Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g33990 Coffea canephora HOM05D000998 ORTHO05D000806 4.1e-24 114.0 62 100.0
Cc11_g05930 Coffea canephora HOM05D000998 ORTHO05D000806 4.4e-18 94.0 62 85.5
Dinv14376 Davidia involucrata HOM05D000998 ORTHO05D000806 4.6e-15 84.0 58 75.9
Hma1.2p1_1450F.1_g284250 Hydrangea macrophylla HOM05D000998 ORTHO05D000806 6.0e-15 83.6 58 75.9
Dinv05680 Davidia involucrata HOM05D000998 ORTHO05D000806 7.8e-15 83.2 58 74.1
TWI74G0070 Tripterygium wilfordii HOM05D000998 ORTHO05D000806 7.8e-15 83.2 59 71.2
DCAR_026816 Daucus carota HOM05D000998 ORTHO05D000806 3.9e-14 80.9 59 69.5
MSTRG.12229 Avicennia marina HOM05D000998 ORTHO05D000806 6.6e-14 80.1 59 69.5
Lj6P732T46 Lonicera japonica HOM05D000998 ORTHO05D000806 6.6e-14 80.1 58 72.4
Nitab4.5_0000137g0170 Nicotiana tabacum HOM05D000998 ORTHO05D000806 8.6e-14 79.7 61 67.2
Nitab4.5_0005541g0060 Nicotiana tabacum HOM05D000998 ORTHO05D000806 1.1e-13 79.3 61 65.6
Peaxi162Scf00064g01323 Petunia axillaris HOM05D000998 ORTHO05D000806 1.9e-13 78.6 61 67.2
Migut.D00871 Erythranthe guttata HOM05D000998 ORTHO05D000806 2.5e-13 78.2 59 69.5
Oeu027912.1 Olea europaea HOM05D000998 ORTHO05D000806 2.5e-13 78.2 56 75.0
Actinidia34055 Actinidia chinensis HOM05D000998 ORTHO05D000806 5.6e-13 77.0 58 65.5
Peaxi162Scf01169g00018 Petunia axillaris HOM05D000998 ORTHO05D000806 9.5e-13 76.3 62 69.4
HanXRQChr08g0224831 Helianthus annuus HOM05D000998 ORTHO05D000806 2.1e-12 75.1 56 66.1
Ciclev10017511m.g Citrus clementina HOM05D000998 ORTHO05D000806 2.8e-12 74.7 55 69.1
Duzib251G0175 Durio zibethinus HOM05D000998 ORTHO05D000806 6.2e-12 73.6 59 61.0
Lj3A860T47 Lonicera japonica HOM05D000998 ORTHO05D000806 1.8e-11 72.0 59 64.4
PGR142G4448 Punica granatum HOM05D000998 ORTHO05D000806 1.8e-11 72.0 62 59.7
PGSC0003DMG400022792 Solanum tuberosum HOM05D000998 ORTHO05D000806 2.3e-11 71.6 56 66.1
Lsat_1_v5_gn_4_22960 Lactuca sativa HOM05D000998 ORTHO05D000806 3.1e-11 71.2 58 67.2
CAN.G282.110 Capsicum annuum HOM05D000998 ORTHO05D000806 4.0e-11 70.9 56 64.3
Nitab4.5_0002521g0040 Nicotiana tabacum HOM05D000998 ORTHO05D000806 5.2e-11 70.5 57 61.4
TAR622G1267 Trochodendron aralioides HOM05D000001 ORTHO05D010426 1.2e-10 69.3 58 60.3
GSVIVG01011606001 Vitis vinifera HOM05D000998 ORTHO05D000806 1.5e-10 68.9 59 61.0
Aqoxy3G04107 Aquilegia oxysepala HOM05D000998 ORTHO05D000806 2.0e-10 68.6 58 62.1
Solyc01g005140.3 Solanum lycopersicum HOM05D000998 ORTHO05D000806 2.0e-10 68.6 56 62.5
Sopen01g001170 Solanum pennellii HOM05D000998 ORTHO05D000806 2.0e-10 68.6 56 62.5
