Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g33710 Coffea canephora HOM05D029954 ORTHO05D022123 1.2e-43 179.5 93 100.0
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 1.3e-08 63.2 58 53.4
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 1.4e-07 59.7 58 50.0
COL.COLO4_28935 Corchorus olitorius HOM05D007230 ORTHO05D004756 1.8e-07 59.3 37 78.4
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 1.8e-07 59.3 36 77.8
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.8e-07 59.3 83 44.6
PSO170G3518 Papaver somniferum HOM05D007230 ORTHO05D004756 3.1e-07 58.5 47 61.7
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.1e-07 58.5 53 60.4
CSS0005903 Camellia sinensis var. sinensis HOM05D029954 ORTHO05D022123 4.0e-07 58.2 81 42.0
PSO144G0017 Papaver somniferum HOM05D007230 ORTHO05D004756 4.0e-07 58.2 69 50.7
CSS0042954 Camellia sinensis var. sinensis HOM05D029954 ORTHO05D022123 5.3e-07 57.8 81 43.2
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 5.3e-07 57.8 45 64.4
PSO017G2245 Papaver somniferum HOM05D000002 ORTHO05D000001 6.9e-07 57.4 36 75.0
vmacro04005 Vaccinium macrocarpon HOM05D006655 ORTHO05D007986 6.9e-07 57.4 73 45.2
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 1.2e-06 56.6 51 56.9
CSS0008768 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.5e-06 56.2 36 72.2
CSS0016560 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.5e-06 56.2 36 72.2
CSS0040737 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-06 56.2 36 72.2
CSS0046673 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.5e-06 56.2 36 72.2
CSS0047750 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.5e-06 56.2 36 72.2
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 2.0e-06 55.8 51 54.9
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 2.6e-06 55.5 51 54.9
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 2.6e-06 55.5 51 54.9
Rhsim06G0147600 Rhododendron simsii HOM05D007230 ORTHO05D022123 2.6e-06 55.5 53 56.6
SHI15740 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-06 55.5 39 61.5
TWI59G1424 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 2.6e-06 55.5 59 52.5
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.4e-06 55.1 53 58.5
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.4e-06 55.1 53 56.6
SHI32448 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-06 55.1 51 51.0
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 3.4e-06 55.1 51 51.0
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-06 55.1 51 51.0
Actinidia05629 Actinidia chinensis HOM05D007230 ORTHO05D004756 4.4e-06 54.7 40 62.5
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.4e-06 54.7 82 42.7
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.4e-06 54.7 82 42.7
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.4e-06 54.7 82 42.7
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.4e-06 54.7 82 42.7
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 5.8e-06 54.3 51 52.9
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.8e-06 54.3 53 56.6
TPR.G13973 Trifolium pratense HOM05D007230 ORTHO05D004756 5.8e-06 54.3 39 64.1
MD02G1156200 Malus domestica HOM05D000002 ORTHO05D004756 7.6e-06 53.9 59 50.8
PSO675G6160 Papaver somniferum HOM05D000002 ORTHO05D004756 7.6e-06 53.9 98 41.8
Potri.013G133550 Populus trichocarpa HOM05D010459 ORTHO05D004756 7.6e-06 53.9 54 55.6
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 7.6e-06 53.9 53 56.6
SHI02490 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-06 53.9 51 51.0
SHI03218 Sapria himalayana HOM05D007230 ORTHO05D004756 7.6e-06 53.9 51 51.0
SHI11692 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-06 53.9 51 51.0
SHI12633 Sapria himalayana HOM05D000002 ORTHO05D004756 7.6e-06 53.9 51 51.0
SHI17244 Sapria himalayana HOM05D007230 ORTHO05D004756 7.6e-06 53.9 51 51.0
SHI24644 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-06 53.9 39 61.5
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-06 53.9 51 51.0
SHI31374 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-06 53.9 51 51.0
SHI41657 Sapria himalayana HOM05D000002 ORTHO05D004756 7.6e-06 53.9 51 51.0
SHI45862 Sapria himalayana HOM05D007230 ORTHO05D004756 7.6e-06 53.9 51 51.0
SHI53716 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-06 53.9 39 61.5
SHI54737 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-06 53.9 51 51.0
CSS0002158 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 9.9e-06 53.5 36 63.9
CSS0005225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.9e-06 53.5 36 63.9
CSS0049081 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 9.9e-06 53.5 36 66.7
PSO063G0989 Papaver somniferum HOM05D007230 ORTHO05D004756 9.9e-06 53.5 47 57.4
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 9.9e-06 53.5 40 60.0
Sabra18G0086500 Salix brachista HOM05D007230 ORTHO05D004756 9.9e-06 53.5 42 57.1
SHI02112 Sapria himalayana HOM05D000002 ORTHO05D000001 9.9e-06 53.5 51 51.0
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 9.9e-06 53.5 51 51.0
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 9.9e-06 53.5 51 49.0


User provided reference genes

Program Settings