Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g30930 Coffea canephora HOM05D003129 ORTHO05D000610 1.8e-54 215.7 113 100.0
DCAR_006587 Daucus carota HOM05D003129 ORTHO05D004326 8.8e-33 143.7 83 85.5
Hma1.2p1_0155F.1_g068510 Hydrangea macrophylla HOM05D003129 ORTHO05D004326 3.4e-32 141.7 87 82.8
MSTRG.15833 Avicennia marina HOM05D003129 ORTHO05D004326 4.4e-32 141.4 87 80.5
Dinv40631 Davidia involucrata HOM05D003129 ORTHO05D004326 2.2e-31 139.0 87 80.5
Hma1.2p1_0608F.1_g188220 Hydrangea macrophylla HOM05D003129 ORTHO05D004326 2.2e-31 139.0 87 80.5
Dinv17376 Davidia involucrata HOM05D003129 ORTHO05D004326 4.9e-31 137.9 89 80.9
Oeu062328.1 Olea europaea HOM05D003129 ORTHO05D000610 4.9e-31 137.9 87 78.2
Lsat_1_v5_gn_4_50661 Lactuca sativa HOM05D003129 ORTHO05D004326 1.1e-30 136.7 87 77.0
SalBow8G3208 Salvia bowleyana HOM05D003129 ORTHO05D004326 1.1e-30 136.7 87 77.0
Migut.M01074 Erythranthe guttata HOM05D003129 ORTHO05D004326 5.4e-30 134.4 87 77.0
HanXRQChr11g0327221 Helianthus annuus HOM05D003129 ORTHO05D004326 2.7e-29 132.1 87 74.7
Sopen10g004580 Solanum pennellii HOM05D003129 ORTHO05D004326 1.0e-28 130.2 87 79.3
Lj2A294T71 Lonicera japonica HOM05D003129 ORTHO05D004326 1.3e-28 129.8 84 76.2
Solyc10g008800.4 Solanum lycopersicum HOM05D003129 ORTHO05D004326 2.3e-28 129.0 87 78.2
SGA_v2.0_scaffold66G22240 Striga asiatica HOM05D003129 ORTHO05D004326 8.6e-28 127.1 89 70.8
HanXRQChr04g0117191 Helianthus annuus HOM05D003129 ORTHO05D004326 3.3e-27 125.2 87 72.4
HanXRQChr07g0188631 Helianthus annuus HOM05D003129 ORTHO05D000610 3.3e-27 125.2 89 71.9
ECA236G4078 Erigeron canadensis HOM05D003129 ORTHO05D004326 4.3e-27 124.8 87 70.1
HanXRQChr15g0481311 Helianthus annuus HOM05D003129 ORTHO05D004326 7.3e-27 124.0 87 73.6
Ciclev10014801m.g Citrus clementina HOM05D003129 ORTHO05D004326 1.2e-26 123.2 87 74.7
Nn1g06337 Nelumbo nucifera HOM05D003129 ORTHO05D004326 1.2e-26 123.2 87 71.3
Rhsim02G0138500 Rhododendron simsii HOM05D003129 ORTHO05D004326 1.6e-26 122.9 83 74.7
GSVIVG01021154001 Vitis vinifera HOM05D003129 ORTHO05D004326 1.6e-26 122.9 87 73.6
AUR62014921 Chenopodium quinoa HOM05D003129 ORTHO05D004326 2.1e-26 122.5 83 77.1
TAR624G0766 Trochodendron aralioides HOM05D003129 ORTHO05D004326 2.8e-26 122.1 87 73.6
Hund21191 Selenicereus undatus HOM05D003129 ORTHO05D004326 6.1e-26 120.9 98 66.3
vmacro15954 Vaccinium macrocarpon HOM05D003129 ORTHO05D004326 8.0e-26 120.6 83 73.5
Sc05g0007260 Simmondsia chinensis HOM05D003129 ORTHO05D004326 1.0e-25 120.2 83 75.9
TAR627G0274 Trochodendron aralioides HOM05D003129 ORTHO05D004326 1.0e-25 120.2 87 71.3
Ah.10g033800 Amaranthus hybridus HOM05D003129 ORTHO05D004326 4.0e-25 118.2 86 72.1
