Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g31300 Coffea canephora HOM05D002773 ORTHO05D003110 1.1e-39 166.0 78 100.0
Glyma.17G152500 Glycine max HOM05D002773 ORTHO05D003110 5.8e-07 57.4 30 80.0
arahy.Tifrunner.gnm1.ann1.GJ8TLU Arachis hypogaea HOM05D002773 ORTHO05D003110 1.3e-06 56.2 30 80.0
arahy.Tifrunner.gnm1.ann1.R1RU8V Arachis hypogaea HOM05D002773 ORTHO05D003110 1.3e-06 56.2 30 80.0
Lj2g0023193 Lotus japonicus HOM05D002773 ORTHO05D003110 1.3e-06 56.2 30 80.0
Medtr5g013980 Medicago truncatula HOM05D002773 ORTHO05D003110 1.3e-06 56.2 30 80.0
Cpa.g.sc6.410 Carica papaya HOM05D002773 ORTHO05D003110 1.7e-06 55.8 30 80.0
Ca_24633_v3 Cicer arietinum L. HOM05D002773 ORTHO05D003110 1.7e-06 55.8 30 76.7
Haze_08296 Corylus avellana HOM05D002773 ORTHO05D003110 2.2e-06 55.5 30 80.0
Rhsim01G0119500 Rhododendron simsii HOM05D002773 ORTHO05D003110 2.2e-06 55.5 30 80.0
CSS0022491 Camellia sinensis var. sinensis HOM05D002773 ORTHO05D003110 2.9e-06 55.1 30 76.7
CSS0038941 Camellia sinensis var. sinensis HOM05D002773 ORTHO05D003110 2.9e-06 55.1 30 76.7
Glyma.01G201100 Glycine max HOM05D002773 ORTHO05D003110 2.9e-06 55.1 30 80.0
Glyma.11G041100 Glycine max HOM05D002773 ORTHO05D003110 2.9e-06 55.1 30 80.0
VMungo1215G1429 Vigna mungo HOM05D002773 ORTHO05D003110 2.9e-06 55.1 26 88.5
arahy.Tifrunner.gnm1.ann1.85A8RG Arachis hypogaea HOM05D002773 ORTHO05D003110 3.7e-06 54.7 30 76.7
Phvul.002G004600 Phaseolus vulgaris HOM05D002773 ORTHO05D003110 3.7e-06 54.7 30 76.7
Psat2g174680 Pisum sativum HOM05D002773 ORTHO05D003110 3.7e-06 54.7 30 76.7
Sabra03G0057400 Salix brachista HOM05D002773 ORTHO05D003110 3.7e-06 54.7 30 80.0
MSTRG.26030 Avicennia marina HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
Cfa012387 Carpinus fangiana HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
CiPaw.11G087600 Carya illinoinensis HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
AUR62007232 Chenopodium quinoa HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
AUR62018768 Chenopodium quinoa HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
Ciclev10033036m.g Citrus clementina HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
Duzib084G1029 Durio zibethinus HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
Duzib205G0838 Durio zibethinus HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
Migut.A00007 Erythranthe guttata HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
FvH4_5g21150 Fragaria vesca HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
FAN04G1510 Fragaria x ananassa HOM05D002773 ORTHO05D003110 4.9e-06 54.3 31 80.6
FAN13G2331 Fragaria x ananassa HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
Gohir.A08G159500 Gossypium hirsutum HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
Gohir.D08G179900 Gossypium hirsutum HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
Gorai.004G188400 Gossypium raimondii HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
HanXRQChr08g0227951 Helianthus annuus HOM05D002773 ORTHO05D003110 4.9e-06 54.3 42 64.3
MD06G1040700 Malus domestica HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
MD16G1269000 Malus domestica HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
RcHm_v2.0_Chr7g0208281 Rosa chinensis HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
SalBow4G1827 Salvia bowleyana HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
SGA_v2.0_scaffold64G22004 Striga asiatica HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
Thecc.03G233900 Theobroma cacao HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
TWI15G0115 Tripterygium wilfordii HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 80.0
unitig_32.g10884 Utricularia gibba HOM05D002773 ORTHO05D003110 4.9e-06 54.3 30 76.7
EL10Ac5g12194 Beta vulgaris HOM05D002773 ORTHO05D003110 6.4e-06 53.9 26 84.6
Gohir.A03G002700 Gossypium hirsutum HOM05D002773 ORTHO05D003110 6.4e-06 53.9 30 76.7
Lsat_1_v5_gn_6_67201 Lactuca sativa HOM05D002773 ORTHO05D003110 6.4e-06 53.9 44 59.1
Prupe.5G047000 Prunus persica HOM05D002773 ORTHO05D003110 6.4e-06 53.9 30 80.0
Gohir.D03G169600 Gossypium hirsutum HOM05D002773 ORTHO05D003110 8.3e-06 53.5 30 73.3
Gorai.003G179900 Gossypium raimondii HOM05D002773 ORTHO05D003110 8.3e-06 53.5 30 73.3
Hma1.2p1_0414F.1_g147750 Hydrangea macrophylla HOM05D002773 ORTHO05D003110 8.3e-06 53.5 30 73.3
Nitab4.5_0006693g0040 Nicotiana tabacum HOM05D002773 ORTHO05D003110 8.3e-06 53.5 30 76.7
Peaxi162Scf00084g00923 Petunia axillaris HOM05D002773 ORTHO05D003110 8.3e-06 53.5 30 76.7
Sc01g0007750 Simmondsia chinensis HOM05D002773 ORTHO05D003110 8.3e-06 53.5 30 76.7
VMungo1215G2547 Vigna mungo HOM05D002773 ORTHO05D003110 8.3e-06 53.5 30 76.7


User provided reference genes

Program Settings