Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g27250 Coffea canephora HOM05D006056 ORTHO05D007136 8.1e-88 327.0 162 100.0
Cc08_g11260 Coffea canephora HOM05D006056 ORTHO05D007136 4.2e-60 235.0 120 95.0
Migut.B01239 Erythranthe guttata HOM05D006056 ORTHO05D007136 2.6e-30 136.0 114 61.4
Dinv44692 Davidia involucrata HOM05D006056 ORTHO05D007136 3.8e-29 132.1 118 61.9
Haze_03023 Corylus avellana HOM05D006056 ORTHO05D007136 3.2e-28 129.0 119 60.5
CANSAT56G1604 Cannabis sativa HOM05D006056 ORTHO05D007136 4.2e-28 128.6 118 56.8
Actinidia10152 Actinidia chinensis HOM05D006056 ORTHO05D007136 5.5e-28 128.3 122 60.7
Nitab4.5_0005808g0070 Nicotiana tabacum HOM05D006056 ORTHO05D007136 5.5e-28 128.3 123 56.9
Sc10g0004470 Simmondsia chinensis HOM05D006056 ORTHO05D007136 5.5e-28 128.3 110 63.6
MSTRG.16982 Avicennia marina HOM05D006056 ORTHO05D007136 7.2e-28 127.9 113 61.1
Haze_03016 Corylus avellana HOM05D006056 ORTHO05D007136 9.4e-28 127.5 119 60.5
Cpa.g.sc2293.2 Carica papaya HOM05D006056 ORTHO05D007136 1.2e-27 127.1 75 82.7
Lsat_1_v5_gn_9_40260 Lactuca sativa HOM05D006056 ORTHO05D007136 1.6e-27 126.7 101 61.4
Potri.001G028500 Populus trichocarpa HOM05D006056 ORTHO05D007136 1.6e-27 126.7 117 58.1
Actinidia06230 Actinidia chinensis HOM05D006056 ORTHO05D007136 4.7e-27 125.2 98 66.3
EL10Ac2g02787 Beta vulgaris HOM05D006056 ORTHO05D007136 6.1e-27 124.8 118 56.8
Duzib106G1426 Durio zibethinus HOM05D006056 ORTHO05D007136 8.0e-27 124.4 114 59.6
Lalb_Chr04g0264131 Lupinus albus HOM05D006056 ORTHO05D007136 8.0e-27 124.4 96 66.7
arahy.Tifrunner.gnm1.ann1.X1BBAM Arachis hypogaea HOM05D006056 ORTHO05D007136 1.0e-26 124.0 81 72.8
CiPaw.13G014800 Carya illinoinensis HOM05D006056 ORTHO05D007136 1.0e-26 124.0 121 58.7
Sabra01G0020900 Salix brachista HOM05D006056 ORTHO05D007136 1.0e-26 124.0 118 56.8
Thecc.10G150600 Theobroma cacao HOM05D006056 ORTHO05D007136 1.0e-26 124.0 109 59.6
Duzib106G0937 Durio zibethinus HOM05D006056 ORTHO05D007136 1.4e-26 123.6 116 56.9
Nitab4.5_0003481g0070 Nicotiana tabacum HOM05D006056 ORTHO05D007136 1.4e-26 123.6 121 56.2
PGR044G1154 Punica granatum HOM05D006056 ORTHO05D007136 1.4e-26 123.6 76 78.9
Eucgr.G03224 Eucalyptus grandis HOM05D006056 ORTHO05D007136 1.8e-26 123.2 113 61.1
FAN06G0497 Fragaria x ananassa HOM05D006056 ORTHO05D007136 1.8e-26 123.2 96 62.5
THA.LOC104826732 Tarenaya hassleriana HOM05D006056 ORTHO05D007136 1.8e-26 123.2 81 74.1
Prupe.2G039200 Prunus persica HOM05D006056 ORTHO05D007136 2.3e-26 122.9 111 58.6
Solyc01g096480.2 Solanum lycopersicum HOM05D006056 ORTHO05D007136 2.3e-26 122.9 117 56.4
