Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g25250 Coffea canephora HOM05D000021 ORTHO05D000010 2.1e-45 186.4 153 100.0
Cc00_g10290 Coffea canephora HOM05D000021 ORTHO05D000010 2.6e-35 152.9 152 88.2
Cc00_g16560 Coffea canephora HOM05D000021 ORTHO05D000010 2.6e-35 152.9 152 72.4
Cc08_g08750 Coffea canephora HOM05D000021 ORTHO05D000010 2.1e-32 143.3 152 63.2
Cc00_g12930 Coffea canephora HOM05D000021 ORTHO05D000010 5.0e-26 122.1 150 67.3
Cc00_g35350 Coffea canephora HOM05D000021 ORTHO05D000010 1.9e-25 120.2 145 80.7
Cc03_g13330 Coffea canephora HOM05D000021 ORTHO05D000010 1.9e-25 120.2 152 78.9
Cc08_g08720 Coffea canephora HOM05D000021 ORTHO05D000010 6.7e-23 111.7 150 63.3
Cc08_g08110 Coffea canephora HOM05D000021 ORTHO05D000010 1.1e-22 110.9 73 72.6
Cc00_g20840 Coffea canephora HOM05D000021 ORTHO05D000010 1.5e-22 110.5 150 62.7
Cc00_g10280 Coffea canephora HOM05D000021 ORTHO05D000010 2.5e-22 109.8 60 85.0
Cc00_g11260 Coffea canephora HOM05D000021 ORTHO05D000010 4.8e-21 105.5 153 71.9
Cc00_g28910 Coffea canephora HOM05D000021 ORTHO05D000010 4.8e-21 105.5 69 73.9
Cc03_g13350 Coffea canephora HOM05D000021 ORTHO05D000010 1.5e-19 100.5 72 68.1
Cc03_g13300 Coffea canephora HOM05D000021 ORTHO05D000010 2.0e-19 100.1 70 71.4
Cc08_g08660 Coffea canephora HOM05D000021 ORTHO05D000010 2.2e-18 96.7 72 66.7
Cc00_g27850 Coffea canephora HOM05D000021 ORTHO05D000010 3.8e-18 95.9 145 61.4
Cc08_g08650 Coffea canephora HOM05D000021 ORTHO05D000010 1.4e-17 94.0 143 70.6
Cc00_g22930 Coffea canephora HOM05D000021 ORTHO05D000010 1.9e-17 93.6 151 47.0
Cc00_g12960 Coffea canephora HOM05D000021 ORTHO05D000010 4.6e-16 89.0 150 54.0
Cc08_g08740 Coffea canephora HOM05D000021 ORTHO05D000010 4.3e-14 82.4 72 58.3
Cc08_g08120 Coffea canephora HOM05D000021 ORTHO05D000010 4.8e-13 79.0 149 57.0
Cc03_g13290 Coffea canephora HOM05D000021 ORTHO05D000010 4.1e-12 75.9 147 70.1
Cc03_g13310 Coffea canephora HOM05D000021 ORTHO05D000010 4.1e-12 75.9 72 58.3
Cc00_g31830 Coffea canephora HOM05D000021 ORTHO05D000010 9.1e-12 74.7 150 66.7
Cc00_g30100 Coffea canephora HOM05D000021 ORTHO05D000010 5.9e-11 72.0 154 35.1
Cc08_g08760 Coffea canephora HOM05D000021 ORTHO05D000010 3.8e-10 69.3 146 66.4
Hma1.2p1_0142F.1_g064270 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 5.1e-07 58.9 64 43.8
Haze_20653 Corylus avellana HOM05D000053 ORTHO05D000448 2.0e-06 57.0 64 40.6
MBI17_g33050_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 2.0e-06 57.0 65 40.0
MD01G1061800 Malus domestica HOM05D000071 ORTHO05D000029 2.0e-06 57.0 64 43.8
Prupe.2G248400 Prunus persica HOM05D000021 ORTHO05D000010 2.0e-06 57.0 67 47.8
Cc00_g27870 Coffea canephora HOM05D000021 ORTHO05D000010 2.6e-06 56.6 148 41.2
Glyma.16G125200 Glycine max HOM05D000071 ORTHO05D000029 2.6e-06 56.6 71 32.4
Glyma.16G126100 Glycine max HOM05D000071 ORTHO05D000029 2.6e-06 56.6 71 32.4
FvH4_4g32560 Fragaria vesca HOM05D000071 ORTHO05D000029 4.4e-06 55.8 70 40.0
CsaV3_5G005040 Cucumis sativus L. HOM05D000071 ORTHO05D000029 5.7e-06 55.5 70 40.0
Lj8A49T39 Lonicera japonica HOM05D000071 ORTHO05D000029 5.7e-06 55.5 60 43.3
Glyma.16G106200 Glycine max HOM05D000071 ORTHO05D000029 7.4e-06 55.1 64 35.9
Lj7A274G16 Lonicera japonica HOM05D000071 ORTHO05D000029 7.4e-06 55.1 69 42.0
MBI17_g33047_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 7.4e-06 55.1 65 38.5
TAR636G0668 Trochodendron aralioides HOM05D000071 ORTHO05D000029 7.4e-06 55.1 64 43.8
TAR636G1628 Trochodendron aralioides HOM05D000071 ORTHO05D000029 7.4e-06 55.1 64 43.8
Glyma.16G125800 Glycine max HOM05D000071 ORTHO05D000029 9.7e-06 54.7 64 37.5
RcHm_v2.0_Chr2g0175321 Rosa chinensis HOM05D000071 ORTHO05D000029 9.7e-06 54.7 72 37.5
vmacro06674 Vaccinium macrocarpon HOM05D000071 ORTHO05D000029 9.7e-06 54.7 61 41.0


User provided reference genes

Program Settings