Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g33310 Coffea canephora HOM05D003469 ORTHO05D029064 1.9e-79 299.3 173 100.0
Cc05_g03240 Coffea canephora HOM05D003469 ORTHO05D029064 9.7e-23 110.9 56 98.2
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 4.7e-17 92.0 45 97.8
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 2.0e-12 76.6 104 61.5
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 2.7e-12 76.3 43 81.4
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 2.7e-12 76.3 43 81.4
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 7.7e-12 74.7 98 61.2
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 1.7e-11 73.6 50 72.0
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 3.8e-11 72.4 45 71.1
Lj9A422T78 Lonicera japonica HOM05D003469 ORTHO05D029064 6.5e-11 71.6 56 58.9
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 3.2e-10 69.3 45 66.7
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 2.7e-09 66.2 106 39.6
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 1.4e-08 63.9 55 54.5
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 2.0e-07 60.1 45 60.0
Oeu035042.1 Olea europaea HOM05D003469 ORTHO05D004084 2.6e-07 59.7 41 65.9
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 3.4e-07 59.3 43 62.8
SEGI_31377 Sequoiadendron giganteum HOM05D003469 ORTHO05D029064 4.4e-07 58.9 44 65.9
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 5.7e-07 58.5 103 41.7
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 5.7e-07 58.5 37 70.3
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 5.7e-07 58.5 37 70.3
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 5.7e-07 58.5 45 62.2
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 7.5e-07 58.2 45 60.0
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 7.5e-07 58.2 44 65.9
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 7.5e-07 58.2 44 65.9
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 9.8e-07 57.8 46 65.2
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 9.8e-07 57.8 45 68.9
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 1.7e-06 57.0 45 62.2
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 2.2e-06 56.6 45 64.4
TAR633G1719 Trochodendron aralioides HOM05D003469 ORTHO05D004084 2.2e-06 56.6 45 60.0
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 3.7e-06 55.8 36 77.8
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 3.7e-06 55.8 46 56.5
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 4.9e-06 55.5 55 50.9
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 6.3e-06 55.1 44 59.1
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 8.3e-06 54.7 45 62.2


User provided reference genes

Program Settings