Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g03740 Coffea canephora HOM05D004860 ORTHO05D006366 6.1e-57 223.8 102 100.0
Cc02_g31730 Coffea canephora HOM05D004860 ORTHO05D006366 1.7e-38 162.5 120 68.3
Cc03_g03100 Coffea canephora HOM05D004860 ORTHO05D006366 8.2e-38 160.2 117 70.1
Cc09_g08330 Coffea canephora HOM05D004860 ORTHO05D006366 1.4e-37 159.5 99 78.8
CSS0038220 Camellia sinensis var. sinensis HOM05D004860 ORTHO05D006366 3.8e-35 151.4 117 63.2
Actinidia40192 Actinidia chinensis HOM05D004860 ORTHO05D006366 1.9e-34 149.1 117 62.4
Aqoxy2G03261 Aquilegia oxysepala HOM05D004860 ORTHO05D006366 1.9e-34 149.1 117 64.1
Nn4g26191 Nelumbo nucifera HOM05D004860 ORTHO05D006366 1.9e-34 149.1 117 63.2
GSVIVG01017886001 Vitis vinifera HOM05D004860 ORTHO05D006366 2.5e-34 148.7 117 63.2
CDE02G3435 Ceratophyllum demersum HOM05D004860 ORTHO05D006366 3.2e-34 148.3 117 63.2
Potri.008G202300 Populus trichocarpa HOM05D004860 ORTHO05D006366 5.5e-34 147.5 117 65.0
Sabra08G0159200 Salix brachista HOM05D004860 ORTHO05D006366 5.5e-34 147.5 117 65.0
TAR636G2819 Trochodendron aralioides HOM05D004860 ORTHO05D006366 5.5e-34 147.5 117 62.4
ECA240G4413 Erigeron canadensis HOM05D004860 ORTHO05D006366 9.4e-34 146.7 117 60.7
Medtr4g117310 Medicago truncatula HOM05D004860 ORTHO05D006366 1.2e-33 146.4 117 64.1
PGR031G2771 Punica granatum HOM05D004860 ORTHO05D006366 1.6e-33 146.0 117 64.1
TAR365G0160 Trochodendron aralioides HOM05D004860 ORTHO05D006366 1.6e-33 146.0 117 61.5
Gohir.D05G318100 Gossypium hirsutum HOM05D004860 ORTHO05D006366 2.1e-33 145.6 117 64.1
Ca_21591_v3 Cicer arietinum L. HOM05D004860 ORTHO05D006366 2.7e-33 145.2 117 63.2
Lj4g0005512 Lotus japonicus HOM05D004860 ORTHO05D006366 2.7e-33 145.2 117 63.2
TPR.G20138 Trifolium pratense HOM05D004860 ORTHO05D006366 2.7e-33 145.2 117 63.2
Zm00001eb303280 Zea mays HOM05D004860 ORTHO05D006366 2.7e-33 145.2 117 62.4
QL06p004255 Quercus lobata HOM05D004860 ORTHO05D006366 4.7e-33 144.4 115 62.6
Duzib212G0960 Durio zibethinus HOM05D004860 ORTHO05D006366 6.1e-33 144.1 118 61.0
Phvul.003G093000 Phaseolus vulgaris HOM05D004860 ORTHO05D006366 6.1e-33 144.1 117 62.4
Psat4g031440 Pisum sativum HOM05D004860 ORTHO05D006366 6.1e-33 144.1 117 62.4
HanXRQChr09g0248101 Helianthus annuus HOM05D004860 ORTHO05D006366 8.0e-33 143.7 117 59.8
Os07g0211800 Oryza sativa ssp. japonica HOM05D004860 ORTHO05D006366 8.0e-33 143.7 117 62.4
PSO407G0112 Papaver somniferum HOM05D004860 ORTHO05D006366 8.0e-33 143.7 115 60.9
Thecc.04G221400 Theobroma cacao HOM05D004860 ORTHO05D006366 8.0e-33 143.7 117 61.5
Haze_00965 Corylus avellana HOM05D004860 ORTHO05D006366 1.0e-32 143.3 117 62.4
Duzib268G1873 Durio zibethinus HOM05D004860 ORTHO05D006366 1.0e-32 143.3 117 61.5
Glyma.17G017300 Glycine max HOM05D004860 ORTHO05D006366 1.0e-32 143.3 117 61.5
TWI73G0632 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 1.0e-32 143.3 117 62.4
