175 62.3
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 6.8e-49 198.0 171 62.6
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 3.4e-48 195.7 175 60.6
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 1.7e-47 193.4 171 58.5
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 2.8e-47 192.6 169 60.4
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 2.8e-47 192.6 166 56.0
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 3.7e-47 192.2 169 60.4
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 1.1e-46 190.7 171 55.6
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 9.1e-46 187.6 172 55.8
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 2.0e-45 186.4 172 54.7
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 3.5e-45 185.7 173 54.3
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 4.5e-45 185.3 158 62.0
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 8.5e-44 181.0 169 53.8
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 1.1e-43 180.6 174 54.6
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 3.2e-43 179.1 167 55.7
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 7.2e-43 177.9 119 71.4
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 1.6e-42 176.8 203 49.8
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 4.7e-42 175.3 170 56.5
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 1.0e-41 174.1 158 54.4
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 1.0e-41 174.1 160 55.0
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 4.0e-41 172.2 177 48.6
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 6.8e-41 171.4 168 56.0
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 8.8e-41 171.0 162 53.1
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 3.4e-40 169.1 174 50.6
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 7.5e-40 167.9 166 51.8
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 1.8e-38 163.3 144 56.2
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 2.4e-38 162.9 164 50.0
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 2.0e-37 159.8 166 50.0
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 2.0e-37 159.8 166 50.0
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 2.7e-37 159.5 168 50.0
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 2.7e-37 159.5 169 51.5
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 4.5e-37 158.7 163 50.9
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 5.9e-37 158.3 161 52.2
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 7.7e-37 157.9 168 49.4
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 7.7e-37 157.9 168 49.4
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 1.7e-36 156.8 161 50.9
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 1.7e-36 156.8 168 48.8
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 3.8e-36 155.6 161 52.2
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 5.0e-36 155.2 142 59.9
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 8.6e-36 154.5 161 50.3
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 1.5e-35 153.7 161 50.9
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 1.6e-34 150.2 158 49.4
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.6e-34 150.2 168 50.0
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 2.1e-34 149.8 160 49.4
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 4.0e-33 145.6 98 71.4
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 1.5e-32 143.7 170 46.5
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 2.0e-32 143.3 170 45.3
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 2.8e-31 139.4 152 50.0
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 8.3e-31 137.9 174 45.4
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 3.2e-30 136.0 165 45.5
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 7.0e-30 134.8 151 46.4
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 7.0e-30 134.8 165 44.2
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 2.7e-29 132.9 160 46.2
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.7e-28 130.2 165 44.2
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 1.2e-21 107.5 118 49.2
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 1.0e-20 104.4 138 39.1
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 9.5e-19 97.8 94 55.3
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 9.5e-19 97.8 117 44.4
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 3.1e-17 92.8 95 50.5
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 4.0e-17 92.4 71 64.8
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 1.2e-16 90.9 109 41.3
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 1.7e-12 77.0 49 77.6
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 8.9e-09 64.7 49 59.2
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 1.4e-06 57.4 36 69.4


User provided reference genes

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