Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 0.0e+00 1075.8 548 100.0
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 2.3e-155 553.1 521 58.3
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 3.0e-142 509.6 511 54.4
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 1.5e-141 507.3 522 52.9
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 9.9e-138 494.6 534 52.2
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.3e-137 494.2 505 54.7
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 2.7e-135 486.5 503 53.9
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 1.7e-134 483.8 521 53.2
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 1.7e-134 483.8 522 51.3
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 2.3e-134 483.4 522 51.1
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 8.7e-134 481.5 510 52.9
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 1.5e-133 480.7 459 57.1
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 2.5e-133 479.9 519 53.8
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 2.5e-133 479.9 521 52.8
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 3.3e-133 479.6 545 50.1
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 2.1e-132 476.9 484 54.8
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 4.8e-132 475.7 526 52.5
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 6.2e-132 475.3 528 52.5
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 1.1e-131 474.6 538 51.7
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 1.4e-131 474.2 541 50.6
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 1.4e-131 474.2 529 51.6
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 2.4e-131 473.4 519 52.4
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 2.4e-131 473.4 521 50.1
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 3.1e-131 473.0 523 51.1
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 9.0e-131 471.5 520 51.5
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 9.0e-131 471.5 524 50.4
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 1.5e-130 470.7 509 51.3
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 1.5e-130 470.7 542 49.4
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 2.0e-130 470.3 506 50.6
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 4.5e-130 469.2 519 52.2
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 5.8e-130 468.8 540 50.2
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 7.6e-130 468.4 522 53.4
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 9.9e-130 468.0 527 51.4
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 1.1e-128 464.5 466 56.4
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 1.1e-128 464.5 506 50.2
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 1.1e-128 464.5 518 51.2
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 4.2e-128 462.6 527 51.8
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 5.5e-128 462.2 523 51.4
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 1.6e-127 460.7 530 50.8
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 6.0e-127 458.8 515 50.7
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 1.0e-126 458.0 501 49.7
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 2.3e-126 456.8 510 52.7
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 3.9e-126 456.1 521 49.9
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 3.9e-126 456.1 521 49.1
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 6.7e-126 455.3 499 50.7
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 8.7e-126 454.9 515 50.7
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 1.3e-124 451.1 477 53.0
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.7e-124 449.5 552 49.3
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 4.8e-124 449.1 529 50.5
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 4.8e-124 449.1 518 49.2
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 7.6e-122 441.8 570 48.1
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 3.8e-121 439.5 525 49.5
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 3.8e-121 439.5 506 48.6
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 8.4e-121 438.3 500 49.2
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 1.1e-120 438.0 542 47.4
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 1.1e-120 438.0 517 49.7
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 1.9e-120 437.2 589 45.7
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 5.5e-120 435.6 539 47.5
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 5.5e-120 435.6 530 46.8
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 7.1e-120 435.3 513 48.7
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 7.1e-120 435.3 554 46.9
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 9.3e-120 434.9 530 49.2
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 9.3e-120 434.9 508 50.2
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 1.6e-119 434.1 531 48.2
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 6.0e-119 432.2 525 48.0
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 1.8e-118 430.6 517 47.4
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 6.7e-118 428.7 510 47.8
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 1.9e-117 427.2 576 45.0
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 2.5e-117 426.8 478 52.5
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 4.8e-116 422.5 506 46.8
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 6.3e-116 422.2 496 50.8
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 2.4e-115 420.2 508 47.8
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 4.1e-115 419.5 522 48.1
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 7.6e-114 415.2 393 54.2
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 1.7e-113 414.1 508 47.0
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.2e-112 409.8 457 50.3
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.2e-112 409.8 457 50.3
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 2.7e-111 406.8 511 46.8
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 7.9e-111 405.2 481 47.6
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 1.3e-110 404.4 409 55.7
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 6.7e-110 402.1 468 50.2
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 2.5e-109 400.2 528 44.5
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 3.3e-109 399.8 533 45.4
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 8.2e-108 395.2 535 44.7
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 1.7e-105 387.5 387 58.1
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 8.5e-105 385.2 499 47.9
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 2.8e-100 370.2 532 43.0
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.5e-98 364.4 358 56.4
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 3.4e-98 363.2 535 43.4
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 1.2e-95 354.8 511 41.1
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 3.7e-92 343.2 582 39.7
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 8.5e-89 332.0 449 44.5
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 5.5e-88 329.3 419 47.7
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 4.0e-86 323.2 364 50.0
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 9.7e-85 318.5 547 38.6
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 2.2e-84 317.4 547 38.8
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 3.2e-80 303.5 520 39.2
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 2.2e-76 290.8 519 39.3
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 8.3e-68 262.3 373 41.0
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 4.0e-62 243.4 196 62.2
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 4.0e-62 243.4 513 34.7
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 5.7e-61 239.6 394 37.6
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 5.7e-61 239.6 351 39.9
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 3.4e-53 213.8 407 33.4
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 5.8e-45 186.4 172 54.7
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 2.1e-42 177.9 273 43.2
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.7e-41 174.9 222 49.1
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 9.5e-40 169.1 229 46.7
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 6.2e-39 166.4 212 47.6
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 6.8e-38 162.9 190 45.3
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 6.9e-30 136.3 162 45.7
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 5.8e-29 133.3 197 43.1
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 2.3e-17 94.7 301 25.2
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.8e-14 85.1 72 55.6
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 7.6e-13 79.7 169 36.1
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 3.8e-12 77.4 127 37.0
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 2.7e-10 71.2 129 36.4
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 4.6e-10 70.5 65 60.0
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.5e-08 65.5 70 47.1
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 9.6e-08 62.8 89 40.4
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 6.2e-07 60.1 119 36.1
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 1.1e-06 59.3 33 78.8
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 6.9e-06 56.6 117 34.2


User provided reference genes

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