Aqoxy1G02212 Aquilegia oxysepala HOM05D003129 ORTHO05D004326 6.8e-25 117.5 87 67.8
Cpa.g.c47045 Carica papaya HOM05D003129 ORTHO05D000610 6.8e-25 117.5 87 71.3
Cpa.g.sc7.28 Carica papaya HOM05D003129 ORTHO05D004326 6.8e-25 117.5 87 71.3
AUR62031128 Chenopodium quinoa HOM05D003129 ORTHO05D004326 8.9e-25 117.1 79 77.2
MBI06_g25719_MAGBIO Magnolia biondii HOM05D003129 ORTHO05D004326 8.9e-25 117.1 82 73.2
Atru.chr10.1742 Acer truncatum HOM05D003129 ORTHO05D004326 1.2e-24 116.7 87 70.1
MD05G1306200 Malus domestica HOM05D003129 ORTHO05D004326 1.2e-24 116.7 87 69.0
RcHm_v2.0_Chr5g0009911 Rosa chinensis HOM05D003129 ORTHO05D004326 1.2e-24 116.7 83 73.5
Peaxi162Scf00269g00314 Petunia axillaris HOM05D003129 ORTHO05D004326 1.5e-24 116.3 87 70.1
Prupe.4G056400 Prunus persica HOM05D003129 ORTHO05D004326 1.5e-24 116.3 87 70.1
EL10Ac8g20476 Beta vulgaris HOM05D003129 ORTHO05D004326 2.0e-24 115.9 84 69.0
FvH4_3g08240 Fragaria vesca HOM05D003129 ORTHO05D004326 2.0e-24 115.9 83 72.3
FAN11G2423 Fragaria x ananassa HOM05D003129 ORTHO05D004326 2.0e-24 115.9 83 72.3
Gohir.A06G200950 Gossypium hirsutum HOM05D003129 ORTHO05D004326 2.0e-24 115.9 87 67.8
Gohir.A06G201000 Gossypium hirsutum HOM05D003129 ORTHO05D004326 2.0e-24 115.9 87 67.8
Gohir.D06G208800 Gossypium hirsutum HOM05D003129 ORTHO05D004326 2.0e-24 115.9 87 67.8
Gorai.010G242700 Gossypium raimondii HOM05D003129 ORTHO05D004326 2.0e-24 115.9 87 67.8
Manes.17G052000 Manihot esculenta HOM05D003129 ORTHO05D004326 2.0e-24 115.9 87 67.8
FAN16G1697 Fragaria x ananassa HOM05D003129 ORTHO05D004326 2.6e-24 115.5 83 72.3
Lalb_Chr05g0218661 Lupinus albus HOM05D003129 ORTHO05D004326 3.4e-24 115.2 87 69.0
Duzib235G0248 Durio zibethinus HOM05D003129 ORTHO05D004326 5.7e-24 114.4 87 67.8
Gohir.A10G029400 Gossypium hirsutum HOM05D003129 ORTHO05D004326 5.7e-24 114.4 87 69.0
Gohir.D10G029900 Gossypium hirsutum HOM05D003129 ORTHO05D004326 5.7e-24 114.4 87 69.0
Gorai.011G031800 Gossypium raimondii HOM05D003129 ORTHO05D004326 5.7e-24 114.4 87 69.0
arahy.Tifrunner.gnm1.ann1.32PFVB Arachis hypogaea HOM05D003129 ORTHO05D004326 7.5e-24 114.0 87 69.0
arahy.Tifrunner.gnm1.ann1.X0U75U Arachis hypogaea HOM05D003129 ORTHO05D004326 7.5e-24 114.0 87 69.0
Ca_26044_v3 Cicer arietinum L. HOM05D003129 ORTHO05D004326 7.5e-24 114.0 87 69.0
Psat7g118240 Pisum sativum HOM05D003129 ORTHO05D004326 7.5e-24 114.0 87 69.0
CANSAT35G1487 Cannabis sativa HOM05D003129 ORTHO05D004326 9.8e-24 113.6 87 67.8
FAN25G1535 Fragaria x ananassa HOM05D003129 ORTHO05D004326 9.8e-24 113.6 83 71.1
Thecc.06G176900 Theobroma cacao HOM05D003129 ORTHO05D004326 9.8e-24 113.6 87 67.8
FAN21G0899 Fragaria x ananassa HOM05D003129 ORTHO05D004326 1.3e-23 113.2 85 68.2
