Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 7.4e-84 313.9 169 100.0
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 2.2e-80 302.4 169 95.9
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 3.9e-69 265.0 169 82.8
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 1.1e-66 256.9 169 81.1
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 4.1e-66 255.0 169 78.1
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 2.6e-65 252.3 168 78.6
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 5.9e-65 251.1 167 78.4
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 7.7e-65 250.8 169 76.9
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 1.0e-64 250.4 169 78.7
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 8.5e-64 247.3 169 78.7
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 1.1e-63 246.9 169 75.7
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 1.9e-63 246.1 169 75.7
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 7.2e-63 244.2 169 76.3
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 9.4e-63 243.8 169 74.6
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 2.1e-62 242.7 169 76.3
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 2.1e-62 242.7 168 75.6
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 4.7e-62 241.5 167 77.2
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 4.7e-62 241.5 167 77.2
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 8.0e-62 240.7 169 75.1
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.0e-61 240.4 169 74.6
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 1.4e-61 240.0 169 72.8
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 1.8e-61 239.6 169 74.0
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 3.9e-61 238.4 180 72.2
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 2.6e-60 235.7 167 77.2
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 5.7e-60 234.6 167 75.4
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 1.7e-59 233.0 169 72.2
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 2.2e-59 232.6 168 73.2
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 3.7e-59 231.9 167 74.9
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 3.7e-59 231.9 167 74.3
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 4.8e-59 231.5 167 74.9
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 4.8e-59 231.5 167 75.4
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 1.4e-58 229.9 165 72.1
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 1.4e-58 229.9 167 74.3
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 3.1e-58 228.8 167 73.7
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 4.1e-58 228.4 167 72.5
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 7.0e-58 227.6 167 70.1
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 9.1e-58 227.3 167 74.3
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 1.6e-57 226.5 167 70.1
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 1.6e-57 226.5 167 70.1
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 1.6e-57 226.5 169 72.8
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 7.7e-57 224.2 169 72.2
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 2.2e-56 222.6 169 67.5
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 2.9e-56 222.2 178 69.1
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 2.9e-56 222.2 166 71.7
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 2.9e-56 222.2 166 69.3
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 5.0e-56 221.5 167 72.5
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 1.1e-55 220.3 169 70.4
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 1.5e-55 219.9 164 71.3
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 1.9e-55 219.5 169 71.0
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 1.9e-55 219.5 167 68.3
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 3.2e-55 218.8 169 70.4
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 1.2e-54 216.9 169 69.2
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 2.1e-54 216.1 169 68.0
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 2.7e-54 215.7 169 69.8
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 4.7e-54 214.9 169 67.5
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 8.0e-54 214.2 169 69.2
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 4.0e-53 211.8 166 69.3
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 8.8e-53 210.7 166 65.7
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.2e-52 210.3 174 67.2
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 2.6e-52 209.1 170 64.7
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 5.7e-52 208.0 166 64.5
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 7.5e-52 207.6 163 67.5
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 7.5e-52 207.6 169 64.5
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 9.7e-52 207.2 170 64.1
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 1.3e-51 206.8 170 64.1
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 1.7e-51 206.5 180 63.3
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 2.2e-51 206.1 145 74.5
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 3.7e-51 205.3 170 63.5
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 1.4e-50 203.4 169 68.6
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 2.4e-50 202.6 169 68.6
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 9.1e-50 200.7 169 66.9
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 2.9e-48 195.7 170 62.4
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 5.0e-48 194.9 143 69.9
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 9.4e-47 190.7 156 66.0
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 8.0e-46 187.6 146 67.8
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.8e-45 186.4 144 68.8
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 6.8e-45 184.5 212 53.8
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 1.5e-44 183.3 167 63.5
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 3.4e-44 182.2 167 58.7
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 4.4e-44 181.8 151 62.3
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 1.3e-43 180.3 169 60.4
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 1.3e-43 180.3 169 60.4
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 6.3e-43 177.9 170 58.8
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 8.3e-43 177.6 151 61.6
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 4.1e-42 175.3 168 56.5
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 4.5e-41 171.8 165 54.5
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 5.9e-41 171.4 170 64.1
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 1.3e-40 170.2 166 57.2
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 1.7e-40 169.9 146 63.0
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 1.1e-39 167.2 170 56.5
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 1.9e-39 166.4 160 56.9
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 7.2e-39 164.5 112 78.6
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 9.5e-39 164.1 161 52.2
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 1.6e-38 163.3 156 55.8
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 4.0e-37 158.7 167 56.3
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 5.2e-37 158.3 162 48.8
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 3.4e-36 155.6 120 69.2
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 7.5e-36 154.5 113 69.0
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 9.2e-34 147.5 113 67.3
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 3.9e-32 142.1 173 53.8
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 1.6e-30 136.7 111 64.0
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 6.1e-30 134.8 169 50.3
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 2.3e-29 132.9 169 49.7
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 4.4e-28 128.6 169 51.5
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 4.9e-27 125.2 163 38.7
AL4G11580 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 5.4e-26 121.7 115 56.5
Zm00001eb304600 Zea mays HOM05D006133 ORTHO05D007855 2.1e-22 109.8 153 39.2
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 6.8e-21 104.8 167 44.9
BcaB02g10593 Brassica carinata HOM05D006133 ORTHO05D007855 4.9e-19 98.6 141 44.0
Os07g0256300 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 4.6e-17 92.0 134 41.0
SGA_v2.0_scaffold499G52489 Striga asiatica HOM05D006133 ORTHO05D007855 1.9e-15 86.7 168 39.3
Cpa.g.sc39.10 Carica papaya HOM05D006133 ORTHO05D007855 7.3e-15 84.7 89 53.9
Prupe.4G042300 Prunus persica HOM05D006133 ORTHO05D007855 1.1e-13 80.9 68 66.2
Eucgr.B00901 Eucalyptus grandis HOM05D006133 ORTHO05D007855 2.3e-13 79.7 105 43.8
Eucgr.B00955 Eucalyptus grandis HOM05D006133 ORTHO05D007855 3.1e-13 79.3 105 43.8
A05p11770 Brassica napus HOM05D006133 ORTHO05D007855 5.2e-13 78.6 95 46.3
Os07g0208801 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 4.4e-12 75.5 64 57.8
Eucgr.B00904 Eucalyptus grandis HOM05D006133 ORTHO05D007855 4.1e-10 68.9 144 34.0
HPP92_006840 Vanilla planifolia HOM05D006133 ORTHO05D007855 3.5e-09 65.9 60 63.3
C04p15300 Brassica napus HOM05D006133 ORTHO05D007855 4.6e-09 65.5 51 68.6
BraA05t20121Z Brassica rapa HOM05D006133 ORTHO05D007855 1.0e-08 64.3 79 48.1
HPP92_006839 Vanilla planifolia HOM05D006133 ORTHO05D007855 3.0e-08 62.8 55 60.0
Eucgr.B00952 Eucalyptus grandis HOM05D006133 ORTHO05D007855 8.6e-08 61.2 98 36.7
Gohir.A01G166500 Gossypium hirsutum HOM05D006133 ORTHO05D007855 5.6e-07 58.5 45 66.7
Zm00001eb131680 Zea mays HOM05D006133 ORTHO05D446205 7.3e-07 58.2 63 49.2
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 7.3e-07 58.2 63 49.2


User provided reference genes

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