Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 4.6e-135 484.6 247 100.0
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 1.4e-38 164.1 299 43.5
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 9.9e-37 157.9 267 46.1
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 8.4e-36 154.8 274 43.4
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.6e-34 150.6 274 43.8
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 2.3e-33 146.7 264 45.8
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 8.7e-33 144.8 269 43.5
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 1.9e-32 143.7 274 44.5
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 5.6e-32 142.1 274 42.7
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 5.6e-32 142.1 274 43.4
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 1.1e-30 137.9 275 44.0
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 1.4e-30 137.5 274 42.3
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 4.0e-30 136.0 246 44.3
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 1.5e-29 134.0 235 44.3
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 4.5e-29 132.5 276 43.5
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 3.8e-28 129.4 286 38.8
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 8.4e-28 128.3 210 46.7
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 8.4e-28 128.3 230 42.6
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 8.4e-28 128.3 267 42.3
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.1e-27 127.9 250 42.8
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 1.9e-27 127.1 285 39.3
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 2.1e-26 123.6 231 41.1
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 2.7e-26 123.2 241 40.2
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 3.5e-26 122.9 260 41.9
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.6e-26 122.5 289 39.4
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 4.6e-26 122.5 268 39.9
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 6.0e-26 122.1 231 40.3
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.0e-25 121.3 232 44.0
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 1.0e-25 121.3 229 41.5
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 1.3e-25 120.9 186 49.5
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 1.3e-25 120.9 247 44.1
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 6.7e-25 118.6 247 40.9
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 8.7e-25 118.2 281 40.6
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 8.7e-25 118.2 235 41.7
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 5.6e-24 115.5 232 39.7
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 5.6e-24 115.5 287 38.0
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 7.4e-24 115.2 267 39.7
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 1.3e-23 114.4 161 46.0
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 2.8e-23 113.2 247 43.3
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 8.1e-23 111.7 290 38.6
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.4e-22 110.9 279 39.1
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 1.8e-22 110.5 161 45.3
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 1.8e-22 110.5 275 38.5
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 1.8e-22 110.5 288 37.8
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.4e-22 110.2 287 38.0
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 5.3e-22 109.0 183 41.0
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 1.2e-21 107.8 290 37.2
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 2.6e-21 106.7 292 33.2
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 3.4e-21 106.3 280 34.6
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 7.6e-21 105.1 254 37.4
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.3e-20 104.4 158 46.8
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 3.8e-20 102.8 184 41.8
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 4.9e-20 102.4 260 38.8
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 1.9e-19 100.5 228 38.6
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.2e-19 99.4 260 38.5
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 4.2e-19 99.4 258 37.6
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 2.3e-17 93.6 200 39.5
Dinv31866 Davidia involucrata HOM05D000068 ORTHO05D000084 3.0e-17 93.2 179 45.3
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 6.7e-17 92.0 248 36.3
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 3.3e-16 89.7 230 39.6
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 4.3e-16 89.4 113 52.2
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 5.7e-16 89.0 248 35.9
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 1.3e-15 87.8 172 39.5
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 1.3e-15 87.8 254 33.5
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 2.8e-15 86.7 191 37.2
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 2.8e-15 86.7 260 34.2
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 1.1e-14 84.7 198 38.4
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.8e-14 84.0 194 39.2
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 2.4e-14 83.6 227 36.1
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 5.3e-14 82.4 132 44.7
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 9.0e-14 81.6 279 31.5
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 1.2e-13 81.3 273 31.9
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 2.0e-13 80.5 261 34.1
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 4.5e-13 79.3 235 38.3
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 7.6e-13 78.6 257 31.1
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 5.0e-12 75.9 232 32.8
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 6.5e-12 75.5 183 38.8
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 3.2e-11 73.2 232 31.5
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 2.1e-10 70.5 229 33.2
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 2.7e-10 70.1 188 36.2
ClCG05G015580 Citrullus lanatus HOM05D007731 ORTHO05D008483 7.9e-10 68.6 59 64.4
BraA07t29330Z Brassica rapa HOM05D009961 ORTHO05D008483 2.3e-09 67.0 247 34.8
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 2.3e-09 67.0 242 31.8
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 3.0e-09 66.6 180 35.0
A07p16020 Brassica napus HOM05D009961 ORTHO05D008483 3.0e-09 66.6 249 34.9
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 8.7e-09 65.1 46 65.2
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 8.7e-09 65.1 179 34.1
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 8.7e-09 65.1 179 34.1
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 8.7e-09 65.1 179 34.1
unitig_749.g13899 Utricularia gibba HOM05D007731 ORTHO05D008483 8.7e-09 65.1 196 34.7
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 1.1e-08 64.7 46 65.2
BolC7t42871H Brassica oleracea HOM05D009961 ORTHO05D008483 1.5e-08 64.3 249 33.3
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 3.3e-08 63.2 55 60.0
AT1G20070 Arabidopsis thaliana HOM05D009961 ORTHO05D008483 5.7e-08 62.4 250 30.8
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 7.4e-08 62.0 177 33.9
CARHR020550 Cardamine hirsuta HOM05D009961 ORTHO05D008483 1.3e-07 61.2 249 34.1
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 2.8e-07 60.1 250 31.2
ATR0712G013 Amborella trichopoda HOM05D007731 ORTHO05D008483 3.7e-07 59.7 160 40.6
Aa31LG7G4510 Aethionema arabicum HOM05D009961 ORTHO05D008483 6.3e-07 58.9 47 61.7
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 1.1e-06 58.2 187 32.6
Migut.N03172 Erythranthe guttata HOM05D007731 ORTHO05D008483 2.4e-06 57.0 154 37.7
Thhalv10008606m.g Eutrema salsugineum HOM05D009961 ORTHO05D008483 2.4e-06 57.0 181 33.1
AL1G32880 Arabidopsis lyrata HOM05D009961 ORTHO05D008483 5.3e-06 55.8 177 35.0


User provided reference genes

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