Lj4g0011162 Lotus japonicus HOM05D003129 ORTHO05D004326 1.7e-23 112.8 87 67.8
CSS0027425 Camellia sinensis var. sinensis HOM05D003129 ORTHO05D004326 2.2e-23 112.5 87 59.8
CSS0050257 Camellia sinensis var. sinensis HOM05D003129 ORTHO05D004326 2.2e-23 112.5 87 59.8
ClCG01G023490 Citrullus lanatus HOM05D003129 ORTHO05D004326 2.2e-23 112.5 87 65.5
MELO3C007237.2 Cucumis melo HOM05D003129 ORTHO05D004326 2.2e-23 112.5 87 66.7
CsaV3_6G050610 Cucumis sativus L. HOM05D003129 ORTHO05D004326 2.9e-23 112.1 87 66.7
Glyma.07G203600 Glycine max HOM05D003129 ORTHO05D004326 2.9e-23 112.1 87 66.7
Lalb_Chr09g0327941 Lupinus albus HOM05D003129 ORTHO05D004326 2.9e-23 112.1 87 67.8
MD10G1285200 Malus domestica HOM05D003129 ORTHO05D004326 2.9e-23 112.1 87 66.7
Phvul.003G057200 Phaseolus vulgaris HOM05D003129 ORTHO05D004326 2.9e-23 112.1 87 66.7
VMungo0251G0702 Vigna mungo HOM05D003129 ORTHO05D004326 2.9e-23 112.1 87 66.7
Nitab4.5_0002114g0030 Nicotiana tabacum HOM05D003129 ORTHO05D004326 4.9e-23 111.3 87 70.1
Actinidia35228 Actinidia chinensis HOM05D003129 ORTHO05D004326 8.3e-23 110.5 87 63.2
MBI07_g06431_MAGBIO Magnolia biondii HOM05D003129 ORTHO05D000022 1.1e-22 110.2 83 66.3
Duzib192G0848 Durio zibethinus HOM05D003129 ORTHO05D004326 1.8e-22 109.4 87 65.5
Lj1C835G5 Lonicera japonica HOM05D003129 ORTHO05D004326 1.8e-22 109.4 87 63.2
ECA234G1267 Erigeron canadensis HOM05D003129 ORTHO05D004326 2.4e-22 109.0 87 64.4
GSVIVG01014247001 Vitis vinifera HOM05D003129 ORTHO05D004326 2.4e-22 109.0 87 63.2
Aqoxy4G00539 Aquilegia oxysepala HOM05D003129 ORTHO05D004326 3.2e-22 108.6 80 67.5
Dinv14957 Davidia involucrata HOM05D003129 ORTHO05D004326 3.2e-22 108.6 87 63.2
Glyma.13G172200 Glycine max HOM05D003129 ORTHO05D004326 4.1e-22 108.2 83 67.5
Actinidia18785 Actinidia chinensis HOM05D003129 ORTHO05D004326 5.4e-22 107.8 99 55.6
PGR004G1912 Punica granatum HOM05D003129 ORTHO05D004326 5.4e-22 107.8 87 65.5
DCAR_019584 Daucus carota HOM05D003129 ORTHO05D004326 7.0e-22 107.5 87 63.2
Sed0018741 Sechium edule HOM05D003129 ORTHO05D004326 9.2e-22 107.1 87 65.5
Medtr4g087935 Medicago truncatula HOM05D003129 ORTHO05D004326 1.2e-21 106.7 86 64.0
THA.LOC104812630 Tarenaya hassleriana HOM05D003129 ORTHO05D004326 1.2e-21 106.7 84 65.5
PSO675G6268 Papaver somniferum HOM05D003129 ORTHO05D004326 1.6e-21 106.3 87 63.2
PSO541G6176 Papaver somniferum HOM05D003129 ORTHO05D004326 2.0e-21 105.9 87 62.1
THA.LOC104814245 Tarenaya hassleriana HOM05D003129 ORTHO05D004326 2.0e-21 105.9 84 64.3
MSTRG.14212 Avicennia marina HOM05D003129 ORTHO05D004326 2.7e-21 105.5 87 60.9
Peaxi162Scf00027g00106 Petunia axillaris HOM05D003129 ORTHO05D004326 3.5e-21 105.1 87 63.2