arahy.Tifrunner.gnm1.ann1.6DS776 Arachis hypogaea HOM05D006056 ORTHO05D007136 3.0e-26 122.5 81 71.6
Duzib114G0422 Durio zibethinus HOM05D006056 ORTHO05D007136 3.0e-26 122.5 95 62.1
FAN03G2563 Fragaria x ananassa HOM05D006056 ORTHO05D007136 3.0e-26 122.5 111 55.0
SGA_v2.0_scaffold124G33607 Striga asiatica HOM05D006056 ORTHO05D007136 3.0e-26 122.5 111 56.8
VMungo1080G1125 Vigna mungo HOM05D006056 ORTHO05D007136 3.0e-26 122.5 82 73.2
DCAR_031839 Daucus carota HOM05D006056 ORTHO05D007136 4.0e-26 122.1 95 65.3
HanXRQChr11g0341201 Helianthus annuus HOM05D006056 ORTHO05D007136 4.0e-26 122.1 114 54.4
Manes.04G158100 Manihot esculenta HOM05D006056 ORTHO05D007136 4.0e-26 122.1 118 58.5
Sopen01g040210 Solanum pennellii HOM05D006056 ORTHO05D007136 4.0e-26 122.1 120 57.5
Atru.chr12.1257 Acer truncatum HOM05D006056 ORTHO05D007136 5.2e-26 121.7 119 56.3
Duzib106G1601 Durio zibethinus HOM05D006056 ORTHO05D007136 5.2e-26 121.7 114 57.9
Thhalv10021607m.g Eutrema salsugineum HOM05D006056 ORTHO05D007136 5.2e-26 121.7 111 56.8
Hund13373 Selenicereus undatus HOM05D006056 ORTHO05D007136 5.2e-26 121.7 73 79.5
FvH4_7g03410 Fragaria vesca HOM05D006056 ORTHO05D007136 6.7e-26 121.3 96 61.5
Lj3g0018945 Lotus japonicus HOM05D006056 ORTHO05D007136 6.7e-26 121.3 118 56.8
FAN01G1581 Fragaria x ananassa HOM05D006056 ORTHO05D007136 8.8e-26 120.9 111 55.0
FAN10G2490 Fragaria x ananassa HOM05D006056 ORTHO05D007136 8.8e-26 120.9 89 64.0
Gohir.D10G193500 Gossypium hirsutum HOM05D006056 ORTHO05D007136 8.8e-26 120.9 109 57.8
Gorai.011G216600 Gossypium raimondii HOM05D006056 ORTHO05D007136 8.8e-26 120.9 109 57.8
Nn7g36738 Nelumbo nucifera HOM05D006056 ORTHO05D007136 8.8e-26 120.9 116 57.8
Peaxi162Scf00082g00120 Petunia axillaris HOM05D006056 ORTHO05D007136 8.8e-26 120.9 73 79.5
Lalb_Chr01g0014891 Lupinus albus HOM05D006056 ORTHO05D007136 1.1e-25 120.6 94 66.0
MD07G1048800 Malus domestica HOM05D006056 ORTHO05D007136 1.5e-25 120.2 110 54.5
RcHm_v2.0_Chr1g0325731 Rosa chinensis HOM05D006056 ORTHO05D007136 2.0e-25 119.8 111 55.0
PGSC0003DMG400005407 Solanum tuberosum HOM05D006056 ORTHO05D007136 2.0e-25 119.8 120 57.5
GSVIVG01036664001 Vitis vinifera HOM05D006056 ORTHO05D007136 2.6e-25 119.4 82 73.2
MD02G1283300 Malus domestica HOM05D006056 ORTHO05D007136 4.4e-25 118.6 102 59.8
Medtr3g014240 Medicago truncatula HOM05D006056 ORTHO05D007136 5.7e-25 118.2 119 55.5
QL04p017566 Quercus lobata HOM05D006056 ORTHO05D007136 5.7e-25 118.2 123 53.7
CSS0027846 Camellia sinensis var. sinensis HOM05D006056 ORTHO05D007136 7.5e-25 117.9 120 55.8
