Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 1.2e-58 229.6 106 100.0
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 2.3e-43 178.7 106 75.5
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 2.6e-42 175.3 106 76.4
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 3.4e-42 174.9 106 72.6
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 3.4e-42 174.9 105 75.2
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 1.3e-41 172.9 106 73.6
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 2.2e-41 172.2 106 72.6
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 2.2e-41 172.2 106 71.7
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 6.3e-41 170.6 106 74.5
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 8.3e-41 170.2 106 74.5
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 1.1e-40 169.9 106 71.7
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 1.1e-40 169.9 106 72.6
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 1.4e-40 169.5 106 70.8
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 1.8e-40 169.1 100 72.0
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 1.8e-40 169.1 106 70.8
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 5.4e-40 167.5 106 74.5
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 7.0e-40 167.2 101 73.3
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 2.0e-39 165.6 100 74.0
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 5.9e-39 164.1 106 67.9
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 1.3e-38 162.9 95 74.7
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 2.3e-38 162.2 95 73.7
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 2.3e-38 162.2 91 79.1
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 8.6e-38 160.2 95 73.7
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 1.1e-37 159.8 93 74.2
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 1.1e-37 159.8 105 66.7
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 1.1e-37 159.8 106 67.9
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 1.9e-37 159.1 107 68.2
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.9e-37 159.1 105 70.5
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 1.9e-37 159.1 106 68.9
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 3.3e-37 158.3 106 67.9
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 4.3e-37 157.9 100 70.0
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 5.6e-37 157.5 126 60.3
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 5.6e-37 157.5 105 69.5
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 5.6e-37 157.5 100 69.0
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 9.5e-37 156.8 100 68.0
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 3.6e-36 154.8 95 70.5
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 3.6e-36 154.8 99 66.7
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 4.7e-36 154.5 106 63.2
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 8.0e-36 153.7 100 67.0
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 8.0e-36 153.7 105 69.5
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 5.2e-35 151.0 106 64.2
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 6.8e-35 150.6 105 63.8
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 1.2e-34 149.8 106 65.1
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 1.5e-34 149.4 94 69.1
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 2.0e-34 149.1 104 66.3
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 3.4e-34 148.3 107 63.6
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 4.4e-34 147.9 95 67.4
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 5.7e-34 147.5 107 63.6
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 1.3e-33 146.4 98 65.3
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 4.9e-33 144.4 105 61.9
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 6.4e-33 144.1 102 60.8
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 6.4e-33 144.1 102 62.7
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 6.4e-33 144.1 102 62.7
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 6.4e-33 144.1 100 61.0
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 8.3e-33 143.7 107 61.7
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 1.1e-32 143.3 95 65.3
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 1.4e-32 142.9 95 62.1
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 1.8e-32 142.5 105 61.0
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 2.4e-32 142.1 103 60.2
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 3.2e-32 141.7 113 61.9
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 9.2e-32 140.2 98 63.3
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 9.2e-32 140.2 102 61.8
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 1.2e-31 139.8 105 60.0
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 1.2e-31 139.8 105 61.0
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.6e-31 139.4 102 61.8
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 1.6e-31 139.4 90 70.0
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 1.6e-31 139.4 107 59.8
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 3.5e-31 138.3 105 59.0
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 4.6e-31 137.9 105 60.0
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.6e-31 137.9 102 60.8
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 5.9e-31 137.5 104 58.7
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.3e-30 136.3 102 59.8
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.3e-30 136.3 101 61.4
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.3e-30 136.3 101 61.4
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 1.7e-30 136.0 105 58.1
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 3.9e-30 134.8 105 58.1
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 3.9e-30 134.8 108 58.3
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 5.0e-30 134.4 105 61.0
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 5.0e-30 134.4 108 58.3
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 1.5e-29 132.9 122 51.6
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 1.5e-29 132.9 122 51.6
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 4.3e-29 131.3 122 50.8
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 5.6e-29 131.0 120 52.5
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 9.5e-29 130.2 78 75.6
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.6e-28 129.4 75 76.0
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.1e-28 129.0 102 57.8
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.8e-28 128.6 106 56.6
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 2.8e-28 128.6 79 72.2
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 3.6e-28 128.3 124 50.8
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 3.6e-28 128.3 75 76.0
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 4.7e-28 127.9 122 50.8
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 4.7e-28 127.9 79 67.1
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 8.0e-28 127.1 92 59.8
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 1.0e-27 126.7 97 56.7
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 3.1e-27 125.2 103 53.4
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 5.2e-27 124.4 105 57.1
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 6.8e-27 124.0 105 57.1
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 6.8e-27 124.0 90 56.7
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.5e-26 122.9 92 58.7
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 2.6e-26 122.1 127 47.2
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.6e-26 122.1 89 59.6
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 4.4e-26 121.3 74 71.6
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 7.5e-26 120.6 134 46.3
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 2.9e-25 118.6 77 64.9
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 5.4e-24 114.4 99 48.5
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 7.0e-24 114.0 78 62.8
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 1.6e-23 112.8 92 55.4
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.0e-23 112.5 78 64.1
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 2.7e-23 112.1 75 66.7
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 3.5e-23 111.7 78 65.4
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 6.0e-23 110.9 93 51.6
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 8.6e-22 107.1 73 69.9
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 1.1e-21 106.7 73 64.4
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.9e-21 105.9 70 61.4
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 3.3e-21 105.1 55 80.0
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 5.6e-21 104.4 70 68.6
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 2.1e-20 102.4 61 72.1
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 1.1e-19 100.1 77 58.4
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 5.2e-19 97.8 74 62.2
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 1.5e-18 96.3 122 41.0
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 2.2e-17 92.4 74 60.8
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 1.5e-13 79.7 92 41.3
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 1.2e-12 76.6 45 66.7
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 1.5e-10 69.7 45 64.4
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 1.5e-10 69.7 88 33.0
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 3.4e-10 68.6 40 72.5
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 2.9e-09 65.5 40 67.5
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 5.1e-06 54.7 52 48.1


User provided reference genes

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