Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g05520 Coffea canephora HOM05D005370 ORTHO05D006659 4.7e-71 271.2 145 100.0
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 2.8e-55 218.8 147 85.0
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 1.4e-30 136.7 146 57.5
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 8.4e-28 127.5 156 49.4
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 7.1e-27 124.4 149 49.0
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 9.3e-27 124.0 142 51.4
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 7.9e-26 120.9 130 56.9
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 7.9e-26 120.9 130 56.9
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 3.0e-25 119.0 141 51.1
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 8.7e-25 117.5 146 53.4
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 2.1e-23 112.8 147 50.3
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 2.8e-23 112.5 157 48.4
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 2.8e-23 112.5 143 47.6
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 8.2e-23 110.9 147 50.3
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 8.2e-23 110.9 176 45.5
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 1.1e-22 110.5 151 49.0
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 1.4e-22 110.2 159 49.1
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 3.1e-22 109.0 141 47.5
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 4.0e-22 108.6 162 45.7
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 4.0e-22 108.6 174 44.3
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 6.9e-22 107.8 142 47.9
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 6.9e-22 107.8 164 46.3
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 1.2e-21 107.1 137 51.1
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 1.2e-21 107.1 141 48.2
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 1.2e-21 107.1 143 48.3
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 2.6e-21 105.9 147 44.9
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 4.5e-21 105.1 149 47.7
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 4.5e-21 105.1 150 50.0
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 5.8e-21 104.8 167 43.7
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 5.8e-21 104.8 155 47.7
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 7.6e-21 104.4 167 43.7
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 1.0e-20 104.0 141 46.1
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 1.0e-20 104.0 141 47.5
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 1.0e-20 104.0 143 46.9
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 1.0e-20 104.0 141 45.4
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 1.7e-20 103.2 168 44.0
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 1.7e-20 103.2 147 49.7
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 1.7e-20 103.2 141 45.4
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 8.4e-20 100.9 146 45.9
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 8.4e-20 100.9 158 45.6
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 8.4e-20 100.9 141 45.4
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 8.4e-20 100.9 142 44.4
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.1e-19 100.5 142 44.4
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 1.9e-19 99.8 140 45.7
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 1.9e-19 99.8 141 43.3
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 4.2e-19 98.6 147 45.6
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 7.1e-19 97.8 141 45.4
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 9.3e-19 97.4 146 43.8
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 1.2e-18 97.1 143 49.0
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 1.6e-18 96.7 169 42.6
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 1.6e-18 96.7 143 45.5
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 2.7e-18 95.9 152 43.4
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 6.0e-18 94.7 143 46.9
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 1.3e-17 93.6 145 43.4
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 1.8e-17 93.2 145 43.4
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 1.8e-17 93.2 141 44.0
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 1.8e-17 93.2 143 48.3
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 1.8e-17 93.2 170 40.0
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 6.7e-17 91.3 139 44.6
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 1.9e-16 89.7 141 43.3
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 2.5e-16 89.4 140 43.6
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 2.5e-16 89.4 205 37.6
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 5.7e-16 88.2 140 42.9
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 3.7e-15 85.5 157 40.1
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 8.2e-15 84.3 152 39.5
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 1.1e-14 84.0 168 38.1
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 1.4e-14 83.6 152 39.5
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 1.8e-14 83.2 103 50.5
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 3.4e-13 79.0 127 41.7
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 5.9e-13 78.2 134 38.8
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 1.0e-12 77.4 141 40.4
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.7e-12 76.6 142 41.5
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 1.7e-12 76.6 143 42.0
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 2.2e-12 76.3 155 38.1
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 5.0e-12 75.1 147 40.1
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 6.5e-12 74.7 153 38.6
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 1.4e-11 73.6 139 39.6
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 2.5e-11 72.8 152 38.2
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 4.2e-11 72.0 152 38.2
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 3.6e-10 68.9 135 35.6
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 3.6e-10 68.9 113 46.9
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 7.9e-10 67.8 91 46.2
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 1.0e-09 67.4 94 42.6
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 1.0e-09 67.4 139 36.0
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 1.8e-09 66.6 153 37.3
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 2.3e-09 66.2 139 36.7
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 3.0e-09 65.9 143 36.4
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 3.0e-09 65.9 110 40.0
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 3.0e-09 65.9 112 41.1
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 3.9e-09 65.5 135 35.6
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 3.9e-09 65.5 137 38.0
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 6.7e-09 64.7 143 33.6
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 6.7e-09 64.7 110 39.1
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 8.8e-09 64.3 140 34.3
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 8.8e-09 64.3 140 34.3
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 8.8e-09 64.3 140 34.3
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 8.8e-09 64.3 123 37.4
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 1.1e-08 63.9 113 39.8
SEGI_21191 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 2.8e-07 59.3 97 42.3
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.8e-07 58.5 110 40.9
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 5.3e-06 55.1 135 31.9


User provided reference genes

Program Settings