Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g30770 Coffea canephora HOM05D006336 ORTHO05D007819 1.1e-62 243.0 115 100.0
Cc08_g04520 Coffea canephora HOM05D006336 ORTHO05D007819 4.8e-42 174.5 88 92.0
Solyc08g075100.4 Solanum lycopersicum HOM05D006336 ORTHO05D007819 2.4e-33 145.6 88 76.1
MSTRG.11848 Avicennia marina HOM05D006336 ORTHO05D007819 5.3e-33 144.4 88 75.0
Sopen08g023730 Solanum pennellii HOM05D006336 ORTHO05D007819 5.3e-33 144.4 88 75.0
Nitab4.5_0008763g0010 Nicotiana tabacum HOM05D006336 ORTHO05D007819 9.0e-33 143.7 88 76.1
Peaxi162Scf00014g01816 Petunia axillaris HOM05D006336 ORTHO05D007819 1.2e-32 143.3 88 75.0
PGSC0003DMG400020818 Solanum tuberosum HOM05D006336 ORTHO05D007819 1.2e-32 143.3 88 75.0
SalBow4G0695 Salvia bowleyana HOM05D006336 ORTHO05D007819 1.5e-32 142.9 88 76.1
CAN.G22.30 Capsicum annuum HOM05D006336 ORTHO05D007819 2.0e-32 142.5 88 73.9
PGSC0003DMG400020816 Solanum tuberosum HOM05D006336 ORTHO05D007819 4.5e-32 141.4 88 73.9
Nitab4.5_0024082g0010 Nicotiana tabacum HOM05D006336 ORTHO05D007819 5.8e-32 141.0 88 75.0
Oeu047793.1 Olea europaea HOM05D006336 ORTHO05D007819 1.7e-31 139.4 88 76.1
Migut.A00484 Erythranthe guttata HOM05D006336 ORTHO05D007819 2.2e-31 139.0 88 71.6
Dinv09419 Davidia involucrata HOM05D006336 ORTHO05D007819 8.4e-31 137.1 88 73.9
SGA_v2.0_scaffold89G27365 Striga asiatica HOM05D006336 ORTHO05D007819 8.4e-31 137.1 90 71.1
Hma1.2p1_0262F.1_g105216 Hydrangea macrophylla HOM05D006336 ORTHO05D007819 2.5e-30 135.6 88 69.3
Hma1.2p1_1969F.1_g309520 Hydrangea macrophylla HOM05D006336 ORTHO05D007819 2.5e-30 135.6 88 69.3
Dinv37442 Davidia involucrata HOM05D006336 ORTHO05D007819 4.2e-30 134.8 88 72.7
DCAR_002185 Daucus carota HOM05D006336 ORTHO05D007819 1.2e-29 133.3 99 63.6
Sed0027870 Sechium edule HOM05D006336 ORTHO05D007819 1.6e-29 132.9 88 70.5
AL5G21500 Arabidopsis lyrata HOM05D006336 ORTHO05D007819 2.1e-29 132.5 89 66.3
TAR624G1124 Trochodendron aralioides HOM05D006336 ORTHO05D007819 2.7e-29 132.1 89 68.5
unitig_32.g10956 Utricularia gibba HOM05D006336 ORTHO05D007819 2.7e-29 132.1 87 67.8
AT3G43540 Arabidopsis thaliana HOM05D006336 ORTHO05D007819 3.5e-29 131.7 89 66.3
Ciclev10010538m.g Citrus clementina HOM05D006336 ORTHO05D007819 3.5e-29 131.7 87 65.5
THA.LOC104799597 Tarenaya hassleriana HOM05D006336 ORTHO05D007819 3.5e-29 131.7 88 67.0
COL.COLO4_21171 Corchorus olitorius HOM05D006336 ORTHO05D007819 6.0e-29 131.0 88 64.8
HanXRQChr03g0084651 Helianthus annuus HOM05D006336 ORTHO05D007819 6.0e-29 131.0 88 69.3
MELO3C016932.2 Cucumis melo HOM05D006336 ORTHO05D007819 1.3e-28 129.8 88 67.0
GSVIVG01035507001 Vitis vinifera HOM05D006336 ORTHO05D007819 1.3e-28 129.8 88 70.5
Gorai.010G094300 Gossypium raimondii HOM05D006336 ORTHO05D007819 1.8e-28 129.4 88 67.0
Gohir.A06G081300 Gossypium hirsutum HOM05D006336 ORTHO05D007819 2.3e-28 129.0 88 67.0
TAR636G2611 Trochodendron aralioides HOM05D006336 ORTHO05D007819 2.3e-28 129.0 88 67.0
Manes.03G055500 Manihot esculenta HOM05D006336 ORTHO05D007819 3.0e-28 128.6 87 67.8
CsaV3_4G036230 Cucumis sativus L. HOM05D006336 ORTHO05D007819 3.9e-28 128.3 88 65.9