SGA_v2.0_scaffold130G34337 Striga asiatica HOM05D003129 ORTHO05D004326 3.5e-21 105.1 99 56.6
Cfa000558 Carpinus fangiana HOM05D003129 ORTHO05D004326 4.6e-21 104.8 83 66.3
Haze_06317 Corylus avellana HOM05D003129 ORTHO05D004326 4.6e-21 104.8 83 66.3
vmacro09507 Vaccinium macrocarpon HOM05D003129 ORTHO05D004326 5.9e-21 104.4 87 60.9
SalBow7G0623 Salvia bowleyana HOM05D003129 ORTHO05D004326 7.8e-21 104.0 87 59.8
SalBow7G1178 Salvia bowleyana HOM05D003129 ORTHO05D004326 7.8e-21 104.0 87 59.8
SHI34906 Sapria himalayana HOM05D003129 ORTHO05D000610 1.3e-20 103.2 87 62.1
ATR0602G129 Amborella trichopoda HOM05D003129 ORTHO05D004326 1.7e-20 102.8 84 60.7
CiPaw.09G066600 Carya illinoinensis HOM05D003129 ORTHO05D004326 1.7e-20 102.8 83 66.3
Potri.011G062500 Populus trichocarpa HOM05D003129 ORTHO05D004326 1.7e-20 102.8 83 63.9
Sabra11G0044300 Salix brachista HOM05D003129 ORTHO05D004326 3.0e-20 102.1 84 63.1
Aa31LG9G13850 Aethionema arabicum HOM05D003129 ORTHO05D004326 5.0e-20 101.3 83 61.4
Eucgr.D00571 Eucalyptus grandis HOM05D003129 ORTHO05D004326 5.0e-20 101.3 83 65.1
AL4G29920 Arabidopsis lyrata HOM05D003129 ORTHO05D004326 6.6e-20 100.9 88 60.2
AT2G34040 Arabidopsis thaliana HOM05D003129 ORTHO05D004326 6.6e-20 100.9 88 60.2
CAN.G1119.14 Capsicum annuum HOM05D003129 ORTHO05D004326 6.6e-20 100.9 82 62.2
Thhalv10016466m.g Eutrema salsugineum HOM05D003129 ORTHO05D004326 6.6e-20 100.9 88 60.2
VMungo1215G1428 Vigna mungo HOM05D003129 ORTHO05D000610 6.6e-20 100.9 99 56.6
BcaC01g05811 Brassica carinata HOM05D003129 ORTHO05D004326 8.6e-20 100.5 83 60.2
C03p22160 Brassica napus HOM05D003129 ORTHO05D004326 8.6e-20 100.5 83 60.2
BolC3t14601H Brassica oleracea HOM05D003129 ORTHO05D004326 8.6e-20 100.5 83 60.2
BraA03t11158Z Brassica rapa HOM05D003129 ORTHO05D004326 8.6e-20 100.5 83 60.2
CiPaw.10G055300 Carya illinoinensis HOM05D003129 ORTHO05D004326 8.6e-20 100.5 89 61.8
TPR.G16267 Trifolium pratense HOM05D003129 ORTHO05D004326 8.6e-20 100.5 87 59.8
BcaB01g03907 Brassica carinata HOM05D003129 ORTHO05D004326 1.1e-19 100.1 83 60.2
CDE02G2353 Ceratophyllum demersum HOM05D003129 ORTHO05D004326 1.1e-19 100.1 87 55.2
Sopen10g003050 Solanum pennellii HOM05D003129 ORTHO05D004326 1.5e-19 99.8 83 61.4
TWI63G0550 Tripterygium wilfordii HOM05D003129 ORTHO05D004326 1.5e-19 99.8 88 61.4
Aa31LG6G11500 Aethionema arabicum HOM05D003129 ORTHO05D004326 1.9e-19 99.4 83 60.2
Rhsim04G0023800 Rhododendron simsii HOM05D003129 ORTHO05D004326 1.9e-19 99.4 87 57.5
Sabra04G0033100 Salix brachista HOM05D003129 ORTHO05D004326 1.9e-19 99.4 87 59.8
Migut.H01970 Erythranthe guttata HOM05D003129 ORTHO05D004326 2.5e-19 99.0 87 57.5
Solyc10g007150.4 Solanum lycopersicum HOM05D003129 ORTHO05D004326 3.3e-19 98.6 86 59.3