ECA234G3085 Erigeron canadensis HOM05D000998 ORTHO05D000806 2.6e-10 68.2 57 64.9
HanXRQChr17g0566111 Helianthus annuus HOM05D000998 ORTHO05D000806 2.6e-10 68.2 58 62.1
Peaxi162Scf00086g00616 Petunia axillaris HOM05D000998 ORTHO05D000806 4.4e-10 67.4 58 60.3
Aqoxy3G04106 Aquilegia oxysepala HOM05D000998 ORTHO05D000806 7.5e-10 66.6 58 62.1
ECA234G4811 Erigeron canadensis HOM05D000998 ORTHO05D000806 7.5e-10 66.6 58 60.3
TAR374G0250 Trochodendron aralioides HOM05D000998 ORTHO05D000806 9.8e-10 66.2 59 57.6
PSO447G0137 Papaver somniferum HOM05D000998 ORTHO05D000806 2.9e-09 64.7 58 56.9
Prupe.1G336700 Prunus persica HOM05D000998 ORTHO05D000806 2.9e-09 64.7 60 55.0
HanXRQChr16g0527291 Helianthus annuus HOM05D000998 ORTHO05D000806 3.7e-09 64.3 58 56.9
AUR62040071 Chenopodium quinoa HOM05D000998 ORTHO05D000806 6.4e-09 63.5 56 57.1
Lj2g0010956 Lotus japonicus HOM05D000998 ORTHO05D000806 6.4e-09 63.5 59 55.9
TPR.G34571 Trifolium pratense HOM05D000998 ORTHO05D000806 6.4e-09 63.5 60 56.7
Psat6g050480 Pisum sativum HOM05D000998 ORTHO05D000806 8.3e-09 63.2 60 58.3
CANSAT78G0014 Cannabis sativa HOM05D000998 ORTHO05D000806 1.4e-08 62.4 58 55.2
Medtr1g033360 Medicago truncatula HOM05D000998 ORTHO05D000806 1.4e-08 62.4 60 56.7
Eucgr.G02076 Eucalyptus grandis HOM05D000998 ORTHO05D000806 2.4e-08 61.6 62 56.5
MBI19_g10907_MAGBIO Magnolia biondii HOM05D000998 ORTHO05D000806 2.4e-08 61.6 56 55.4
Thecc.02G305300 Theobroma cacao HOM05D000998 ORTHO05D000806 2.4e-08 61.6 59 55.9
Cpa.g.sc2.139 Carica papaya HOM05D000998 ORTHO05D000806 3.2e-08 61.2 61 52.5
MD16G1014600 Malus domestica HOM05D000998 ORTHO05D000806 9.2e-08 59.7 60 55.0
Gohir.A03G112500 Gossypium hirsutum HOM05D000998 ORTHO05D000806 1.6e-07 58.9 56 53.6
Gorai.005G153100 Gossypium raimondii HOM05D000998 ORTHO05D000806 1.6e-07 58.9 56 53.6
Hund05617 Selenicereus undatus HOM05D000998 ORTHO05D000806 2.1e-07 58.5 59 57.6
Gohir.D02G137050 Gossypium hirsutum HOM05D000998 ORTHO05D000806 2.7e-07 58.2 56 53.6
MD13G1016700 Malus domestica HOM05D000998 ORTHO05D000806 3.5e-07 57.8 60 50.0
Sc17g0004210 Simmondsia chinensis HOM05D000998 ORTHO05D000806 4.6e-07 57.4 59 45.8
GSVIVG01011607001 Vitis vinifera HOM05D000998 ORTHO05D000806 2.3e-06 55.1 55 61.8
TAR622G0589 Trochodendron aralioides HOM05D000833 ORTHO05D000969 3.0e-06 54.7 49 57.1
arahy.Tifrunner.gnm1.ann1.5K62BL Arachis hypogaea HOM05D000998 ORTHO05D000806 5.1e-06 53.9 59 50.8
ClCG07G006790 Citrullus lanatus HOM05D000998 ORTHO05D000806 5.1e-06 53.9 62 46.8
Phvul.003G014600 Phaseolus vulgaris HOM05D000998 ORTHO05D000806 5.1e-06 53.9 59 49.2


User provided reference genes

Program Settings