PSO135G0459 Papaver somniferum HOM05D006336 ORTHO05D007819 3.9e-28 128.3 88 63.6
Aa31LG4G13380 Aethionema arabicum HOM05D006336 ORTHO05D007819 5.1e-28 127.9 88 63.6
Gohir.D06G080900 Gossypium hirsutum HOM05D006336 ORTHO05D007819 5.1e-28 127.9 88 67.0
Lj8C369G2 Lonicera japonica HOM05D006336 ORTHO05D007819 8.7e-28 127.1 88 68.2
Sp5g17620 Schrenkiella parvula HOM05D006336 ORTHO05D007819 8.7e-28 127.1 89 61.8
CARHR098720 Cardamine hirsuta HOM05D006336 ORTHO05D007819 1.5e-27 126.3 89 62.9
Cpa.g.sc82.21 Carica papaya HOM05D006336 ORTHO05D007819 1.5e-27 126.3 88 64.8
ClCG05G015960 Citrullus lanatus HOM05D006336 ORTHO05D007819 1.5e-27 126.3 87 65.5
Lsat_1_v5_gn_6_74301 Lactuca sativa HOM05D006336 ORTHO05D007819 1.5e-27 126.3 88 68.2
Nn6g35635 Nelumbo nucifera HOM05D006336 ORTHO05D007819 1.5e-27 126.3 88 64.8
Potri.006G217700 Populus trichocarpa HOM05D006336 ORTHO05D007819 1.5e-27 126.3 88 65.9
TWI32G0525 Tripterygium wilfordii HOM05D006336 ORTHO05D007819 1.5e-27 126.3 88 65.9
BcaB01g01223 Brassica carinata HOM05D006336 ORTHO05D007819 1.9e-27 125.9 89 61.8
Carub.0005s0929 Capsella rubella HOM05D006336 ORTHO05D007819 1.9e-27 125.9 89 62.9
Os09g0436900 Oryza sativa ssp. japonica HOM05D006336 ORTHO05D007819 1.9e-27 125.9 88 64.8
Duzib187G1166 Durio zibethinus HOM05D006336 ORTHO05D007819 2.5e-27 125.6 88 64.8
Eucgr.C03178 Eucalyptus grandis HOM05D006336 ORTHO05D007819 2.5e-27 125.6 88 65.9
Thecc.09G066700 Theobroma cacao HOM05D006336 ORTHO05D007819 3.3e-27 125.2 88 64.8
A06p22570 Brassica napus HOM05D006336 ORTHO05D007819 4.3e-27 124.8 89 61.8
BraA06t25331Z Brassica rapa HOM05D006336 ORTHO05D007819 4.3e-27 124.8 89 61.8
Thhalv10002575m.g Eutrema salsugineum HOM05D006336 ORTHO05D007819 4.3e-27 124.8 89 61.8
Atru.chr7.1812 Acer truncatum HOM05D006336 ORTHO05D007819 5.7e-27 124.4 88 64.8
Zm00001eb313900 Zea mays HOM05D006336 ORTHO05D007819 5.7e-27 124.4 87 64.4
BcaC01g02096 Brassica carinata HOM05D006336 ORTHO05D007819 7.4e-27 124.0 89 61.8
C03p68560 Brassica napus HOM05D006336 ORTHO05D007819 7.4e-27 124.0 89 61.8
BolC3t19114H Brassica oleracea HOM05D006336 ORTHO05D007819 7.4e-27 124.0 89 61.8
CSS0028971 Camellia sinensis var. sinensis HOM05D006336 ORTHO05D007819 7.4e-27 124.0 88 69.3
Rhsim03G0050100 Rhododendron simsii HOM05D006336 ORTHO05D007819 9.6e-27 123.6 88 67.0
CANSAT25G0260 Cannabis sativa HOM05D006336 ORTHO05D007819 1.6e-26 122.9 88 64.8
CiPaw.13G138600 Carya illinoinensis HOM05D006336 ORTHO05D007819 2.8e-26 122.1 88 62.5
ECA240G3698 Erigeron canadensis HOM05D006336 ORTHO05D007819 2.8e-26 122.1 88 65.9
ATR0681G177 Amborella trichopoda HOM05D006336 ORTHO05D007819 4.8e-26 121.3 88 61.4
Ca_13088_v3 Cicer arietinum L. HOM05D006336 ORTHO05D007819 4.8e-26 121.3 87 62.1
Psat6g024200 Pisum sativum HOM05D006336 ORTHO05D007819 4.8e-26 121.3 87 60.9
RcHm_v2.0_Chr6g0304731 Rosa chinensis HOM05D006336 ORTHO05D007819 8.2e-26 120.6 88 60.2
Aqoxy7G04150 Aquilegia oxysepala HOM05D006336 ORTHO05D007819 1.1e-25 120.2 88 61.4
Lsat_1_v5_gn_3_5840 Lactuca sativa HOM05D006336 ORTHO05D007819 1.8e-25 119.4 93 63.4
Lalb_Chr24g0393711 Lupinus albus HOM05D006336 ORTHO05D007819 3.1e-25 118.6 86 60.5
