Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g08560 Coffea canephora HOM05D002687 ORTHO05D044678 2.9e-120 435.3 221 100.0
Nn6g34716 Nelumbo nucifera HOM05D002687 ORTHO05D002052 1.4e-10 70.9 218 28.4
MELO3C014517.2 Cucumis melo HOM05D002687 ORTHO05D002052 2.1e-09 67.0 205 26.3
CiPaw.13G131000 Carya illinoinensis HOM05D002687 ORTHO05D002052 4.6e-09 65.9 202 27.7
CsaV3_6G038540 Cucumis sativus L. HOM05D002687 ORTHO05D002052 4.6e-09 65.9 205 24.9
CiPaw.14G095600 Carya illinoinensis HOM05D002687 ORTHO05D002052 6.0e-09 65.5 211 25.1
CiPaw.14G095800 Carya illinoinensis HOM05D002687 ORTHO05D002052 6.0e-09 65.5 211 25.1
Nitab4.5_0000158g0010 Nicotiana tabacum HOM05D002687 ORTHO05D002052 6.0e-09 65.5 170 28.2
PSO384G1068 Papaver somniferum HOM05D002687 ORTHO05D002052 6.0e-09 65.5 171 27.5
TAR369G0448 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.8e-09 65.1 208 26.4
TAR633G0261 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.8e-09 65.1 207 28.5
Nn2g14281 Nelumbo nucifera HOM05D002687 ORTHO05D002052 1.0e-08 64.7 191 23.6
Nitab4.5_0000893g0110 Nicotiana tabacum HOM05D002687 ORTHO05D002052 1.0e-08 64.7 170 27.6
Sed0009075 Sechium edule HOM05D002687 ORTHO05D002052 1.3e-08 64.3 209 27.8
PSO339G2661 Papaver somniferum HOM05D002687 ORTHO05D002052 2.3e-08 63.5 171 27.5
Solyc06g074050.3 Solanum lycopersicum HOM05D002687 ORTHO05D002052 2.3e-08 63.5 190 24.7
Sopen06g030470 Solanum pennellii HOM05D002687 ORTHO05D002052 2.3e-08 63.5 190 24.7
ClCG02G022410 Citrullus lanatus HOM05D002687 ORTHO05D002052 3.0e-08 63.2 189 25.9
PGSC0003DMG400005897 Solanum tuberosum HOM05D002687 ORTHO05D002052 3.9e-08 62.8 188 24.5
Potri.006G204000 Populus trichocarpa HOM05D008136 ORTHO05D002052 5.1e-08 62.4 217 22.6
Dinv17088 Davidia involucrata HOM05D002687 ORTHO05D002052 6.6e-08 62.0 174 25.9
CiPaw.14G095400 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.1e-07 61.2 211 25.6
CsaV3_3G037890 Cucumis sativus L. HOM05D008136 ORTHO05D002052 1.1e-07 61.2 174 25.3
MSTRG.21015 Avicennia marina HOM05D002687 ORTHO05D002052 1.5e-07 60.8 169 26.6
Haze_23313 Corylus avellana HOM05D002687 ORTHO05D002052 1.9e-07 60.5 174 26.4
DCAR_010643 Daucus carota HOM05D002687 ORTHO05D002052 2.5e-07 60.1 172 26.2
Cfa009948 Carpinus fangiana HOM05D002687 ORTHO05D002052 3.3e-07 59.7 174 27.0
Oeu035585.1 Olea europaea HOM05D002687 ORTHO05D044678 3.3e-07 59.7 113 30.1
CSS0030865 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 5.6e-07 58.9 169 27.2
CSS0032031 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 5.6e-07 58.9 169 27.2
PGSC0003DMG400019632 Solanum tuberosum HOM05D002687 ORTHO05D002052 5.6e-07 58.9 170 25.9
Dinv08137 Davidia involucrata HOM05D002687 ORTHO05D002052 7.3e-07 58.5 178 24.7
TAR623G0011 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.3e-07 58.5 186 28.0
Solyc11g068900.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 9.6e-07 58.2 171 25.1
Sopen11g027610 Solanum pennellii HOM05D002687 ORTHO05D002052 9.6e-07 58.2 171 25.1
MELO3C009533.2 Cucumis melo HOM05D008136 ORTHO05D002052 1.6e-06 57.4 174 25.3
Nn2g14283 Nelumbo nucifera HOM05D002687 ORTHO05D002052 1.6e-06 57.4 189 25.4
QL01p011302 Quercus lobata HOM05D002687 ORTHO05D002052 1.6e-06 57.4 182 23.6
AUR62023990 Chenopodium quinoa HOM05D002687 ORTHO05D002052 2.1e-06 57.0 167 25.7
AUR62031792 Chenopodium quinoa HOM05D002687 ORTHO05D002052 2.1e-06 57.0 167 25.7
Duzib168G2137 Durio zibethinus HOM05D002687 ORTHO05D002052 2.8e-06 56.6 206 26.7
Duzib106G1810 Durio zibethinus HOM05D008136 ORTHO05D002052 6.2e-06 55.5 188 26.1
Rhsim01G0201900 Rhododendron simsii HOM05D002687 ORTHO05D002052 8.1e-06 55.1 172 25.6
unitig_27.g25123 Utricularia gibba HOM05D000738 ORTHO05D000675 8.1e-06 55.1 189 24.3


User provided reference genes

Program Settings