Ah.07g203980 Amaranthus hybridus HOM05D004860 ORTHO05D006366 1.4e-32 142.9 117 60.7
COL.COLO4_21645 Corchorus olitorius HOM05D004860 ORTHO05D006366 1.4e-32 142.9 117 61.5
Gohir.A05G316600 Gossypium hirsutum HOM05D004860 ORTHO05D006366 1.4e-32 142.9 117 62.4
Lalb_Chr07g0177321 Lupinus albus HOM05D004860 ORTHO05D006366 1.4e-32 142.9 117 61.5
VMungo1215G0712 Vigna mungo HOM05D004860 ORTHO05D006366 1.4e-32 142.9 117 60.7
arahy.Tifrunner.gnm1.ann1.K193BP Arachis hypogaea HOM05D004860 ORTHO05D006366 1.8e-32 142.5 117 62.4
arahy.Tifrunner.gnm1.ann1.PDW3QZ Arachis hypogaea HOM05D004860 ORTHO05D006366 1.8e-32 142.5 117 62.4
CANSAT78G2493 Cannabis sativa HOM05D004860 ORTHO05D006366 1.8e-32 142.5 117 59.8
FAN17G0307 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.8e-32 142.5 117 60.7
Gorai.009G340700 Gossypium raimondii HOM05D004860 ORTHO05D006366 1.8e-32 142.5 117 62.4
PSO170G1688 Papaver somniferum HOM05D004860 ORTHO05D006366 1.8e-32 142.5 115 60.0
Atru.chr4.2574 Acer truncatum HOM05D004860 ORTHO05D006366 2.3e-32 142.1 117 60.7
Cpa.g.sc16.26 Carica papaya HOM05D004860 ORTHO05D006366 2.3e-32 142.1 117 59.8
FvH4_4g14470 Fragaria vesca HOM05D004860 ORTHO05D006366 2.3e-32 142.1 117 59.8
Glyma.07G256800 Glycine max HOM05D004860 ORTHO05D006366 2.3e-32 142.1 117 60.7
Solyc01g080140.3 Solanum lycopersicum HOM05D004860 ORTHO05D006366 2.3e-32 142.1 117 59.0
Sopen01g031920 Solanum pennellii HOM05D004860 ORTHO05D006366 2.3e-32 142.1 117 59.0
FAN12G3962 Fragaria x ananassa HOM05D004860 ORTHO05D006366 3.0e-32 141.7 117 59.8
FAN22G2324 Fragaria x ananassa HOM05D004860 ORTHO05D006366 3.0e-32 141.7 117 59.8
Ciclev10005293m.g Citrus clementina HOM05D004860 ORTHO05D006366 4.0e-32 141.4 117 61.5
THA.LOC104818790 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 4.0e-32 141.4 117 60.7
MD16G1183500 Malus domestica HOM05D004860 ORTHO05D006366 5.2e-32 141.0 115 59.1
Oeu029304.1 Olea europaea HOM05D004860 ORTHO05D006366 5.2e-32 141.0 117 59.8
THA.LOC104822311 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 5.2e-32 141.0 117 59.8
FAN07G1456 Fragaria x ananassa HOM05D004860 ORTHO05D006366 6.8e-32 140.6 117 59.0
MD13G1182900 Malus domestica HOM05D004860 ORTHO05D006366 6.8e-32 140.6 115 60.0
Prupe.1G151200 Prunus persica HOM05D004860 ORTHO05D006366 6.8e-32 140.6 115 59.1
Dinv38393 Davidia involucrata HOM05D001530 ORTHO05D004168 8.8e-32 140.2 91 72.5
MBI17_g12009_MAGBIO Magnolia biondii HOM05D004860 ORTHO05D006366 8.8e-32 140.2 117 60.7
Lj3C761T9 Lonicera japonica HOM05D004860 ORTHO05D006366 1.2e-31 139.8 117 59.8
RcHm_v2.0_Chr4g0418381 Rosa chinensis HOM05D004860 ORTHO05D006366 1.5e-31 139.4 117 58.1
CiPaw.02G092200 Carya illinoinensis HOM05D004860 ORTHO05D006366 2.0e-31 139.0 117 59.8
CiPaw.01G159800 Carya illinoinensis HOM05D004860 ORTHO05D006366 2.6e-31 138.7 117 59.8
