Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g35650 Coffea canephora HOM05D006336 ORTHO05D007819 9.1e-33 142.9 68 100.0
Cc08_g04510 Coffea canephora HOM05D006336 ORTHO05D007819 9.1e-33 142.9 68 100.0
Cc08_g04560 Coffea canephora HOM05D006336 ORTHO05D007819 9.1e-33 142.9 68 100.0
Cc08_g04580 Coffea canephora HOM05D006336 ORTHO05D007819 7.7e-32 139.8 68 97.1
Cc08_g04540 Coffea canephora HOM05D006336 ORTHO05D007819 1.3e-31 139.0 68 97.1
Cc00_g23060 Coffea canephora HOM05D006336 ORTHO05D007819 5.0e-31 137.1 68 95.6
Lj8C369G2 Lonicera japonica HOM05D006336 ORTHO05D007819 9.1e-25 116.3 66 72.7
Hma1.2p1_0262F.1_g105216 Hydrangea macrophylla HOM05D006336 ORTHO05D007819 1.6e-24 115.5 66 75.8
CANSAT25G0260 Cannabis sativa HOM05D006336 ORTHO05D007819 4.5e-24 114.0 68 70.6
MSTRG.11848 Avicennia marina HOM05D006336 ORTHO05D007819 1.0e-23 112.8 68 72.1
Glyma.17G220200 Glycine max HOM05D006336 ORTHO05D007819 1.3e-23 112.5 68 69.1
Migut.A00484 Erythranthe guttata HOM05D006336 ORTHO05D007819 1.7e-23 112.1 66 69.7
SGA_v2.0_scaffold89G27365 Striga asiatica HOM05D006336 ORTHO05D007819 5.0e-23 110.5 68 66.2
Dinv09419 Davidia involucrata HOM05D006336 ORTHO05D007819 8.5e-23 109.8 66 72.7
Duzib187G1166 Durio zibethinus HOM05D006336 ORTHO05D007819 8.5e-23 109.8 66 68.2
GSVIVG01035507001 Vitis vinifera HOM05D006336 ORTHO05D007819 8.5e-23 109.8 66 69.7
SalBow4G0695 Salvia bowleyana HOM05D006336 ORTHO05D007819 1.1e-22 109.4 66 69.7
TWI32G0525 Tripterygium wilfordii HOM05D006336 ORTHO05D007819 1.1e-22 109.4 66 66.7
PGR044G0762 Punica granatum HOM05D006336 ORTHO05D007819 1.5e-22 109.0 66 69.7
THA.LOC104799597 Tarenaya hassleriana HOM05D006336 ORTHO05D007819 1.5e-22 109.0 66 66.7
vmacro07660 Vaccinium macrocarpon HOM05D006336 ORTHO05D007819 1.9e-22 108.6 66 68.2
AUR62021599 Chenopodium quinoa HOM05D006336 ORTHO05D007819 2.5e-22 108.2 66 68.2
Oeu047793.1 Olea europaea HOM05D006336 ORTHO05D007819 2.5e-22 108.2 66 72.7
Aa31LG4G13380 Aethionema arabicum HOM05D006336 ORTHO05D007819 3.2e-22 107.8 68 66.2
COL.COLO4_21171 Corchorus olitorius HOM05D006336 ORTHO05D007819 3.2e-22 107.8 66 66.7
BcaB01g01223 Brassica carinata HOM05D006336 ORTHO05D007819 4.2e-22 107.5 68 64.7
Sabra06G0167900 Salix brachista HOM05D006336 ORTHO05D007819 4.2e-22 107.5 66 68.2
unitig_32.g10956 Utricularia gibba HOM05D006336 ORTHO05D007819 5.5e-22 107.1 68 67.6
Prupe.1G401200 Prunus persica HOM05D006336 ORTHO05D007819 7.2e-22 106.7 66 68.2
Ciclev10009629m.g Citrus clementina HOM05D006336 ORTHO05D007819 1.2e-21 105.9 66 65.2
BcaC01g02096 Brassica carinata HOM05D006336 ORTHO05D007819 1.6e-21 105.5 68 63.2
A06p22570 Brassica napus HOM05D006336 ORTHO05D007819 1.6e-21 105.5 68 63.2
C03p68560 Brassica napus HOM05D006336 ORTHO05D007819 1.6e-21 105.5 68 63.2
BolC3t19114H Brassica oleracea HOM05D006336 ORTHO05D007819 1.6e-21 105.5 68 63.2
