Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g27870 Coffea canephora HOM05D000021 ORTHO05D000010 2.2e-104 383.3 381 100.0
Cc03_g13310 Coffea canephora HOM05D000021 ORTHO05D000010 8.4e-27 125.6 343 58.6
Cc08_g08660 Coffea canephora HOM05D000021 ORTHO05D000010 1.3e-24 118.2 450 60.9
Cc03_g13290 Coffea canephora HOM05D000021 ORTHO05D000010 1.3e-22 111.7 390 67.4
Cc00_g10290 Coffea canephora HOM05D000021 ORTHO05D000010 1.3e-19 101.7 444 59.9
Cc00_g11260 Coffea canephora HOM05D000021 ORTHO05D000010 6.5e-19 99.4 320 67.2
Cc00_g11280 Coffea canephora HOM05D000021 ORTHO05D000010 6.5e-19 99.4 322 67.7
Cc08_g08750 Coffea canephora HOM05D000021 ORTHO05D000010 6.5e-19 99.4 409 62.8
Cc00_g21320 Coffea canephora HOM05D000021 ORTHO05D000010 7.1e-18 95.9 323 64.4
Cc00_g16560 Coffea canephora HOM05D000021 ORTHO05D000010 1.5e-15 88.2 445 54.8
Cc08_g08720 Coffea canephora HOM05D000021 ORTHO05D000010 7.4e-15 85.9 298 70.1
Cc03_g13280 Coffea canephora HOM05D000021 ORTHO05D000010 6.2e-14 82.8 374 50.5
Cc08_g08120 Coffea canephora HOM05D000021 ORTHO05D000010 1.1e-13 82.0 365 59.5
Cc00_g30100 Coffea canephora HOM05D000021 ORTHO05D000010 1.8e-13 81.3 147 57.8
Cc03_g13330 Coffea canephora HOM05D000021 ORTHO05D000010 1.8e-13 81.3 324 57.7
Cc08_g08770 Coffea canephora HOM05D000021 ORTHO05D000010 1.8e-13 81.3 317 67.8
Cc03_g13350 Coffea canephora HOM05D000021 ORTHO05D000010 9.0e-13 79.0 147 37.4
Cc00_g25240 Coffea canephora HOM05D000021 ORTHO05D000010 2.0e-12 77.8 249 50.2
Cc00_g10300 Coffea canephora HOM05D000021 ORTHO05D000010 1.3e-11 75.1 288 70.8
Cc00_g20840 Coffea canephora HOM05D000021 ORTHO05D000010 2.9e-11 73.9 320 43.4
Cc00_g22930 Coffea canephora HOM05D000021 ORTHO05D000010 2.9e-11 73.9 166 47.0
Cc08_g08730 Coffea canephora HOM05D000021 ORTHO05D000010 6.5e-11 72.8 93 49.5
Cc00_g11270 Coffea canephora HOM05D000021 ORTHO05D000010 7.2e-10 69.3 286 70.3
Cc00_g33400 Coffea canephora HOM05D000021 ORTHO05D000010 1.2e-09 68.6 108 64.8
Cc00_g12960 Coffea canephora HOM05D000021 ORTHO05D000010 2.7e-09 67.4 194 43.3
MD00G1043900 Malus domestica HOM05D000021 ORTHO05D000010 4.6e-09 66.6 90 36.7
Cc00_g10310 Coffea canephora HOM05D000021 ORTHO05D000010 5.1e-08 63.2 119 62.2
Cc08_g08110 Coffea canephora HOM05D000021 ORTHO05D000010 8.7e-08 62.4 135 54.8
Duzib114G0687 Durio zibethinus HOM05D000021 ORTHO05D000010 2.5e-07 60.8 94 36.2
Cc00_g12930 Coffea canephora HOM05D000021 ORTHO05D000010 4.3e-07 60.1 160 50.6
MD07G1220100 Malus domestica HOM05D000021 ORTHO05D000010 4.3e-07 60.1 89 38.2
Cc00_g00860 Coffea canephora HOM05D000021 ORTHO05D000010 5.7e-07 59.7 56 53.6
MD00G1048300 Malus domestica HOM05D000021 ORTHO05D000010 9.7e-07 58.9 90 36.7
MD00G1063000 Malus domestica HOM05D000021 ORTHO05D000010 2.2e-06 57.8 70 41.4
MD07G1219300 Malus domestica HOM05D000021 ORTHO05D000010 2.8e-06 57.4 70 42.9
Cc00_g16550 Coffea canephora HOM05D000021 ORTHO05D000010 3.7e-06 57.0 57 54.4
Cc00_g25250 Coffea canephora HOM05D000021 ORTHO05D000010 4.8e-06 56.6 148 41.2
MD07G1219100 Malus domestica HOM05D000021 ORTHO05D000010 4.8e-06 56.6 57 47.4
Aa31LG4G14480 Aethionema arabicum HOM05D000021 ORTHO05D000010 6.3e-06 56.2 69 46.4
Manes.10G015515 Manihot esculenta HOM05D000021 ORTHO05D000010 6.3e-06 56.2 30 73.3
Manes.10G015729 Manihot esculenta HOM05D000021 ORTHO05D000010 6.3e-06 56.2 30 73.3
Cc00_g27850 Coffea canephora HOM05D000021 ORTHO05D000010 8.2e-06 55.8 32 75.0
MD07G1218700 Malus domestica HOM05D000021 ORTHO05D000010 8.2e-06 55.8 90 35.6
PGR004G0081 Punica granatum HOM05D000021 ORTHO05D000010 8.2e-06 55.8 93 38.7


User provided reference genes

Program Settings