TWI38G0456 Tripterygium wilfordii HOM05D003129 ORTHO05D004326 3.3e-19 98.6 88 61.4
Carub.0004s1567 Capsella rubella HOM05D003129 ORTHO05D004326 4.3e-19 98.2 88 59.1
TWI38G1536 Tripterygium wilfordii HOM05D003129 ORTHO05D004326 4.3e-19 98.2 95 60.0
CARHR128120 Cardamine hirsuta HOM05D003129 ORTHO05D004326 5.6e-19 97.8 85 57.6
Sp4g16390 Schrenkiella parvula HOM05D003129 ORTHO05D004326 5.6e-19 97.8 83 59.0
C04p15070 Brassica napus HOM05D003129 ORTHO05D004326 9.5e-19 97.1 83 59.0
Cc05_g11500 Coffea canephora HOM05D003129 ORTHO05D004326 9.5e-19 97.1 87 58.6
Potri.004G052300 Populus trichocarpa HOM05D003129 ORTHO05D004326 1.2e-18 96.7 87 58.6
HPP92_002946 Vanilla planifolia HOM05D003129 ORTHO05D004326 2.8e-18 95.5 81 58.0
COL.COLO4_31382 Corchorus olitorius HOM05D003129 ORTHO05D004326 8.0e-18 94.0 103 51.5
Mapoly0091s0056 Marchantia polymorpha HOM05D003129 ORTHO05D004326 1.1e-17 93.6 77 59.7
unitig_52.g17399 Utricularia gibba HOM05D003129 ORTHO05D004326 1.4e-17 93.2 87 55.2
Sed0013050 Sechium edule HOM05D003129 ORTHO05D004326 2.3e-17 92.4 87 59.8
Thhalv10007287m.g Eutrema salsugineum HOM05D003129 ORTHO05D004326 4.0e-17 91.7 83 56.6
AagrBONN_evm.TU.Sc2ySwM_228.5751 Anthoceros agrestis HOM05D003129 ORTHO05D004326 6.8e-17 90.9 85 57.6
Os02g0313400 Oryza sativa ssp. japonica HOM05D003129 ORTHO05D004326 2.0e-16 89.4 87 50.6
SMO364G0322 Selaginella moellendorffii HOM05D003129 ORTHO05D004326 2.0e-16 89.4 88 55.7
unitig_699.g19233 Utricularia gibba HOM05D003129 ORTHO05D004326 2.0e-16 89.4 83 53.0
AT1G29030 Arabidopsis thaliana HOM05D003129 ORTHO05D004326 2.6e-16 89.0 83 54.2
Pp3c3_22040 Physcomitrium patens HOM05D003129 ORTHO05D004326 4.4e-16 88.2 80 57.5
Carub.0001s2722 Capsella rubella HOM05D003129 ORTHO05D004326 9.8e-16 87.0 82 52.4
AL1G42740 Arabidopsis lyrata HOM05D003129 ORTHO05D004326 1.3e-15 86.7 83 51.8
Zm00001eb203280 Zea mays HOM05D003129 ORTHO05D004326 1.3e-15 86.7 83 50.6
A03p19000 Brassica napus HOM05D003129 ORTHO05D004326 3.7e-15 85.1 112 44.6
Sp1g24960 Schrenkiella parvula HOM05D003129 ORTHO05D004326 3.7e-15 85.1 82 51.2
Zm00001eb235260 Zea mays HOM05D003129 ORTHO05D004326 8.3e-15 84.0 81 50.6
CARHR028240 Cardamine hirsuta HOM05D003129 ORTHO05D004326 1.9e-14 82.8 83 49.4
CDE08G1086 Ceratophyllum demersum HOM05D003129 ORTHO05D000610 1.9e-14 82.8 87 54.0
CBR_g34638 Chara braunii HOM05D003129 ORTHO05D004326 7.8e-13 77.4 80 51.2
A09p37370 Brassica napus HOM05D003129 ORTHO05D004326 2.6e-08 62.4 57 56.1
RcHm_v2.0_Chr1g0362691 Rosa chinensis HOM05D003129 ORTHO05D004326 2.6e-08 62.4 88 47.7
AT3G19515 Arabidopsis thaliana HOM05D003129 ORTHO05D004326 2.2e-07 59.3 77 39.0


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