Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g01580 Coffea canephora HOM05D000149 ORTHO05D000076 9.9e-39 162.9 79 100.0
Cc00_g28010 Coffea canephora HOM05D000149 ORTHO05D000076 6.6e-27 123.6 63 93.7
Cc01_g00540 Coffea canephora HOM05D000149 ORTHO05D000076 6.2e-25 117.1 64 90.6
Cc01_g02890 Coffea canephora HOM05D000149 ORTHO05D000076 6.2e-25 117.1 64 89.1
Cc01_g02900 Coffea canephora HOM05D000149 ORTHO05D000076 3.1e-24 114.8 64 87.5
Cc01_g00620 Coffea canephora HOM05D000149 ORTHO05D000076 9.0e-24 113.2 64 87.5
Cc01_g00560 Coffea canephora HOM05D000149 ORTHO05D000076 3.4e-23 111.3 62 90.3
Cc01_g00460 Coffea canephora HOM05D000149 ORTHO05D000076 4.4e-23 110.9 64 85.9
Cc00_g25140 Coffea canephora HOM05D000149 ORTHO05D000076 3.8e-22 107.8 62 88.7
Cc01_g02270 Coffea canephora HOM05D000149 ORTHO05D000076 6.4e-22 107.1 64 82.8
Cc00_g09150 Coffea canephora HOM05D000149 ORTHO05D000076 1.1e-21 106.3 66 80.3
Cc01_g02230 Coffea canephora HOM05D000149 ORTHO05D000076 7.9e-12 73.6 65 58.5
Cc00_g33110 Coffea canephora HOM05D000149 ORTHO05D000076 1.8e-11 72.4 65 58.5
Cc05_g05420 Coffea canephora HOM05D000149 ORTHO05D000076 3.0e-11 71.6 61 55.7
Cc01_g02180 Coffea canephora HOM05D000149 ORTHO05D000076 5.6e-10 67.4 63 55.6
Cc01_g02210 Coffea canephora HOM05D000149 ORTHO05D000076 3.7e-09 64.7 63 52.4
Nitab4.5_0007838g0020 Nicotiana tabacum HOM05D000149 ORTHO05D000076 3.1e-08 61.6 64 48.4
Cc09_g06950 Coffea canephora HOM05D000149 ORTHO05D000076 6.9e-08 60.5 65 46.2
Cc01_g00720 Coffea canephora HOM05D000149 ORTHO05D000076 9.0e-08 60.1 64 42.2
Gohir.D02G217200 Gossypium hirsutum HOM05D000149 ORTHO05D000076 1.2e-07 59.7 64 45.3
Gorai.005G245200 Gossypium raimondii HOM05D000149 ORTHO05D000076 1.2e-07 59.7 64 45.3
Medtr3g117060 Medicago truncatula HOM05D000149 ORTHO05D000076 1.5e-07 59.3 65 49.2
arahy.Tifrunner.gnm1.ann1.X644WC Arachis hypogaea HOM05D000149 ORTHO05D000076 2.6e-07 58.5 63 47.6
Cc09_g06960 Coffea canephora HOM05D000149 ORTHO05D000076 2.6e-07 58.5 65 44.6
Cc00_g14730 Coffea canephora HOM05D000149 ORTHO05D000076 4.5e-07 57.8 64 46.9
Ca_15356_v3 Cicer arietinum L. HOM05D000149 ORTHO05D000076 5.8e-07 57.4 64 48.4
TWI09G0921 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 5.8e-07 57.4 64 43.8
Cc02_g09350 Coffea canephora HOM05D000149 ORTHO05D000076 7.6e-07 57.0 64 45.3
arahy.Tifrunner.gnm1.ann1.5QT5LS Arachis hypogaea HOM05D000149 ORTHO05D000076 1.3e-06 56.2 63 46.0
Cc00_g24720 Coffea canephora HOM05D000149 ORTHO05D000076 2.2e-06 55.5 64 40.6
CANSAT11G1268 Cannabis sativa HOM05D000149 ORTHO05D000076 2.9e-06 55.1 64 45.3
Cc09_g07000 Coffea canephora HOM05D000149 ORTHO05D000076 2.9e-06 55.1 65 43.1
RcHm_v2.0_Chr1g0324461 Rosa chinensis HOM05D000149 ORTHO05D000076 2.9e-06 55.1 64 45.3
CANSAT11G0823 Cannabis sativa HOM05D000149 ORTHO05D000076 3.8e-06 54.7 64 42.2
Cc09_g06970 Coffea canephora HOM05D000149 ORTHO05D000076 3.8e-06 54.7 65 41.5
RcHm_v2.0_Chr1g0324421 Rosa chinensis HOM05D000149 ORTHO05D000076 4.9e-06 54.3 64 45.3
TWI38G1872 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 4.9e-06 54.3 64 42.2
Peaxi162Scf00047g00638 Petunia axillaris HOM05D000149 ORTHO05D000076 6.4e-06 53.9 63 44.4
TWI09G1244 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 6.4e-06 53.9 64 42.2
arahy.Tifrunner.gnm1.ann1.V94VIN Arachis hypogaea HOM05D000149 ORTHO05D000076 8.4e-06 53.5 62 46.8
arahy.Tifrunner.gnm1.ann1.W1E7UI Arachis hypogaea HOM05D000149 ORTHO05D000076 8.4e-06 53.5 62 46.8
Lj1g0019594 Lotus japonicus HOM05D000149 ORTHO05D000076 8.4e-06 53.5 64 43.8


User provided reference genes

Program Settings