Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 8.2e-200 700.3 378 100.0
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 3.6e-147 525.4 329 75.7
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 2.2e-144 516.2 334 73.4
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 4.9e-144 515.0 333 73.0
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 8.3e-144 514.2 334 73.4
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.1e-143 513.8 331 73.1
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.1e-143 513.8 331 73.1
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 7.1e-143 511.1 334 73.4
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 2.1e-142 509.6 332 72.0
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.1e-142 509.6 327 72.2
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 7.8e-142 507.7 325 70.8
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 1.7e-141 506.5 332 70.8
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 5.1e-141 505.0 328 72.9
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 1.5e-140 503.4 325 70.8
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 3.3e-140 502.3 325 72.0
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 9.5e-140 500.7 335 70.7
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 2.1e-139 499.6 329 70.8
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 2.8e-139 499.2 325 71.1
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 2.8e-139 499.2 327 70.9
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 3.6e-139 498.8 323 72.1
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 3.6e-139 498.8 331 70.4
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 1.1e-138 497.3 332 69.6
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 1.1e-138 497.3 328 70.7
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 1.1e-138 497.3 323 69.7
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 1.4e-138 496.9 321 71.7
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.8e-138 496.5 345 70.4
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 3.1e-138 495.7 330 70.3
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 4.0e-138 495.4 333 68.8
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 5.2e-138 495.0 330 70.0
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 6.8e-138 494.6 326 71.2
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 6.8e-138 494.6 323 70.6
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 6.8e-138 494.6 356 68.5
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 1.2e-137 493.8 325 70.2
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 1.2e-137 493.8 333 71.2
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 1.2e-137 493.8 339 67.8
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 7.6e-137 491.1 329 69.6
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 1.3e-136 490.3 333 70.9
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 1.7e-136 490.0 324 71.0
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 2.9e-136 489.2 328 70.4
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 2.9e-136 489.2 330 70.0
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 2.9e-136 489.2 333 69.1
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 3.8e-136 488.8 331 68.9
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 4.9e-136 488.4 325 69.2
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 4.9e-136 488.4 325 70.8
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 4.9e-136 488.4 313 74.8
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 6.4e-136 488.0 326 69.9
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 1.1e-135 487.3 330 69.4
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.4e-135 486.9 323 70.0
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 1.9e-135 486.5 327 71.6
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 5.4e-135 485.0 325 69.8
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 7.1e-135 484.6 329 69.3
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 9.2e-135 484.2 325 69.8
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 1.2e-134 483.8 326 70.2
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 1.6e-134 483.4 323 67.2
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.6e-134 483.4 325 68.6
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 4.6e-134 481.9 330 69.4
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 6.0e-134 481.5 311 69.8
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 7.8e-134 481.1 333 70.6
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 1.0e-133 480.7 331 67.7
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.7e-133 479.9 336 68.2
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 1.7e-133 479.9 331 67.7
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 6.6e-133 478.0 321 71.0
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 6.6e-133 478.0 332 67.8
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.5e-132 476.9 336 67.9
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 4.3e-132 475.3 333 67.9
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 9.6e-132 474.2 330 68.5
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.2e-131 473.8 309 69.3
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 2.1e-131 473.0 325 68.3
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 2.8e-131 472.6 331 67.4
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 4.7e-131 471.9 324 69.4
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 8.1e-131 471.1 338 65.7
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 1.1e-130 470.7 325 68.9
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 1.1e-130 470.7 330 66.4
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 2.4e-130 469.5 327 67.6
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 6.9e-130 468.0 330 67.3
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 8.9e-130 467.6 322 67.4
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 1.5e-129 466.8 323 68.1
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 1.5e-129 466.8 323 68.1
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 1.5e-129 466.8 328 67.1
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 5.8e-129 464.9 332 65.7
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 2.9e-128 462.6 330 66.7
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 2.9e-128 462.6 330 66.7
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 8.4e-128 461.1 330 66.4
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 8.4e-128 461.1 307 69.1
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 5.4e-127 458.4 312 67.6
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 7.1e-127 458.0 328 65.9
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 2.1e-126 456.4 331 65.3
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 4.6e-126 455.3 333 63.7
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 6.0e-126 454.9 329 64.4
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 5.3e-122 441.8 441 52.6
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 5.3e-122 441.8 334 63.5
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 1.7e-120 436.8 320 62.8
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.7e-120 436.8 296 68.6
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 2.9e-120 436.0 321 62.9
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 2.4e-119 433.0 318 65.4
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 1.3e-117 427.2 330 61.5
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 1.1e-114 417.5 286 66.4
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 1.5e-108 397.1 313 62.0
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 1.9e-108 396.7 330 60.6
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 7.1e-103 378.3 330 54.8
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 1.2e-102 377.5 261 69.3
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 1.5e-97 360.5 333 52.6
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.3e-96 357.5 248 64.9
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 6.7e-93 345.1 322 53.1
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 7.2e-87 325.1 317 50.5
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.2e-86 324.3 317 50.2
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 3.9e-85 319.3 225 67.6
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 1.9e-39 167.5 325 37.8
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.1e-37 161.8 99 65.7
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 8.3e-35 152.1 94 74.5
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 3.7e-27 126.7 131 51.9
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 9.5e-23 112.1 64 71.9
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 4.7e-22 109.8 76 63.2
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.3e-19 101.7 270 27.0
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 6.4e-19 99.4 49 91.8
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.7e-16 91.3 51 84.3
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 1.1e-13 82.0 53 67.9
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 7.6e-12 75.9 127 35.4


User provided reference genes

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