Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 7.1e-47 190.3 97 100.0
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 7.6e-25 117.1 75 81.3
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 2.2e-24 115.5 90 70.0
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 2.2e-24 115.5 83 79.5
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 2.9e-24 115.2 90 67.8
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 3.8e-24 114.8 76 84.2
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 3.8e-24 114.8 69 88.4
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 3.8e-24 114.8 90 70.0
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 4.9e-24 114.4 91 71.4
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 4.9e-24 114.4 90 68.9
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 4.9e-24 114.4 90 68.9
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 4.9e-24 114.4 90 68.9
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 6.4e-24 114.0 78 80.8
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 6.4e-24 114.0 69 89.9
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 6.4e-24 114.0 78 80.8
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 6.4e-24 114.0 90 67.8
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 6.4e-24 114.0 69 89.9
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 6.4e-24 114.0 81 75.3
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 8.4e-24 113.6 90 68.9
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 8.4e-24 113.6 90 68.9
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 8.4e-24 113.6 78 80.8
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 8.4e-24 113.6 78 80.8
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 8.4e-24 113.6 78 80.8
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 8.4e-24 113.6 69 87.0
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 8.4e-24 113.6 90 68.9
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 1.1e-23 113.2 69 85.5
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 1.1e-23 113.2 90 67.8
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 1.1e-23 113.2 60 98.3
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 1.1e-23 113.2 91 69.2
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 1.4e-23 112.8 90 67.8
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 1.4e-23 112.8 66 87.9
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 1.9e-23 112.5 69 88.4
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 1.9e-23 112.5 60 96.7
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 2.4e-23 112.1 69 85.5
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 2.4e-23 112.1 69 85.5
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 2.4e-23 112.1 69 85.5
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 2.4e-23 112.1 90 66.7
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 2.4e-23 112.1 69 85.5
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 2.4e-23 112.1 69 85.5
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 2.4e-23 112.1 60 96.7
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 3.2e-23 111.7 76 81.6
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 3.2e-23 111.7 69 85.5
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 3.2e-23 111.7 69 85.5
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 3.2e-23 111.7 69 85.5
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 3.2e-23 111.7 69 85.5
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 3.2e-23 111.7 69 84.1
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 3.2e-23 111.7 78 76.9
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 3.2e-23 111.7 69 84.1
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 4.2e-23 111.3 60 96.7
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 4.2e-23 111.3 60 96.7
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 4.2e-23 111.3 60 96.7
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 4.2e-23 111.3 78 76.9
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 4.2e-23 111.3 69 84.1
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 4.2e-23 111.3 61 93.4
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 5.5e-23 110.9 78 76.9
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 5.5e-23 110.9 78 76.9
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 5.5e-23 110.9 69 85.5
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 5.5e-23 110.9 69 84.1
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 5.5e-23 110.9 69 82.6
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 5.5e-23 110.9 69 85.5
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 7.1e-23 110.5 90 65.6
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 7.1e-23 110.5 90 65.6
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 7.1e-23 110.5 69 84.1
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 7.1e-23 110.5 80 73.8
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 9.3e-23 110.2 69 84.1
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 9.3e-23 110.2 69 82.6
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 9.3e-23 110.2 60 95.0
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 9.3e-23 110.2 69 82.6
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 1.2e-22 109.8 78 75.6
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.2e-22 109.8 78 75.6
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 1.6e-22 109.4 60 93.3
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 1.6e-22 109.4 78 75.6
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 2.1e-22 109.0 90 63.3
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 8.7e-21 103.6 59 88.1
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.6e-19 99.4 73 72.6
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 1.1e-18 96.7 90 56.7
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 5.5e-15 84.3 141 43.3
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 1.3e-11 73.2 79 48.1
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 1.1e-10 70.1 65 61.5
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 3.1e-10 68.6 44 81.8
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 6.9e-10 67.4 44 79.5
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 6.9e-10 67.4 44 79.5
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.7e-08 62.8 35 88.6


User provided reference genes

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