Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g08090 Coffea canephora HOM05D017605 ORTHO05D025121 1.1e-110 403.3 201 100.0
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 1.9e-62 243.0 134 88.1
Cc00_g05480 Coffea canephora HOM05D017605 ORTHO05D025121 1.3e-39 167.2 106 79.2
Cc03_g08910 Coffea canephora HOM05D017605 ORTHO05D025121 1.6e-24 117.1 157 40.1
Cc06_g04660 Coffea canephora HOM05D017605 ORTHO05D025121 2.0e-19 100.1 144 43.8
Cc03_g13780 Coffea canephora HOM05D017605 ORTHO05D025121 1.4e-12 77.4 50 66.0
Atru.chr12.1651 Acer truncatum HOM05D000096 ORTHO05D000045 4.9e-10 68.9 103 33.0
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 4.9e-10 68.9 103 34.0
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 1.9e-09 67.0 90 40.0
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 4.2e-09 65.9 76 44.7
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 4.2e-09 65.9 76 44.7
Peaxi162Scf00224g00009 Petunia axillaris HOM05D002261 ORTHO05D002334 4.2e-09 65.9 153 27.5
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 9.3e-09 64.7 191 27.7
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 9.3e-09 64.7 181 29.8
Dinv03711 Davidia involucrata HOM05D006612 ORTHO05D010384 2.7e-08 63.2 82 40.2
CSS0015794 Camellia sinensis var. sinensis HOM05D008336 ORTHO05D010619 4.6e-08 62.4 145 26.9
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 4.6e-08 62.4 68 44.1
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 6.0e-08 62.0 112 32.1
CiPaw.07G170300 Carya illinoinensis HOM05D009267 ORTHO05D010384 6.0e-08 62.0 72 41.7
CiPaw.09G042900 Carya illinoinensis HOM05D009267 ORTHO05D010384 6.0e-08 62.0 112 32.1
CiPaw.13G021400 Carya illinoinensis HOM05D009267 ORTHO05D010384 6.0e-08 62.0 72 41.7
CiPaw.15G013500 Carya illinoinensis HOM05D009267 ORTHO05D010384 6.0e-08 62.0 112 32.1
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 6.0e-08 62.0 112 32.1
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 7.9e-08 61.6 68 44.1
CiPaw.07G195500 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.0e-07 61.2 68 44.1
CiPaw.15G057000 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.0e-07 61.2 112 32.1
CANSAT56G0625 Cannabis sativa HOM05D008860 ORTHO05D010619 1.3e-07 60.8 69 40.6
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 2.3e-07 60.1 68 45.6
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.0e-07 59.7 86 32.6
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 5.1e-07 58.9 192 30.2
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 6.7e-07 58.5 105 33.3
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 6.7e-07 58.5 188 29.8
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 8.7e-07 58.2 188 29.8
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-06 57.8 107 27.1
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 1.1e-06 57.8 117 30.8
Solyc03g044833.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.1e-06 57.8 119 30.3
Dinv08483 Davidia involucrata HOM05D006612 ORTHO05D010384 1.5e-06 57.4 68 42.6
CANSAT11G1715 Cannabis sativa HOM05D008860 ORTHO05D010619 3.3e-06 56.2 85 38.8
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 3.3e-06 56.2 204 23.0
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.3e-06 56.2 96 30.2
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 4.3e-06 55.8 119 30.3
CANSAT01G2695 Cannabis sativa HOM05D008860 ORTHO05D010384 7.4e-06 55.1 111 31.5
Nitab4.5_0002141g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.4e-06 55.1 107 36.4
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 9.6e-06 54.7 201 24.4


User provided reference genes

Program Settings