Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g35730 Coffea canephora HOM05D003115 ORTHO05D003595 1.7e-188 662.5 339 100.0
Cc00_g24210 Coffea canephora HOM05D003115 ORTHO05D003595 2.8e-167 592.0 323 95.4
Dinv16255 Davidia involucrata HOM05D003115 ORTHO05D003595 4.1e-110 402.1 325 63.7
Cc00_g09590 Coffea canephora HOM05D003115 ORTHO05D003595 3.3e-107 392.5 202 98.5
Oeu043445.1 Olea europaea HOM05D003115 ORTHO05D003595 1.1e-105 387.5 323 61.0
Nitab4.5_0000697g0090 Nicotiana tabacum HOM05D003115 ORTHO05D003595 2.6e-104 382.9 323 61.0
CSS0000754 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 3.4e-104 382.5 324 61.7
CiPaw.14G076100 Carya illinoinensis HOM05D003115 ORTHO05D003595 7.6e-104 381.3 326 61.0
Actinidia35847 Actinidia chinensis HOM05D003115 ORTHO05D003595 9.9e-104 380.9 322 60.6
CSS0038204 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 1.7e-103 380.2 324 61.4
GSVIVG01021009001 Vitis vinifera HOM05D003115 ORTHO05D003595 8.4e-103 377.9 324 59.9
Lj6C385T7 Lonicera japonica HOM05D003115 ORTHO05D003595 2.4e-102 376.3 324 59.3
Oeu002918.1 Olea europaea HOM05D003115 ORTHO05D003595 1.9e-99 366.7 323 58.2
QL04p081909 Quercus lobata HOM05D003115 ORTHO05D003595 5.6e-99 365.2 324 57.1
Solyc09g092240.3 Solanum lycopersicum HOM05D003115 ORTHO05D003595 1.6e-98 363.6 320 59.4
Nitab4.5_0012127g0010 Nicotiana tabacum HOM05D003115 ORTHO05D003595 3.6e-98 362.5 347 55.0
Hma1.2p1_0039F.1_g024560 Hydrangea macrophylla HOM05D003115 ORTHO05D003595 4.7e-98 362.1 324 58.3
Sopen09g035170 Solanum pennellii HOM05D003115 ORTHO05D003595 6.2e-98 361.7 320 59.1
vmacro00444 Vaccinium macrocarpon HOM05D003115 ORTHO05D003595 6.2e-98 361.7 329 55.9
Thecc.04G196300 Theobroma cacao HOM05D003115 ORTHO05D003595 3.4e-96 355.9 324 56.2
COL.COLO4_33741 Corchorus olitorius HOM05D003115 ORTHO05D003595 4.4e-96 355.5 324 56.5
Manes.15G056200 Manihot esculenta HOM05D003115 ORTHO05D003595 7.6e-96 354.8 323 57.3
COL.COLO4_20215 Corchorus olitorius HOM05D003115 ORTHO05D003595 1.7e-95 353.6 324 56.2
Duzib212G0201 Durio zibethinus HOM05D003115 ORTHO05D003595 4.2e-94 349.0 328 55.2
Haze_07640 Corylus avellana HOM05D003115 ORTHO05D003595 5.4e-94 348.6 326 57.4
DCAR_007830 Daucus carota HOM05D003115 ORTHO05D003595 7.1e-94 348.2 322 56.8
TAR636G1491 Trochodendron aralioides HOM05D003115 ORTHO05D003595 1.3e-92 344.0 328 56.4
Rhsim09G0059200 Rhododendron simsii HOM05D003115 ORTHO05D003595 3.0e-92 342.8 382 49.2
Gohir.A10G128200 Gossypium hirsutum HOM05D003115 ORTHO05D003595 3.3e-91 339.3 324 55.2
Gohir.D10G137700 Gossypium hirsutum HOM05D003115 ORTHO05D003595 4.3e-91 339.0 324 54.9
