Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 2.2e-119 432.6 260 100.0
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 1.5e-112 409.8 260 95.4
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 2.1e-69 266.5 261 59.4
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 4.6e-69 265.4 257 60.3
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 1.0e-68 264.2 267 59.6
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 3.0e-68 262.7 257 65.8
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 2.5e-67 259.6 260 60.0
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 5.7e-67 258.5 264 59.5
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 2.8e-66 256.1 255 58.8
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 3.7e-66 255.8 257 58.4
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 2.4e-65 253.1 251 61.4
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 2.0e-64 250.0 257 59.5
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 7.7e-64 248.1 261 59.0
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 1.7e-63 246.9 261 65.9
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 8.5e-63 244.6 259 57.1
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 1.1e-62 244.2 262 56.1
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 1.9e-62 243.4 257 59.5
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 2.5e-62 243.0 240 60.0
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 7.2e-62 241.5 244 57.8
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 1.6e-61 240.4 256 59.4
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 2.7e-61 239.6 263 58.2
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 4.6e-61 238.8 256 59.4
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 4.6e-61 238.8 258 55.8
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 4.6e-61 238.8 240 59.6
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 6.1e-61 238.4 259 64.5
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 7.9e-61 238.0 244 61.5
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 1.8e-60 236.9 263 58.6
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 1.8e-60 236.9 235 60.0
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 2.3e-60 236.5 233 58.8
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 8.8e-60 234.6 265 54.3
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 8.8e-60 234.6 262 55.0
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 1.1e-59 234.2 252 56.3
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 2.0e-59 233.4 256 56.2
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 9.7e-59 231.1 246 62.2
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 1.7e-58 230.3 244 59.8
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 1.7e-58 230.3 244 58.6
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 2.2e-58 229.9 252 66.7
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 2.2e-58 229.9 233 59.2
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 2.8e-58 229.6 233 58.8
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 2.8e-58 229.6 261 61.7
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 2.8e-58 229.6 257 56.8
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 3.7e-58 229.2 244 58.2
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 6.3e-58 228.4 258 54.3
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 1.4e-57 227.3 232 60.3
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 1.4e-57 227.3 231 59.3
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 1.8e-57 226.9 232 60.3
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 3.1e-57 226.1 255 54.5
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 5.3e-57 225.3 257 54.1
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 5.3e-57 225.3 271 53.9
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 6.9e-57 224.9 240 57.1
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 9.1e-57 224.6 263 56.7
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 9.1e-57 224.6 233 58.8
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 1.2e-56 224.2 243 55.6
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 1.5e-56 223.8 234 64.1
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 1.5e-56 223.8 274 52.6
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 1.5e-56 223.8 265 52.8
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 2.0e-56 223.4 234 59.0
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 4.5e-56 222.2 269 52.4
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.0e-55 221.1 232 56.0
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 1.3e-55 220.7 252 57.9
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 5.0e-55 218.8 246 55.3
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 8.5e-55 218.0 236 55.9
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 2.5e-54 216.5 230 58.7
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.2e-53 214.2 232 55.6
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 1.6e-53 213.8 233 53.2
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 2.1e-53 213.4 246 55.3
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 3.6e-53 212.6 258 57.8
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 6.1e-53 211.8 321 45.8
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 6.1e-53 211.8 258 62.4
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 1.4e-52 210.7 258 57.4
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 1.4e-52 210.7 258 57.4
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 3.0e-52 209.5 291 50.9
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 3.9e-52 209.1 233 52.8
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 5.2e-52 208.8 226 54.4
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 5.2e-52 208.8 220 63.2
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 6.7e-52 208.4 243 53.5
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 5.7e-51 205.3 258 60.9
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 1.3e-50 204.1 223 57.4
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 2.8e-50 203.0 244 58.6
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 2.8e-50 203.0 235 54.0
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 2.8e-50 203.0 221 54.8
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 6.3e-50 201.8 244 52.0
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 8.2e-50 201.4 252 51.6
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 1.8e-49 200.3 244 51.2
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 1.6e-48 197.2 213 58.2
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 4.5e-48 195.7 231 53.2
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 8.5e-47 191.4 257 49.8
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 1.1e-46 191.0 229 51.5
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 2.5e-46 189.9 261 47.1
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 7.2e-46 188.3 257 49.0
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 1.6e-45 187.2 226 48.7
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 3.0e-44 183.0 138 73.2
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 6.7e-44 181.8 223 48.0
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 2.0e-43 180.3 255 46.3
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 3.3e-43 179.5 223 48.4
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 3.3e-43 179.5 223 48.4
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 4.4e-43 179.1 227 46.7
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 5.7e-43 178.7 226 49.1
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 7.5e-43 178.3 223 48.0
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 8.2e-42 174.9 250 48.8
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 1.4e-41 174.1 227 46.3
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 1.4e-41 174.1 223 49.3
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 1.4e-41 174.1 223 49.3
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 1.4e-41 174.1 224 49.6
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 1.4e-41 174.1 248 44.8
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 3.1e-41 172.9 223 46.2
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 7.0e-41 171.8 126 72.2
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 9.1e-41 171.4 247 54.7
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 2.0e-40 170.2 223 48.9
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 3.5e-40 169.5 228 44.7
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 1.3e-39 167.5 126 73.0
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 7.5e-35 151.8 240 41.2
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 4.7e-29 132.5 122 63.9
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 3.0e-28 129.8 169 49.1
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 3.0e-28 129.8 277 35.7
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 1.2e-24 117.9 128 51.6
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 1.2e-24 117.9 127 53.5
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 1.7e-23 114.0 257 32.3
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 3.3e-22 109.8 118 55.1
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 1.6e-21 107.5 98 61.2
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 2.1e-21 107.1 125 48.8
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 2.8e-13 80.1 114 44.7
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.1e-12 78.2 218 33.0
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 2.4e-09 67.0 120 40.0
AL1G65220 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 6.6e-07 58.9 54 57.4


User provided reference genes

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