Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g32570 Coffea canephora HOM05D020204 ORTHO05D000010 4.5e-72 275.4 259 100.0
Cc00_g34550 Coffea canephora HOM05D000021 ORTHO05D000010 6.5e-31 138.7 193 78.8
Cc00_g33970 Coffea canephora HOM05D000021 ORTHO05D000010 4.7e-29 132.5 193 77.2
Cc00_g23110 Coffea canephora HOM05D000021 ORTHO05D000010 8.0e-29 131.7 193 76.2
Cc00_g15350 Coffea canephora HOM05D000021 ORTHO05D000010 2.0e-24 117.1 185 75.7
Cc00_g15340 Coffea canephora HOM05D020204 ORTHO05D000010 1.3e-23 114.4 181 77.3
Cc09_g06890 Coffea canephora HOM05D000021 ORTHO05D000010 1.8e-20 104.0 232 77.6
Cc09_g06850 Coffea canephora HOM05D000021 ORTHO05D152980 1.3e-18 97.8 191 66.0
Cc09_g06870 Coffea canephora HOM05D000021 ORTHO05D000010 3.8e-15 86.3 174 73.0
Cc00_g25650 Coffea canephora HOM05D000021 ORTHO05D000010 3.3e-14 83.2 97 55.7
Cc00_g34940 Coffea canephora HOM05D000021 ORTHO05D000010 3.6e-13 79.7 97 51.5
Cc09_g06900 Coffea canephora HOM05D000021 ORTHO05D000010 1.5e-11 74.3 90 90.0
Cc00_g23120 Coffea canephora HOM05D020204 ORTHO05D153560 1.8e-09 67.4 118 89.8
Cc03_g12270 Coffea canephora HOM05D000021 ORTHO05D000010 4.1e-09 66.2 103 44.7
Cc10_g10760 Coffea canephora HOM05D020204 ORTHO05D000010 4.1e-09 66.2 84 51.2
Cc05_g00250 Coffea canephora HOM05D000021 ORTHO05D000010 2.7e-08 63.5 101 41.6
Cc00_g26510 Coffea canephora HOM05D000021 ORTHO05D000010 1.3e-07 61.2 101 44.6
Cc02_g15450 Coffea canephora HOM05D000021 ORTHO05D000010 1.7e-07 60.8 100 41.0
Cc09_g05550 Coffea canephora HOM05D000021 ORTHO05D000010 2.3e-07 60.5 101 42.6
Cc05_g00240 Coffea canephora HOM05D000021 ORTHO05D000010 3.9e-07 59.7 101 40.6
Cc05_g00270 Coffea canephora HOM05D000021 ORTHO05D000010 5.0e-07 59.3 102 40.2
Cc09_g05580 Coffea canephora HOM05D000021 ORTHO05D000010 8.6e-07 58.5 100 42.0
Cc09_g05600 Coffea canephora HOM05D000021 ORTHO05D000010 8.6e-07 58.5 100 43.0
Cc00_g30700 Coffea canephora HOM05D000021 ORTHO05D000010 1.5e-06 57.8 97 41.2
Cc09_g05470 Coffea canephora HOM05D000021 ORTHO05D000010 1.5e-06 57.8 98 43.9
Cc09_g05730 Coffea canephora HOM05D000021 ORTHO05D000010 2.5e-06 57.0 100 42.0
Cc00_g24400 Coffea canephora HOM05D000021 ORTHO05D000010 3.3e-06 56.6 96 41.7
Cc02_g15270 Coffea canephora HOM05D000021 ORTHO05D000010 3.3e-06 56.6 97 43.3
Cc09_g05670 Coffea canephora HOM05D000021 ORTHO05D000010 4.3e-06 56.2 100 41.0
Cc02_g15280 Coffea canephora HOM05D000021 ORTHO05D000010 7.3e-06 55.5 97 41.2
Cc02_g15310 Coffea canephora HOM05D000021 ORTHO05D000010 7.3e-06 55.5 97 40.2
Cc10_g10450 Coffea canephora HOM05D000021 ORTHO05D000010 7.3e-06 55.5 100 40.0


User provided reference genes

Program Settings