SalBow6G0599 Salvia bowleyana HOM05D006056 ORTHO05D007136 7.5e-25 117.9 104 58.7
TWI38G2317 Tripterygium wilfordii HOM05D006056 ORTHO05D007136 7.5e-25 117.9 121 52.1
Carub.0003s0627 Capsella rubella HOM05D006056 ORTHO05D007136 9.7e-25 117.5 112 55.4
C05p60560 Brassica napus HOM05D006056 ORTHO05D007136 1.3e-24 117.1 110 58.2
Aa31LG5G17320 Aethionema arabicum HOM05D006056 ORTHO05D007136 1.7e-24 116.7 106 55.7
Glyma.04G135300 Glycine max HOM05D006056 ORTHO05D007136 1.7e-24 116.7 66 81.8
Phvul.005G025600 Phaseolus vulgaris HOM05D006056 ORTHO05D007136 1.7e-24 116.7 114 54.4
Psat5g221760 Pisum sativum HOM05D006056 ORTHO05D007136 1.7e-24 116.7 86 62.8
BcaC05g30553 Brassica carinata HOM05D006056 ORTHO05D007136 2.2e-24 116.3 111 58.6
AUR62026890 Chenopodium quinoa HOM05D006056 ORTHO05D007136 2.2e-24 116.3 63 82.5
Glyma.11G156500 Glycine max HOM05D006056 ORTHO05D007136 2.2e-24 116.3 119 56.3
Sp3g05700 Schrenkiella parvula HOM05D006056 ORTHO05D007136 2.8e-24 115.9 106 57.5
BraA05t22856Z Brassica rapa HOM05D006056 ORTHO05D007136 3.7e-24 115.5 110 58.2
Nn2g14790 Nelumbo nucifera HOM05D006056 ORTHO05D007136 3.7e-24 115.5 104 60.6
vmacro13759 Vaccinium macrocarpon HOM05D006056 ORTHO05D007136 3.7e-24 115.5 119 57.1
AL3G17840 Arabidopsis lyrata HOM05D006056 ORTHO05D007136 4.8e-24 115.2 114 56.1
A05p41340 Brassica napus HOM05D006056 ORTHO05D007136 4.8e-24 115.2 110 57.3
CAN.G1045.19 Capsicum annuum HOM05D006056 ORTHO05D007136 4.8e-24 115.2 76 73.7
CiPaw.14G008500 Carya illinoinensis HOM05D006056 ORTHO05D007136 4.8e-24 115.2 112 60.7
ClCG08G010680 Citrullus lanatus HOM05D006056 ORTHO05D007136 4.8e-24 115.2 76 71.1
CsaV3_6G035850 Cucumis sativus L. HOM05D006056 ORTHO05D007136 4.8e-24 115.2 77 68.8
BolC5t34710H Brassica oleracea HOM05D006056 ORTHO05D007136 6.3e-24 114.8 110 56.4
BNapus_Darmor_BZH_scaffold_117p00040 Brassica napus HOM05D006056 ORTHO05D007136 8.2e-24 114.4 81 67.9
BraA01t04419Z Brassica rapa HOM05D006056 ORTHO05D007136 8.2e-24 114.4 98 57.1
MELO3C011393.2 Cucumis melo HOM05D006056 ORTHO05D007136 8.2e-24 114.4 77 68.8
TPR.G1448 Trifolium pratense HOM05D006056 ORTHO05D007136 8.2e-24 114.4 62 79.0
AT3G06730 Arabidopsis thaliana HOM05D006056 ORTHO05D007136 1.8e-23 113.2 121 54.5
Rhsim07G0067800 Rhododendron simsii HOM05D006056 ORTHO05D007136 1.8e-23 113.2 116 54.3
Ciclev10002629m.g Citrus clementina HOM05D006056 ORTHO05D007136 2.4e-23 112.8 118 50.0
Sed0016890 Sechium edule HOM05D006056 ORTHO05D007136 2.4e-23 112.8 83 62.7
PSO339G3509 Papaver somniferum HOM05D006056 ORTHO05D007136 3.1e-23 112.5 95 57.9