Lsat_1_v5_gn_6_59340 Lactuca sativa HOM05D003115 ORTHO05D003595 4.3e-91 339.0 328 56.7
Gorai.011G152900 Gossypium raimondii HOM05D003115 ORTHO05D003595 1.6e-90 337.0 324 54.9
Potri.001G318800 Populus trichocarpa HOM05D003115 ORTHO05D003595 3.6e-90 335.9 324 54.0
MBI17_g03746_MAGBIO Magnolia biondii HOM05D003115 ORTHO05D003595 4.8e-90 335.5 325 54.8
Cfa009508 Carpinus fangiana HOM05D003115 ORTHO05D003595 6.2e-90 335.1 322 55.9
Prupe.3G077100 Prunus persica HOM05D003115 ORTHO05D003595 8.1e-90 334.7 325 53.8
MD17G1201300 Malus domestica HOM05D003115 ORTHO05D003595 1.4e-89 334.0 329 52.3
Migut.B01882 Erythranthe guttata HOM05D003115 ORTHO05D003595 4.0e-89 332.4 322 53.7
RcHm_v2.0_Chr2g0137101 Rosa chinensis HOM05D003115 ORTHO05D003595 9.0e-89 331.3 326 55.2
Prupe.3G074200 Prunus persica HOM05D003115 ORTHO05D003595 2.0e-88 330.1 325 52.9
Sabra16G0201800 Salix brachista HOM05D003115 ORTHO05D003595 2.6e-88 329.7 323 53.9
TWI56G0473 Tripterygium wilfordii HOM05D003115 ORTHO05D003595 9.9e-88 327.8 325 52.6
PGR119G1374 Punica granatum HOM05D003115 ORTHO05D003595 4.9e-87 325.5 323 53.9
PSO210G2420 Papaver somniferum HOM05D003115 ORTHO05D003595 6.4e-87 325.1 315 54.3
SGA_v2.0_scaffold5G03024 Striga asiatica HOM05D003115 ORTHO05D003595 8.4e-87 324.7 322 53.4
Sed0014363 Sechium edule HOM05D003115 ORTHO05D003595 1.1e-86 324.3 324 52.5
Ciclev10004117m.g Citrus clementina HOM05D003115 ORTHO05D003595 1.4e-86 323.9 317 53.6
PSO832G1670 Papaver somniferum HOM05D003115 ORTHO05D003595 1.4e-86 323.9 315 54.3
Eucgr.H00031 Eucalyptus grandis HOM05D003115 ORTHO05D003595 2.4e-86 323.2 308 55.5
MELO3C020422.2 Cucumis melo HOM05D003115 ORTHO05D003595 7.1e-86 321.6 324 53.1
Atru.chr10.1944 Acer truncatum HOM05D003115 ORTHO05D003595 1.2e-85 320.9 327 54.4
TPR.G14704 Trifolium pratense HOM05D003115 ORTHO05D003595 2.1e-85 320.1 324 54.3
Glyma.18G016000 Glycine max HOM05D003115 ORTHO05D003595 2.7e-85 319.7 324 53.1
Nn4g23612 Nelumbo nucifera HOM05D003115 ORTHO05D003595 4.6e-85 318.9 328 53.7
Ca_07922_v3 Cicer arietinum L. HOM05D003115 ORTHO05D003595 7.9e-85 318.2 326 52.8
HanXRQChr17g0546471 Helianthus annuus HOM05D003115 ORTHO05D003595 1.8e-84 317.0 323 53.6
Sc25g0005820 Simmondsia chinensis HOM05D003115 ORTHO05D003595 3.0e-84 316.2 328 50.3
ECA233G4989 Erigeron canadensis HOM05D003115 ORTHO05D003595 3.9e-84 315.8 324 55.6
FAN05G1620 Fragaria x ananassa HOM05D003115 ORTHO05D003595 5.1e-84 315.5 324 51.2
THA.LOC104808700 Tarenaya hassleriana HOM05D003115 ORTHO05D003595 6.7e-84 315.1 321 53.3
Medtr3g083970 Medicago truncatula HOM05D003115 ORTHO05D003595 8.7e-84 314.7 332 52.4
