Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 2.0e-152 542.3 261 100.0
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 3.8e-63 245.7 214 56.1
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 3.0e-60 236.1 205 56.1
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 3.1e-57 226.1 265 47.5
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 8.8e-52 208.0 217 47.5
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 1.3e-50 204.1 255 43.5
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 4.8e-50 202.2 200 52.0
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 9.1e-49 198.0 200 51.0
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 5.9e-48 195.3 288 38.9
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 1.2e-45 187.6 211 44.5
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 4.0e-44 182.6 191 48.2
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 4.0e-44 182.6 242 41.3
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.2e-43 181.0 181 50.3
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 1.2e-43 181.0 198 46.5
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 3.4e-43 179.5 191 47.6
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.3e-42 177.6 178 52.2
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.1e-41 174.5 219 44.3
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 1.4e-41 174.1 170 50.6
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 3.1e-41 172.9 175 50.9
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 5.4e-41 172.2 197 43.1
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 2.0e-40 170.2 215 40.5
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 3.5e-40 169.5 212 39.6
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 7.7e-40 168.3 182 47.3
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 1.1e-38 164.5 204 40.2
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 5.6e-38 162.2 204 39.7
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 5.6e-38 162.2 155 51.6
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 9.5e-38 161.4 212 39.2
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 3.6e-37 159.5 204 38.7
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 5.2e-36 155.6 219 41.6
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 5.7e-35 152.1 241 37.8
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 2.9e-34 149.8 191 39.8
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.1e-33 147.9 260 36.5
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 1.8e-33 147.1 186 43.5
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 4.1e-33 146.0 242 39.3
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 4.6e-32 142.5 155 45.8
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 4.6e-32 142.5 233 39.1
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 3.0e-31 139.8 165 48.5
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 1.5e-30 137.5 249 34.5
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 6.2e-29 132.1 191 41.9
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 3.1e-28 129.8 179 44.1
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 3.1e-28 129.8 179 44.1
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 8.9e-28 128.3 199 37.7
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 2.0e-27 127.1 146 43.2
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 2.6e-27 126.7 167 45.5
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 2.2e-26 123.6 210 38.1
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 2.2e-26 123.6 174 40.2
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 4.9e-26 122.5 143 49.0
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 8.3e-26 121.7 159 43.4
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 1.4e-25 120.9 191 40.3
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 5.4e-25 119.0 197 38.6
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 6.6e-23 112.1 171 36.8
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 1.1e-22 111.3 112 42.9
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 1.2e-21 107.8 168 39.9
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 2.1e-21 107.1 126 42.1
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 2.3e-20 103.6 241 33.2
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 2.0e-19 100.5 241 32.4
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 4.1e-17 92.8 116 41.4
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 7.8e-16 88.6 119 42.0
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 1.7e-15 87.4 69 55.1
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 2.3e-15 87.0 113 42.5
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 1.2e-13 81.3 195 29.7
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 1.5e-11 74.3 108 38.9
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 2.0e-11 73.9 125 30.4
HanXRQChr09g0268661 Helianthus annuus HOM05D008092 ORTHO05D010277 1.3e-10 71.2 61 52.5
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 1.7e-10 70.9 102 41.2
Pp3c3_2330 Physcomitrium patens HOM05D008092 ORTHO05D010277 1.1e-09 68.2 134 34.3
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 1.5e-06 57.8 108 33.3
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 3.3e-06 56.6 43 55.8


User provided reference genes

Program Settings