BraA06t25331Z Brassica rapa HOM05D006336 ORTHO05D007819 1.6e-21 105.5 68 63.2
Nn6g35635 Nelumbo nucifera HOM05D006336 ORTHO05D007819 1.6e-21 105.5 65 64.6
Atru.chr7.1812 Acer truncatum HOM05D006336 ORTHO05D007819 2.1e-21 105.1 66 68.2
Aqoxy7G04150 Aquilegia oxysepala HOM05D006336 ORTHO05D007819 2.1e-21 105.1 66 68.2
EL10Ac5g11099 Beta vulgaris HOM05D006336 ORTHO05D007819 2.1e-21 105.1 66 65.2
Rhsim03G0050100 Rhododendron simsii HOM05D006336 ORTHO05D007819 2.1e-21 105.1 66 65.2
Sc04g0003070 Simmondsia chinensis HOM05D006336 ORTHO05D007819 2.1e-21 105.1 66 65.2
TAR636G2611 Trochodendron aralioides HOM05D006336 ORTHO05D007819 2.1e-21 105.1 65 67.7
AT3G43540 Arabidopsis thaliana HOM05D006336 ORTHO05D007819 2.7e-21 104.8 68 63.2
Carub.0005s0929 Capsella rubella HOM05D006336 ORTHO05D007819 2.7e-21 104.8 68 63.2
Carub.0251s0001 Capsella rubella HOM05D006336 ORTHO05D007819 2.7e-21 104.8 68 63.2
Cfa017842 Carpinus fangiana HOM05D006336 ORTHO05D007819 2.7e-21 104.8 66 65.2
AL5G21500 Arabidopsis lyrata HOM05D006336 ORTHO05D007819 3.6e-21 104.4 66 63.6
Lj5g0013864 Lotus japonicus HOM05D006336 ORTHO05D007819 3.6e-21 104.4 66 66.7
MD08G1047000 Malus domestica HOM05D006336 ORTHO05D007819 3.6e-21 104.4 66 65.2
PSO135G0459 Papaver somniferum HOM05D006336 ORTHO05D007819 3.6e-21 104.4 66 63.6
Lalb_Chr24g0393711 Lupinus albus HOM05D006336 ORTHO05D007819 4.7e-21 104.0 66 65.2
arahy.Tifrunner.gnm1.ann1.6DI6VD Arachis hypogaea HOM05D006336 ORTHO05D007819 6.1e-21 103.6 68 63.2
CARHR098720 Cardamine hirsuta HOM05D006336 ORTHO05D007819 8.0e-21 103.2 66 62.1
Potri.006G217700 Populus trichocarpa HOM05D006336 ORTHO05D007819 8.0e-21 103.2 66 65.2
TAR624G1124 Trochodendron aralioides HOM05D006336 ORTHO05D007819 8.0e-21 103.2 65 66.2
VMungo0647G1288 Vigna mungo HOM05D006336 ORTHO05D007819 1.0e-20 102.8 68 63.2
Eucgr.C03178 Eucalyptus grandis HOM05D006336 ORTHO05D007819 1.4e-20 102.4 68 63.2
FvH4_2g37050 Fragaria vesca HOM05D006336 ORTHO05D007819 1.4e-20 102.4 66 62.1
FAN27G0198 Fragaria x ananassa HOM05D006336 ORTHO05D007819 1.4e-20 102.4 66 62.1
Medtr1g014730 Medicago truncatula HOM05D006336 ORTHO05D007819 1.4e-20 102.4 66 65.2
RcHm_v2.0_Chr6g0304731 Rosa chinensis HOM05D006336 ORTHO05D007819 1.4e-20 102.4 66 63.6
Sp5g17620 Schrenkiella parvula HOM05D006336 ORTHO05D007819 1.4e-20 102.4 66 62.1
DCAR_002185 Daucus carota HOM05D006336 ORTHO05D007819 1.8e-20 102.1 63 66.7
Cpa.g.sc82.21 Carica papaya HOM05D006336 ORTHO05D007819 4.0e-20 100.9 66 63.6
Lsat_1_v5_gn_6_74301 Lactuca sativa HOM05D006336 ORTHO05D007819 4.0e-20 100.9 66 65.2
Peaxi162Scf00014g01816 Petunia axillaris HOM05D006336 ORTHO05D007819 4.0e-20 100.9 68 66.2
Zm00001eb313900 Zea mays HOM05D006336 ORTHO05D007819 4.0e-20 100.9 65 61.5
ATR0681G177 Amborella trichopoda HOM05D006336 ORTHO05D007819 5.2e-20 100.5 65 63.1