SalBow3G3081 Salvia bowleyana HOM05D003115 ORTHO05D003595 8.7e-84 314.7 322 50.6
CsaV3_2G011790 Cucumis sativus L. HOM05D003115 ORTHO05D003595 4.3e-83 312.4 324 52.2
FvH4_6g30710 Fragaria vesca HOM05D003115 ORTHO05D003595 4.3e-83 312.4 324 51.2
FAN14G0460 Fragaria x ananassa HOM05D003115 ORTHO05D003595 4.3e-83 312.4 324 51.2
Lalb_Chr23g0269101 Lupinus albus HOM05D003115 ORTHO05D003595 4.3e-83 312.4 322 51.6
Hund11640 Selenicereus undatus HOM05D003115 ORTHO05D003595 7.4e-83 311.6 324 50.6
FAN02G0145 Fragaria x ananassa HOM05D003115 ORTHO05D003595 9.6e-83 311.2 324 51.2
FAN09G2094 Fragaria x ananassa HOM05D003115 ORTHO05D003595 9.6e-83 311.2 324 50.9
Phvul.001G253000 Phaseolus vulgaris HOM05D003115 ORTHO05D003595 9.6e-83 311.2 325 52.0
Lj6g0020396 Lotus japonicus HOM05D003115 ORTHO05D003595 1.3e-82 310.8 324 52.2
ClCG06G007990 Citrullus lanatus HOM05D003115 ORTHO05D003595 2.1e-82 310.1 328 51.8
Ah.04g149340 Amaranthus hybridus HOM05D003115 ORTHO05D003595 4.8e-82 308.9 338 50.3
EL10Ac3g07463 Beta vulgaris HOM05D003115 ORTHO05D003595 1.1e-81 307.8 313 52.1
AUR62020852 Chenopodium quinoa HOM05D003115 ORTHO05D003595 1.4e-81 307.4 322 50.0
VMungo1383G2293 Vigna mungo HOM05D003115 ORTHO05D003595 1.4e-81 307.4 325 51.7
Aqoxy5G00431 Aquilegia oxysepala HOM05D003115 ORTHO05D003595 3.1e-81 306.2 323 51.7
AUR62018566 Chenopodium quinoa HOM05D003115 ORTHO05D003595 4.0e-81 305.8 313 51.1
arahy.Tifrunner.gnm1.ann1.01WSAY Arachis hypogaea HOM05D003115 ORTHO05D003595 5.3e-81 305.4 367 47.1
Atru.chr4.1597 Acer truncatum HOM05D003115 ORTHO05D003595 1.2e-80 304.3 313 53.7
Peaxi162Scf00047g00136 Petunia axillaris HOM05D003115 ORTHO05D003595 8.4e-79 298.1 286 55.2
arahy.Tifrunner.gnm1.ann1.QS081X Arachis hypogaea HOM05D003115 ORTHO05D003595 9.3e-78 294.7 381 44.9
Carub.0007s0955 Capsella rubella HOM05D003115 ORTHO05D003595 6.0e-77 292.0 322 50.3
AL7G21090 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 1.3e-76 290.8 321 49.8
AT4G30990 Arabidopsis thaliana HOM05D003115 ORTHO05D003595 1.8e-76 290.4 327 49.2
Thhalv10024182m.g Eutrema salsugineum HOM05D003115 ORTHO05D003595 6.7e-76 288.5 319 50.5
BcaNung01550 Brassica carinata HOM05D003115 ORTHO05D003595 2.5e-75 286.6 330 48.5
Sp7g28860 Schrenkiella parvula HOM05D003115 ORTHO05D003595 3.3e-75 286.2 331 48.9
C07p58370 Brassica napus HOM05D003115 ORTHO05D003595 5.6e-75 285.4 327 49.5
Aa31LG2G19350 Aethionema arabicum HOM05D003115 ORTHO05D003595 7.4e-75 285.0 318 50.6
BcaNung02730 Brassica carinata HOM05D003115 ORTHO05D003595 2.8e-74 283.1 327 49.2
