Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 1.0e-151 540.0 268 100.0
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 3.0e-95 352.4 240 65.0
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 5.6e-94 348.2 249 63.9
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 5.6e-94 348.2 243 65.8
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 5.6e-94 348.2 243 65.8
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 3.6e-93 345.5 240 65.4
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 2.4e-92 342.8 241 62.7
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 1.7e-90 336.7 240 65.0
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 2.2e-90 336.3 240 61.7
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 3.8e-90 335.5 231 65.4
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 3.8e-90 335.5 240 62.9
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.1e-89 334.0 233 65.2
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 1.1e-89 334.0 240 61.7
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 1.1e-89 334.0 237 62.0
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 9.3e-89 330.9 228 66.7
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 1.6e-88 330.1 244 61.1
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 2.7e-88 329.3 238 60.5
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 3.5e-88 328.9 231 64.1
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 3.5e-88 328.9 222 64.0
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 2.3e-87 326.2 228 65.8
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 1.1e-86 323.9 222 65.8
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 1.1e-86 323.9 241 57.3
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 1.5e-86 323.6 269 57.6
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 2.5e-86 322.8 240 60.4
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 2.5e-86 322.8 239 59.0
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 3.3e-86 322.4 241 59.8
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 4.3e-86 322.0 240 60.4
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 7.3e-86 321.2 240 60.8
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 9.6e-86 320.9 227 61.2
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 2.1e-85 319.7 241 59.3
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 2.1e-85 319.7 240 60.0
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 2.8e-85 319.3 228 65.4
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 3.6e-85 318.9 241 60.2
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 3.6e-85 318.9 247 61.1
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 4.8e-85 318.5 262 58.0
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 6.2e-85 318.2 202 68.3
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 1.1e-84 317.4 240 60.0
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 1.8e-84 316.6 233 57.1
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 1.8e-84 316.6 233 63.1
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 1.5e-83 313.5 269 55.4
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 3.4e-83 312.4 230 59.6
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 7.6e-83 311.2 229 58.5
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 1.3e-82 310.5 245 59.2
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 1.7e-82 310.1 229 62.0
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 2.2e-82 309.7 242 55.8
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 2.9e-82 309.3 245 58.8
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 4.9e-82 308.5 208 65.4
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 1.9e-81 306.6 237 57.0
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 3.2e-81 305.8 226 61.9
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 7.1e-81 304.7 219 61.6
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 9.3e-81 304.3 236 56.8
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 1.2e-80 303.9 214 63.6
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 6.0e-80 301.6 247 55.9
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 6.0e-80 301.6 247 58.3
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 7.9e-80 301.2 228 59.2
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 2.3e-79 299.7 227 59.5
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 6.7e-79 298.1 248 56.5
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 6.7e-79 298.1 203 61.6
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 1.1e-78 297.4 273 54.2
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 2.5e-78 296.2 247 56.7
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 2.5e-78 296.2 225 59.6
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 3.3e-78 295.8 249 57.4
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 3.3e-78 295.8 231 57.6
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 3.3e-78 295.8 241 56.4
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 5.6e-78 295.0 248 58.1
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 7.4e-78 294.7 223 58.3
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 1.3e-77 293.9 248 54.8
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 2.8e-77 292.7 262 54.6
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 6.2e-77 291.6 231 60.2
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 6.2e-77 291.6 250 55.2
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 1.1e-76 290.8 250 56.0
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.4e-76 290.4 222 60.8
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 1.4e-76 290.4 249 56.6
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 1.8e-76 290.0 261 53.6
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 6.9e-76 288.1 248 57.7
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 6.9e-76 288.1 245 55.5
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 2.0e-75 286.6 261 53.6
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 2.6e-75 286.2 248 58.1
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 4.5e-75 285.4 248 55.6
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 5.8e-75 285.0 199 64.8
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 7.6e-75 284.6 265 52.1
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 2.9e-74 282.7 262 53.1
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 6.4e-74 281.6 220 57.3
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 6.4e-74 281.6 220 57.3
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 1.9e-73 280.0 234 57.3
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 3.2e-73 279.3 234 57.3
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 7.1e-73 278.1 242 53.3
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 9.3e-73 277.7 243 53.9
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 2.7e-72 276.2 203 60.6
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 1.3e-71 273.9 202 61.9
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 1.1e-70 270.8 233 54.9
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 1.1e-70 270.8 202 60.9
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 4.3e-70 268.9 172 66.3
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 5.6e-70 268.5 172 66.3
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 5.6e-70 268.5 172 66.3
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 1.6e-69 266.9 172 65.1
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 6.2e-69 265.0 222 56.8
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 2.0e-67 260.0 225 54.2
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 1.6e-64 250.4 194 59.3
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 1.6e-64 250.4 194 59.3
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 5.1e-63 245.4 208 58.7
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 5.1e-63 245.4 208 58.7
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.1e-62 244.2 224 54.5
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 8.2e-61 238.0 212 53.3
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 6.9e-60 235.0 222 51.4
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.2e-59 234.2 223 53.4
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 2.0e-59 233.4 232 50.4
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 1.0e-58 231.1 160 61.9
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 7.9e-56 221.5 125 76.0
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 3.3e-54 216.1 209 50.7
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 1.8e-52 210.3 179 52.0
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 2.9e-50 203.0 162 58.0
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 4.4e-46 189.1 222 45.5
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 4.4e-38 162.5 122 59.0
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.9e-33 147.1 120 54.2
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 5.5e-33 145.6 84 65.5
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 7.2e-33 145.2 120 53.3
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 3.0e-31 139.8 82 73.2
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 2.8e-29 133.3 102 52.9
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 2.9e-18 96.7 181 37.0
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 6.1e-08 62.4 79 44.3


User provided reference genes

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