PSO384G1577 Papaver somniferum HOM05D006056 ORTHO05D007136 5.3e-23 111.7 95 57.9
unitig_736.g22224 Utricularia gibba HOM05D006056 ORTHO05D007136 5.3e-23 111.7 70 72.9
Hma1.2p1_0837F.1_g226030 Hydrangea macrophylla HOM05D006056 ORTHO05D007136 7.0e-23 111.3 61 85.2
BcaC09g47915 Brassica carinata HOM05D006056 ORTHO05D007136 9.1e-23 110.9 63 76.2
BolC1t05590H Brassica oleracea HOM05D006056 ORTHO05D007136 2.7e-22 109.4 63 74.6
Hma1.2p1_0837F.1_g226040 Hydrangea macrophylla HOM05D006056 ORTHO05D007136 2.7e-22 109.4 60 85.0
Ca_12968_v3 Cicer arietinum L. HOM05D006056 ORTHO05D007136 4.5e-22 108.6 61 82.0
MD05G1114000 Malus domestica HOM05D006056 ORTHO05D007136 5.9e-22 108.2 93 58.1
ECA248G1356 Erigeron canadensis HOM05D006056 ORTHO05D007136 2.9e-21 105.9 77 64.9
CDE05G0697 Ceratophyllum demersum HOM05D006056 ORTHO05D007136 7.2e-20 101.3 91 57.1
Gohir.A10G186600 Gossypium hirsutum HOM05D006056 ORTHO05D007136 1.6e-19 100.1 109 54.1
Actinidia12748 Actinidia chinensis HOM05D006056 ORTHO05D007136 4.7e-19 98.6 122 51.6
MBI13_g23031_MAGBIO Magnolia biondii HOM05D006056 ORTHO05D007136 1.4e-18 97.1 51 78.4
Os08g0378900 Oryza sativa ssp. japonica HOM05D006056 ORTHO05D007136 5.2e-18 95.1 56 66.1
Zm00001eb042600 Zea mays HOM05D006056 ORTHO05D007136 6.8e-18 94.7 76 52.6
ATR0782G243 Amborella trichopoda HOM05D006056 ORTHO05D007136 5.7e-17 91.7 78 56.4
HPP92_023265 Vanilla planifolia HOM05D002937 ORTHO05D003063 4.8e-16 88.6 70 55.7
HPP92_023300 Vanilla planifolia HOM05D002937 ORTHO05D003063 6.3e-16 88.2 68 55.9
Medtr1g037680 Medicago truncatula HOM05D006056 ORTHO05D007136 1.2e-14 84.0 42 85.7
CARHR081330 Cardamine hirsuta HOM05D006056 ORTHO05D007136 5.9e-14 81.6 42 83.3
Aqoxy1G00370 Aquilegia oxysepala HOM05D006056 ORTHO05D007136 1.3e-13 80.5 120 40.8
SEGI_00494 Sequoiadendron giganteum HOM05D006056 ORTHO05D007136 1.1e-12 77.4 80 47.5
Lj9A658G61 Lonicera japonica HOM05D006056 ORTHO05D007136 1.5e-12 77.0 42 81.0
Pp3c1_18440 Physcomitrium patens HOM05D006056 ORTHO05D007136 9.5e-12 74.3 64 48.4
CBR_g51450 Chara braunii HOM05D006056 ORTHO05D007136 5.2e-10 68.6 52 55.8
AagrBONN_evm.TU.Sc2ySwM_117.3107 Anthoceros agrestis HOM05D006056 ORTHO05D007136 1.5e-09 67.0 53 50.9
Mapoly0006s0285 Marchantia polymorpha HOM05D006056 ORTHO05D007136 4.4e-09 65.5 49 53.1
MCO07G215 Micromonas commoda HOM05D006056 ORTHO05D007136 3.1e-07 59.3 91 35.2
SMO146G0323 Selaginella moellendorffii HOM05D006056 ORTHO05D007136 1.6e-06 57.0 45 53.3


User provided reference genes

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