A03p60500 Brassica napus HOM05D003115 ORTHO05D003595 2.8e-74 283.1 330 48.5
BraA03t15089Z Brassica rapa HOM05D003115 ORTHO05D003595 2.8e-74 283.1 330 48.5
BolC7t46291H Brassica oleracea HOM05D003115 ORTHO05D003595 4.0e-73 279.3 327 48.6
Thhalv10009353m.g Eutrema salsugineum HOM05D003115 ORTHO05D003595 5.3e-73 278.9 317 48.9
A09p40420 Brassica napus HOM05D003115 ORTHO05D003595 1.2e-72 277.7 316 48.4
BraA09t39538Z Brassica rapa HOM05D003115 ORTHO05D003595 1.2e-72 277.7 316 48.4
CARHR024920 Cardamine hirsuta HOM05D003115 ORTHO05D003595 1.5e-72 277.3 325 45.8
CARHR238880 Cardamine hirsuta HOM05D003115 ORTHO05D003595 3.4e-72 276.2 329 48.3
Carub.0005s0720 Capsella rubella HOM05D003115 ORTHO05D003595 4.9e-71 272.3 319 49.2
BcaC05g26358 Brassica carinata HOM05D003115 ORTHO05D003595 1.1e-70 271.2 317 48.9
Carub.0001s2398 Capsella rubella HOM05D003115 ORTHO05D003595 2.7e-69 266.5 318 48.1
HPP92_007257 Vanilla planifolia HOM05D003115 ORTHO05D003595 2.3e-68 263.5 338 46.2
AL1G38530 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 3.3e-67 259.6 318 46.5
AL1G41060 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 2.2e-66 256.9 317 45.7
ATR0665G483 Amborella trichopoda HOM05D003115 ORTHO05D003595 2.9e-63 246.5 348 42.2
AL1G39310 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 7.2e-62 241.9 315 44.8
CDE07G0754 Ceratophyllum demersum HOM05D003115 ORTHO05D003595 1.2e-61 241.1 324 43.8
Zm00001eb121880 Zea mays HOM05D003115 ORTHO05D003595 3.3e-59 233.0 334 41.9
C05p23810 Brassica napus HOM05D003115 ORTHO05D003595 2.3e-52 210.3 314 39.8
BolC5t31100H Brassica oleracea HOM05D003115 ORTHO05D003595 2.3e-52 210.3 314 39.8
SEGI_06154 Sequoiadendron giganteum HOM05D003115 ORTHO05D003595 1.3e-47 194.5 339 34.8
HPP92_007263 Vanilla planifolia HOM05D003115 ORTHO05D003595 4.8e-42 176.0 218 46.8
Pp3c3_18970 Physcomitrium patens HOM05D003115 ORTHO05D003595 3.5e-40 169.9 387 31.5
unitig_578.g16273 Utricularia gibba HOM05D003115 ORTHO05D003595 2.2e-34 150.6 307 33.6
Mapoly0054s0075 Marchantia polymorpha HOM05D003115 ORTHO05D003595 9.1e-33 145.2 368 29.6
SMO164G0231 Selaginella moellendorffii HOM05D003115 ORTHO05D003595 5.0e-31 139.4 310 32.6
Cpa.g.sc83.40 Carica papaya HOM05D003115 ORTHO05D003595 4.7e-29 132.9 103 64.1
CANSAT78G0886 Cannabis sativa HOM05D003115 ORTHO05D003595 7.5e-27 125.6 112 56.2
AagrBONN_evm.TU.Sc2ySwM_228.2833 Anthoceros agrestis HOM05D003115 ORTHO05D003595 7.7e-24 115.5 380 27.4
Cpa.g.c46004 Carica papaya HOM05D003115 ORTHO05D003595 1.2e-11 75.1 52 67.3


User provided reference genes

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