Manes.15G022900 Manihot esculenta HOM05D004860 ORTHO05D006366 2.6e-31 138.7 117 59.8
Hund12197 Selenicereus undatus HOM05D004860 ORTHO05D000105 2.6e-31 138.7 117 59.8
Aa31LG11G10670 Aethionema arabicum HOM05D004860 ORTHO05D006366 5.7e-31 137.5 117 60.7
AL6G30430 Arabidopsis lyrata HOM05D004860 ORTHO05D006366 9.8e-31 136.7 117 59.0
EL10Ac3g06352 Beta vulgaris HOM05D004860 ORTHO05D006366 1.7e-30 136.0 117 59.0
Cfa015580 Carpinus fangiana HOM05D004860 ORTHO05D006366 1.7e-30 136.0 117 60.7
Migut.N00151 Erythranthe guttata HOM05D004860 ORTHO05D006366 1.7e-30 136.0 117 58.1
MSTRG.24756 Avicennia marina HOM05D004860 ORTHO05D006366 2.2e-30 135.6 117 57.3
Ah.13g074180 Amaranthus hybridus HOM05D004860 ORTHO05D006366 2.8e-30 135.2 117 58.1
SEGI_28969 Sequoiadendron giganteum HOM05D004860 ORTHO05D006366 2.8e-30 135.2 115 58.3
Sed0000368 Sechium edule HOM05D004860 ORTHO05D006366 3.7e-30 134.8 115 57.4
AT5G19050 Arabidopsis thaliana HOM05D004860 ORTHO05D006366 6.3e-30 134.0 117 58.1
BcaB08g36622 Brassica carinata HOM05D004860 ORTHO05D006366 6.3e-30 134.0 117 58.1
BcaC04g18624 Brassica carinata HOM05D004860 ORTHO05D006366 6.3e-30 134.0 117 58.1
A10p20640 Brassica napus HOM05D004860 ORTHO05D006366 6.3e-30 134.0 117 58.1
C09p57430 Brassica napus HOM05D004860 ORTHO05D006366 6.3e-30 134.0 117 58.1
BolC9t58612H Brassica oleracea HOM05D004860 ORTHO05D006366 6.3e-30 134.0 117 58.1
BraA10t44127Z Brassica rapa HOM05D004860 ORTHO05D006366 6.3e-30 134.0 117 58.1
Carub.0006s1737 Capsella rubella HOM05D004860 ORTHO05D006366 6.3e-30 134.0 117 58.1
ClCG05G005460 Citrullus lanatus HOM05D004860 ORTHO05D006366 6.3e-30 134.0 115 57.4
Thhalv10013904m.g Eutrema salsugineum HOM05D004860 ORTHO05D006366 6.3e-30 134.0 117 58.1
BcaB01g04878 Brassica carinata HOM05D004860 ORTHO05D006366 8.3e-30 133.7 117 57.3
BolC3t13554H Brassica oleracea HOM05D004860 ORTHO05D006366 8.3e-30 133.7 117 57.3
AUR62030079 Chenopodium quinoa HOM05D004860 ORTHO05D006366 1.1e-29 133.3 117 56.4
MELO3C006570.2 Cucumis melo HOM05D004860 ORTHO05D006366 1.4e-29 132.9 115 56.5
Nitab4.5_0001247g0010 Nicotiana tabacum HOM05D004860 ORTHO05D006366 1.4e-29 132.9 117 59.0
Eucgr.D02658 Eucalyptus grandis HOM05D004860 ORTHO05D006366 1.8e-29 132.5 117 56.4
Sp6g25330 Schrenkiella parvula HOM05D004860 ORTHO05D006366 1.8e-29 132.5 117 57.3
CARHR193940 Cardamine hirsuta HOM05D004860 ORTHO05D006366 3.1e-29 131.7 117 57.3
Mapoly0095s0018 Marchantia polymorpha HOM05D004860 ORTHO05D006366 3.1e-29 131.7 117 55.6
BcaB01g05289 Brassica carinata HOM05D004860 ORTHO05D006366 4.1e-29 131.3 117 56.4
CsaV3_3G013760 Cucumis sativus L. HOM05D004860 ORTHO05D006366 5.4e-29 131.0 115 55.7
BraA03t10247Z Brassica rapa HOM05D004860 ORTHO05D006366 7.0e-29 130.6 117 56.4
unitig_8.g2879 Utricularia gibba HOM05D004860 ORTHO05D006366 9.1e-29 130.2 117 58.1
Migut.G00288 Erythranthe guttata HOM05D004860 ORTHO05D006366 1.2e-28 129.8 117 58.1
