Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 8.9e-295 1016.1 497 100.0
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 2.4e-138 496.5 469 52.7
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 5.5e-135 485.3 496 51.4
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 2.1e-134 483.4 496 51.4
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 4.6e-134 482.3 504 50.0
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 6.7e-133 478.4 492 50.2
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 1.9e-132 476.9 487 51.5
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 9.0e-130 468.0 475 51.6
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 1.5e-129 467.2 494 50.4
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 4.5e-129 465.7 480 49.8
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 2.2e-128 463.4 509 49.5
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 2.9e-128 463.0 494 50.4
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 4.9e-128 462.2 487 49.9
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 2.5e-127 459.9 494 50.2
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 5.5e-127 458.8 478 50.0
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 1.8e-125 453.8 477 50.1
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 8.2e-123 444.9 474 50.0
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 9.0e-122 441.4 476 49.4
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 1.2e-121 441.0 476 48.5
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 4.5e-121 439.1 500 46.8
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 2.9e-120 436.4 478 48.3
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 3.8e-120 436.0 487 47.6
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 9.3e-119 431.4 480 49.8
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 4.6e-118 429.1 479 48.4
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 2.3e-117 426.8 479 48.6
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 3.9e-117 426.0 490 46.7
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 3.7e-115 419.5 475 46.9
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 4.8e-115 419.1 478 46.4
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 1.4e-114 417.5 479 46.8
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 1.8e-114 417.2 497 48.7
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 6.9e-114 415.2 476 47.3
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 1.3e-112 411.0 486 47.1
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 1.3e-112 411.0 500 45.2
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 1.3e-112 411.0 486 46.9
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 6.5e-112 408.7 484 46.7
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 8.5e-112 408.3 494 46.6
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 4.2e-111 406.0 478 47.5
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 5.5e-111 405.6 472 45.3
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 7.2e-111 405.2 477 47.0
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 1.2e-110 404.4 487 45.6
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 2.7e-110 403.3 490 45.9
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 1.0e-109 401.4 407 53.1
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 8.8e-109 398.3 488 44.7
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 1.7e-107 394.0 493 44.6
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 1.7e-107 394.0 495 44.2
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 1.8e-106 390.6 485 43.5
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.8e-106 390.6 476 44.3
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 9.1e-106 388.3 485 43.3
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 4.5e-105 386.0 495 44.0
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 2.9e-104 383.3 482 45.4
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 6.5e-104 382.1 476 45.2
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 2.5e-103 380.2 476 46.0
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 1.2e-102 377.9 478 45.2
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 4.7e-102 375.9 564 41.0
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 2.6e-100 370.2 479 44.1
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 4.4e-100 369.4 525 43.0
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 4.4e-100 369.4 443 45.8
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 9.7e-100 368.2 579 39.9
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 5.3e-98 362.5 484 43.4
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 1.7e-96 357.5 490 42.4
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 2.9e-96 356.7 472 45.1
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 1.5e-95 354.4 472 44.9
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 1.5e-95 354.4 472 44.9
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 9.4e-95 351.7 481 44.3
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 1.6e-94 350.9 475 45.1
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 1.4e-93 347.8 485 43.9
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 6.7e-93 345.5 476 42.0
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 8.8e-93 345.1 476 42.2
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 1.2e-92 344.7 485 43.3
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 1.3e-91 341.3 476 43.1
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 4.1e-90 336.3 479 44.1
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 2.7e-89 333.6 486 41.2
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 1.0e-88 331.6 475 41.3
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 1.0e-88 331.6 344 50.6
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 1.5e-87 327.8 510 39.6
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 3.7e-83 313.2 378 44.2
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 4.8e-83 312.8 518 38.2
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 2.4e-82 310.5 257 60.7
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 3.7e-75 286.6 334 48.5
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 4.9e-67 259.6 343 42.3
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 2.4e-66 257.3 334 44.6
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 1.2e-65 255.0 257 49.8
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.9e-58 231.1 245 49.4
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 2.3e-53 214.2 419 34.6
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 2.1e-49 201.1 197 55.3
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 4.3e-47 193.4 544 27.8
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 7.6e-44 182.6 179 53.1
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 7.8e-41 172.6 345 34.2
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 1.9e-39 167.9 276 36.6
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 9.9e-36 155.6 132 59.1
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 3.8e-35 153.7 358 29.9
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 3.5e-33 147.1 168 48.8
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 3.3e-31 140.6 132 53.8
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 1.5e-28 131.7 160 41.9
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 5.8e-28 129.8 450 27.3
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 4.9e-27 126.7 361 31.0
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 1.4e-26 125.2 249 36.5
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 3.3e-23 114.0 171 42.7
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 1.1e-21 109.0 191 35.1
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 4.5e-20 103.6 87 58.6
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 2.2e-19 101.3 448 24.3
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 5.1e-16 90.1 126 45.2
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 2.1e-14 84.7 135 35.6
Gohir.D10G064900 Gossypium hirsutum HOM05D006061 ORTHO05D007450 3.7e-14 84.0 138 34.8
Psat1g093320 Pisum sativum HOM05D006061 ORTHO05D007450 1.3e-11 75.5 138 31.9
SHI26848 Sapria himalayana HOM05D006061 ORTHO05D007450 2.2e-11 74.7 76 51.3
Psat0ss8385g0040 Pisum sativum HOM05D006061 ORTHO05D007450 1.4e-10 72.0 136 29.4
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 1.9e-10 71.6 76 50.0
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 2.7e-09 67.8 192 29.2
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 3.0e-08 64.3 245 26.9
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 6.7e-08 63.2 57 57.9


User provided reference genes

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