MBI13_g01670_MAGBIO Magnolia biondii HOM05D006336 ORTHO05D007819 5.2e-20 100.5 66 62.1
Ca_13088_v3 Cicer arietinum L. HOM05D006336 ORTHO05D007819 8.8e-20 99.8 66 62.1
HanXRQChr03g0084651 Helianthus annuus HOM05D006336 ORTHO05D007819 1.2e-19 99.4 65 63.1
CiPaw.13G138600 Carya illinoinensis HOM05D006336 ORTHO05D007819 1.5e-19 99.0 66 62.1
FAN15G0772 Fragaria x ananassa HOM05D006336 ORTHO05D007819 1.5e-19 99.0 66 60.6
Gohir.D06G080900 Gossypium hirsutum HOM05D006336 ORTHO05D007819 2.6e-19 98.2 66 59.1
Sopen08g023730 Solanum pennellii HOM05D006336 ORTHO05D007819 2.6e-19 98.2 66 60.6
Gorai.010G094300 Gossypium raimondii HOM05D006336 ORTHO05D007819 3.4e-19 97.8 66 59.1
Thhalv10002575m.g Eutrema salsugineum HOM05D006336 ORTHO05D007819 4.4e-19 97.4 66 57.6
TPR.G38941 Trifolium pratense HOM05D006336 ORTHO05D007819 4.4e-19 97.4 66 60.6
CAN.G22.30 Capsicum annuum HOM05D006336 ORTHO05D007819 5.7e-19 97.1 66 60.6
PGSC0003DMG400020818 Solanum tuberosum HOM05D006336 ORTHO05D007819 5.7e-19 97.1 66 60.6
Ah.11g048000 Amaranthus hybridus HOM05D006336 ORTHO05D007819 7.5e-19 96.7 62 62.9
Gohir.A06G081300 Gossypium hirsutum HOM05D006336 ORTHO05D007819 7.5e-19 96.7 66 57.6
Nitab4.5_0008763g0010 Nicotiana tabacum HOM05D006336 ORTHO05D007819 7.5e-19 96.7 66 59.1
Phvul.001G044100 Phaseolus vulgaris HOM05D006336 ORTHO05D007819 7.5e-19 96.7 66 60.6
Solyc08g075100.4 Solanum lycopersicum HOM05D006336 ORTHO05D007819 7.5e-19 96.7 66 59.1
Nitab4.5_0008291g0020 Nicotiana tabacum HOM05D006336 ORTHO05D007819 1.3e-18 95.9 66 59.1
Hund02606 Selenicereus undatus HOM05D006336 ORTHO05D007819 1.3e-18 95.9 68 57.4
Sed0027870 Sechium edule HOM05D006336 ORTHO05D007819 1.7e-18 95.5 68 57.4
CDE05G3418 Ceratophyllum demersum HOM05D006336 ORTHO05D007819 2.2e-18 95.1 65 56.9
ECA240G3698 Erigeron canadensis HOM05D006336 ORTHO05D007819 2.8e-18 94.7 65 58.5
arahy.Tifrunner.gnm1.ann1.YUGK7S Arachis hypogaea HOM05D006336 ORTHO05D007819 6.3e-18 93.6 68 55.9
MELO3C016932.2 Cucumis melo HOM05D006336 ORTHO05D007819 6.3e-18 93.6 68 57.4
ClCG05G015960 Citrullus lanatus HOM05D006336 ORTHO05D007819 8.3e-18 93.2 68 55.9
CsaV3_4G036230 Cucumis sativus L. HOM05D006336 ORTHO05D007819 1.4e-17 92.4 68 54.4
HPP92_019316 Vanilla planifolia HOM05D006336 ORTHO05D007819 1.6e-16 89.0 60 58.3
AagrBONN_evm.TU.Sc2ySwM_362.2113 Anthoceros agrestis HOM05D006336 ORTHO05D007819 5.5e-14 80.5 65 50.8
Actinidia27818 Actinidia chinensis HOM05D006336 ORTHO05D007819 7.2e-14 80.1 75 50.7
Pp3c1_38250 Physcomitrium patens HOM05D006336 ORTHO05D007819 7.2e-14 80.1 64 51.6
CDE05G3496 Ceratophyllum demersum HOM05D006336 ORTHO05D007819 2.8e-10 68.2 62 45.2
Mapoly0124s0049 Marchantia polymorpha HOM05D006336 ORTHO05D007819 2.8e-10 68.2 63 52.4
SMO351G0262 Selaginella moellendorffii HOM05D006336 ORTHO05D007819 8.3e-10 66.6 65 44.6


User provided reference genes

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