Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g26610 Coffea canephora HOM05D005214 ORTHO05D153569 5.5e-147 524.2 259 100.0
MD12G1215600 Malus domestica HOM05D005214 ORTHO05D005861 5.2e-12 75.9 166 32.5
Cc00_g02520 Coffea canephora HOM05D005214 ORTHO05D005861 8.9e-12 75.1 107 43.0
Sc06g0004100 Simmondsia chinensis HOM05D005214 ORTHO05D005861 3.4e-11 73.2 177 30.5
MSTRG.27985 Avicennia marina HOM05D005214 ORTHO05D005861 5.7e-11 72.4 144 34.7
SGA_v2.0_scaffold80G25806 Striga asiatica HOM05D005214 ORTHO05D005861 7.5e-11 72.0 164 31.7
Thecc.05G311600 Theobroma cacao HOM05D005214 ORTHO05D005861 9.8e-11 71.6 151 32.5
Lsat_1_v5_gn_9_87421 Lactuca sativa HOM05D005214 ORTHO05D005861 1.7e-10 70.9 156 31.4
Lalb_Chr18g0045711 Lupinus albus HOM05D005214 ORTHO05D005861 2.8e-10 70.1 144 32.6
arahy.Tifrunner.gnm1.ann1.0P9F65 Arachis hypogaea HOM05D005214 ORTHO05D005861 8.3e-10 68.6 141 34.8
arahy.Tifrunner.gnm1.ann1.P1V9IM Arachis hypogaea HOM05D005214 ORTHO05D005861 8.3e-10 68.6 141 34.8
CiPaw.07G020400 Carya illinoinensis HOM05D005214 ORTHO05D005861 8.3e-10 68.6 154 32.5
Hma1.2p1_1212F.1_g267370 Hydrangea macrophylla HOM05D005214 ORTHO05D005861 1.1e-09 68.2 154 33.1
Oeu040762.1 Olea europaea HOM05D005214 ORTHO05D005861 1.1e-09 68.2 144 32.6
Cfa006617 Carpinus fangiana HOM05D005214 ORTHO05D005861 2.4e-09 67.0 154 31.8
DCAR_022150 Daucus carota HOM05D005214 ORTHO05D005861 2.4e-09 67.0 195 29.7
Prupe.6G322200 Prunus persica HOM05D005214 ORTHO05D005861 2.4e-09 67.0 182 30.2
Haze_04156 Corylus avellana HOM05D005214 ORTHO05D007291 3.2e-09 66.6 154 32.5
Atru.chr2.17 Acer truncatum HOM05D005214 ORTHO05D005861 5.4e-09 65.9 141 33.3
Lj1g0025562 Lotus japonicus HOM05D005214 ORTHO05D005861 5.4e-09 65.9 148 31.1
Ciclev10001167m.g Citrus clementina HOM05D005214 ORTHO05D005861 5.9e-08 62.4 149 32.2
unitig_699.g19247 Utricularia gibba HOM05D005214 ORTHO05D005861 2.9e-07 60.1 147 32.0
Aqoxy2G03015 Aquilegia oxysepala HOM05D005214 ORTHO05D005861 1.1e-06 58.2 127 31.5
TWI12G0218 Tripterygium wilfordii HOM05D005214 ORTHO05D005861 1.1e-06 58.2 140 30.0


User provided reference genes

Program Settings