AUR62021599 Chenopodium quinoa HOM05D006336 ORTHO05D007819 6.9e-25 117.5 88 59.1
MBI13_g01670_MAGBIO Magnolia biondii HOM05D006336 ORTHO05D007819 6.9e-25 117.5 88 59.1
Glyma.17G220200 Glycine max HOM05D006336 ORTHO05D007819 9.0e-25 117.1 87 60.9
Prupe.1G401200 Prunus persica HOM05D006336 ORTHO05D007819 9.0e-25 117.1 87 59.8
arahy.Tifrunner.gnm1.ann1.6DI6VD Arachis hypogaea HOM05D006336 ORTHO05D007819 1.2e-24 116.7 87 59.8
FvH4_2g37050 Fragaria vesca HOM05D006336 ORTHO05D007819 1.2e-24 116.7 88 58.0
FAN27G0198 Fragaria x ananassa HOM05D006336 ORTHO05D007819 1.2e-24 116.7 88 58.0
Sc04g0003070 Simmondsia chinensis HOM05D006336 ORTHO05D007819 1.5e-24 116.3 88 59.1
EL10Ac5g11099 Beta vulgaris HOM05D006336 ORTHO05D007819 2.0e-24 115.9 88 59.1
Lsat_1_v5_gn_6_25780 Lactuca sativa HOM05D006336 ORTHO05D007819 2.0e-24 115.9 90 64.4
Lj5g0013864 Lotus japonicus HOM05D006336 ORTHO05D007819 2.0e-24 115.9 87 57.5
Phvul.001G044100 Phaseolus vulgaris HOM05D006336 ORTHO05D007819 2.0e-24 115.9 87 59.8
TPR.G38941 Trifolium pratense HOM05D006336 ORTHO05D007819 2.0e-24 115.9 87 58.6
Sabra06G0167900 Salix brachista HOM05D006336 ORTHO05D007819 2.6e-24 115.5 88 60.2
MD08G1047000 Malus domestica HOM05D006336 ORTHO05D007819 3.4e-24 115.2 88 59.1
HPP92_019317 Vanilla planifolia HOM05D006336 ORTHO05D007819 3.4e-24 115.2 88 58.0
AUR62008497 Chenopodium quinoa HOM05D006336 ORTHO05D007819 4.5e-24 114.8 88 58.0
Medtr1g014730 Medicago truncatula HOM05D006336 ORTHO05D007819 4.5e-24 114.8 87 56.3
HPP92_019279 Vanilla planifolia HOM05D006336 ORTHO05D007819 5.9e-24 114.4 88 58.0
arahy.Tifrunner.gnm1.ann1.YUGK7S Arachis hypogaea HOM05D006336 ORTHO05D007819 7.6e-24 114.0 87 58.6
Ah.11g048000 Amaranthus hybridus HOM05D006336 ORTHO05D007819 1.3e-23 113.2 88 55.7
VMungo0647G1288 Vigna mungo HOM05D006336 ORTHO05D007819 1.7e-23 112.8 87 58.6
PGR044G0762 Punica granatum HOM05D006336 ORTHO05D007819 6.5e-23 110.9 100 57.0
Haze_18366 Corylus avellana HOM05D006336 ORTHO05D007819 8.4e-23 110.5 113 48.7
Hund02606 Selenicereus undatus HOM05D006336 ORTHO05D007819 8.4e-23 110.5 88 53.4
CDE05G3418 Ceratophyllum demersum HOM05D006336 ORTHO05D007819 1.4e-22 109.8 88 55.7
Cfa017842 Carpinus fangiana HOM05D006336 ORTHO05D007819 3.2e-22 108.6 87 54.0
vmacro07660 Vaccinium macrocarpon HOM05D006336 ORTHO05D007819 6.7e-20 100.9 134 43.3
SMO351G0262 Selaginella moellendorffii HOM05D006336 ORTHO05D007819 3.3e-19 98.6 93 49.5
AagrBONN_evm.TU.Sc2ySwM_362.2113 Anthoceros agrestis HOM05D006336 ORTHO05D007819 9.0e-17 90.5 76 50.0
Mapoly0124s0049 Marchantia polymorpha HOM05D006336 ORTHO05D007819 2.2e-15 85.9 88 43.2
Pp3c1_38250 Physcomitrium patens HOM05D006336 ORTHO05D007819 5.1e-12 74.7 80 47.5
CBR_g30757 Chara braunii HOM05D006336 ORTHO05D007819 2.5e-11 72.4 77 45.5
Ah.01g016210 Amaranthus hybridus HOM05D006336 ORTHO05D007819 3.7e-10 68.6 54 59.3
Cre06.g278264 Chlamydomonas reinhardtii HOM05D006336 ORTHO05D007819 5.0e-07 58.2 83 37.3
PRCOL_00005115 Prasinoderma coloniale HOM05D005986 ORTHO05D007819 2.5e-06 55.8 78 35.9


User provided reference genes

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