Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g35280 Coffea canephora HOM05D000108 ORTHO05D026325 4.3e-20 101.3 96 100.0
C08p53960 Brassica napus HOM05D000108 ORTHO05D001724 1.9e-12 75.9 42 85.7
BolC8t52909H Brassica oleracea HOM05D000108 ORTHO05D001724 1.9e-12 75.9 42 85.7
BraA09t42271Z Brassica rapa HOM05D000108 ORTHO05D001724 1.9e-12 75.9 42 85.7
Haze_16828 Corylus avellana HOM05D000108 ORTHO05D001724 7.3e-12 73.9 42 83.3
CiPaw.02G166600 Carya illinoinensis HOM05D000108 ORTHO05D001724 1.2e-11 73.2 46 73.9
Cpa.g.sc18.127 Carica papaya HOM05D000108 ORTHO05D017199 1.6e-11 72.8 42 81.0
Ca_07827_v3 Cicer arietinum L. HOM05D000108 ORTHO05D001724 2.8e-11 72.0 46 73.9
unitig_26.g9320 Utricularia gibba HOM05D000108 ORTHO05D001724 3.6e-11 71.6 42 83.3
EL10Ac1g00910 Beta vulgaris HOM05D000108 ORTHO05D001724 6.2e-11 70.9 42 78.6
FAN18G3296 Fragaria x ananassa HOM05D000108 ORTHO05D001724 6.2e-11 70.9 43 79.1
Rhsim07G0100200 Rhododendron simsii HOM05D000108 ORTHO05D001724 8.1e-11 70.5 43 76.7
FAN01G1930 Fragaria x ananassa HOM05D000108 ORTHO05D001724 1.1e-10 70.1 42 76.2
FAN03G3184 Fragaria x ananassa HOM05D000108 ORTHO05D001724 1.1e-10 70.1 42 76.2
FAN06G4956 Fragaria x ananassa HOM05D000108 ORTHO05D001724 1.1e-10 70.1 42 76.2
FAN10G3584 Fragaria x ananassa HOM05D000108 ORTHO05D001724 1.1e-10 70.1 42 76.2
FAN10G4286 Fragaria x ananassa HOM05D000108 ORTHO05D001724 1.1e-10 70.1 42 76.2
PGR042G0519 Punica granatum HOM05D000108 ORTHO05D001724 1.1e-10 70.1 47 72.3
TAR374G0497 Trochodendron aralioides HOM05D000108 ORTHO05D001724 1.4e-10 69.7 42 81.0
Ah.12g058040 Amaranthus hybridus HOM05D000108 ORTHO05D001724 4.0e-10 68.2 43 79.1
Dinv37742 Davidia involucrata HOM05D000108 ORTHO05D001724 5.2e-10 67.8 42 78.6
ClCG05G002150 Citrullus lanatus HOM05D000108 ORTHO05D001724 1.2e-09 66.6 40 77.5
Sabra03G0081400 Salix brachista HOM05D000108 ORTHO05D001724 1.2e-09 66.6 41 80.5
SEGI_24234 Sequoiadendron giganteum HOM05D007858 ORTHO05D026325 2.6e-09 65.5 44 72.7
FAN06G1809 Fragaria x ananassa HOM05D000108 ORTHO05D001724 3.4e-09 65.1 42 71.4
HanXRQChr13g0425171 Helianthus annuus HOM05D000108 ORTHO05D001724 4.9e-08 61.2 44 75.0
Actinidia27398 Actinidia chinensis HOM05D000108 ORTHO05D026325 1.9e-07 59.3 42 69.0
Actinidia27427 Actinidia chinensis HOM05D000108 ORTHO05D001724 9.3e-07 57.0 35 80.0
ClCG08G007710 Citrullus lanatus HOM05D000108 ORTHO05D001724 2.7e-06 55.5 44 63.6
Glyma.01G144500 Glycine max HOM05D000108 ORTHO05D001724 2.7e-06 55.5 34 76.5
AUR62038481 Chenopodium quinoa HOM05D000108 ORTHO05D001724 3.5e-06 55.1 42 64.3
Atru.chr5.324 Acer truncatum HOM05D000108 ORTHO05D001724 6.0e-06 54.3 31 80.6
Sc02g0002520 Simmondsia chinensis HOM05D000108 ORTHO05D001724 6.0e-06 54.3 34 73.5
RcHm_v2.0_Chr7g0200461 Rosa chinensis HOM05D000108 ORTHO05D001724 7.8e-06 53.9 34 76.5


User provided reference genes

Program Settings