Oeu017197.2 Olea europaea HOM05D004860 ORTHO05D006366 2.7e-28 128.6 118 56.8
SalBow5G0733 Salvia bowleyana HOM05D004860 ORTHO05D006366 1.0e-27 126.7 123 53.7
SalBow5G4413 Salvia bowleyana HOM05D004860 ORTHO05D006366 1.0e-27 126.7 123 53.7
Hund22791 Selenicereus undatus HOM05D004860 ORTHO05D006366 1.3e-27 126.3 117 56.4
C03p10800 Brassica napus HOM05D004860 ORTHO05D006366 3.8e-27 124.8 91 64.8
AUR62038223 Chenopodium quinoa HOM05D004860 ORTHO05D006366 5.0e-27 124.4 117 54.7
Eucgr.B01143 Eucalyptus grandis HOM05D004860 ORTHO05D006366 1.1e-26 123.2 117 53.8
A03p09270 Brassica napus HOM05D004860 ORTHO05D006366 3.3e-26 121.7 91 63.7
Pp3c4_4720 Physcomitrium patens HOM05D004860 ORTHO05D006366 4.2e-26 121.3 117 51.3
AagrBONN_evm.TU.Sc2ySwM_117.2400 Anthoceros agrestis HOM05D004860 ORTHO05D006366 7.2e-26 120.6 116 52.6
Peaxi162Scf01766g00011 Petunia axillaris HOM05D004860 ORTHO05D006366 1.8e-24 115.9 117 53.0
CAN.G183.30 Capsicum annuum HOM05D004860 ORTHO05D006366 5.2e-24 114.4 119 49.6
Actinidia12990 Actinidia chinensis HOM05D004860 ORTHO05D006366 5.7e-23 110.9 98 56.1
Lsat_1_v5_gn_7_67361 Lactuca sativa HOM05D004860 ORTHO05D006366 9.8e-23 110.2 117 50.4
SalBow2G3077 Salvia bowleyana HOM05D004860 ORTHO05D006366 1.7e-22 109.4 120 50.8
SMO119G0283 Selaginella moellendorffii HOM05D004860 ORTHO05D006366 3.7e-22 108.2 117 52.1
Dinv44480 Davidia involucrata HOM05D001530 ORTHO05D004168 7.0e-21 104.0 91 53.8
Rhsim04G0207200 Rhododendron simsii HOM05D004860 ORTHO05D006366 1.5e-18 96.3 68 66.2
vmacro08274 Vaccinium macrocarpon HOM05D004860 ORTHO05D006366 1.5e-18 96.3 68 66.2
Lj6A565G28 Lonicera japonica HOM05D004860 ORTHO05D006366 9.5e-18 93.6 71 63.4
Nn1g02160 Nelumbo nucifera HOM05D004860 ORTHO05D006366 9.5e-18 93.6 73 61.6
ATR0626G115 Amborella trichopoda HOM05D004860 ORTHO05D006366 1.9e-10 69.3 37 81.1
SHI00370 Sapria himalayana HOM05D004860 ORTHO05D000023 2.5e-10 68.9 40 70.0
SGA_v2.0_scaffold166G38376 Striga asiatica HOM05D004860 ORTHO05D006366 1.2e-09 66.6 35 80.0
TWI53G0789 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 1.6e-09 66.2 37 73.0
DCAR_002416 Daucus carota HOM05D004860 ORTHO05D006366 2.1e-09 65.9 84 44.0
Manes.03G184900 Manihot esculenta HOM05D004860 ORTHO05D006366 2.8e-09 65.5 37 73.0
Actinidia23474 Actinidia chinensis HOM05D004860 ORTHO05D006366 1.1e-08 63.5 56 53.6
CBR_g23274 Chara braunii HOM05D004860 ORTHO05D006366 1.8e-08 62.8 68 44.1
DCAR_030597 Daucus carota HOM05D004860 ORTHO05D006366 5.8e-07 57.8 51 54.9
Lj6C565T4 Lonicera japonica HOM05D004860 ORTHO05D006366 1.3e-06 56.6 50 54.0
PRCOL_00003006 Prasinoderma coloniale HOM05D004860 ORTHO05D006366 2.9e-06 55.5 97 39.2
HPP92_027343 Vanilla planifolia HOM05D004860 ORTHO05D006366 2.9e-06 55.5 33 72.7


User provided reference genes

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