Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g25050 Coffea canephora HOM05D000455 ORTHO05D011453 2.7e-103 378.6 190 100.0
Cc06_g21860 Coffea canephora HOM05D000455 ORTHO05D010375 1.3e-36 157.1 142 64.1
Cc11_g02160 Coffea canephora HOM05D000455 ORTHO05D010375 2.2e-36 156.4 124 68.5
Cc06_g21930 Coffea canephora HOM05D000455 ORTHO05D010375 1.2e-34 150.6 124 66.9
Cc07_g19820 Coffea canephora HOM05D000455 ORTHO05D000434 6.0e-34 148.3 127 65.4
Cc06_g21980 Coffea canephora HOM05D000455 ORTHO05D000434 1.8e-33 146.7 120 67.5
Cc00_g29760 Coffea canephora HOM05D000455 ORTHO05D000434 3.9e-33 145.6 120 68.3
Cc06_g21810 Coffea canephora HOM05D000455 ORTHO05D000434 8.7e-33 144.4 136 65.4
Cc00_g25040 Coffea canephora HOM05D000455 ORTHO05D011453 1.3e-31 140.6 115 71.3
Cc06_g22000 Coffea canephora HOM05D000455 ORTHO05D000434 2.5e-24 116.3 93 66.7
Cc00_g22160 Coffea canephora HOM05D000455 ORTHO05D000434 2.2e-23 113.2 94 67.0
Cc00_g35530 Coffea canephora HOM05D000455 ORTHO05D010375 3.1e-22 109.4 84 71.4
Cc06_g22020 Coffea canephora HOM05D000455 ORTHO05D011453 3.1e-22 109.4 111 57.7
Cc06_g21960 Coffea canephora HOM05D000455 ORTHO05D011453 6.9e-22 108.2 104 57.7
Cc06_g21870 Coffea canephora HOM05D000455 ORTHO05D000434 1.6e-18 97.1 104 53.8
Cc11_g02140 Coffea canephora HOM05D000455 ORTHO05D000434 1.8e-14 83.6 76 60.5
Peaxi162Scf00029g02710 Petunia axillaris HOM05D000455 ORTHO05D011453 5.9e-13 78.6 111 42.3
Dinv38771 Davidia involucrata HOM05D000455 ORTHO05D000434 5.0e-12 75.5 120 41.7
Sopen11g024120 Solanum pennellii HOM05D000455 ORTHO05D011453 5.0e-12 75.5 121 42.1
PGSC0003DMG400013616 Solanum tuberosum HOM05D000455 ORTHO05D011453 8.5e-12 74.7 101 44.6
PGSC0003DMG400013619 Solanum tuberosum HOM05D000455 ORTHO05D011453 8.5e-12 74.7 100 43.0
PGSC0003DMG400022031 Solanum tuberosum HOM05D000455 ORTHO05D011453 1.1e-11 74.3 120 40.0
PGSC0003DMG402032501 Solanum tuberosum HOM05D000455 ORTHO05D011453 1.4e-11 73.9 85 47.1
CSS0026143 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 4.2e-11 72.4 121 39.7
PGSC0003DMG400022030 Solanum tuberosum HOM05D000455 ORTHO05D011453 5.5e-11 72.0 81 48.1
Dinv38774 Davidia involucrata HOM05D000455 ORTHO05D000434 7.2e-11 71.6 124 37.9
CSS0010178 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 9.4e-11 71.2 121 39.7
CSS0025475 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 9.4e-11 71.2 121 39.7
Nitab4.5_0000175g0090 Nicotiana tabacum HOM05D000455 ORTHO05D000434 2.1e-10 70.1 84 42.9
PGSC0003DMG401013613 Solanum tuberosum HOM05D000455 ORTHO05D011453 2.1e-10 70.1 101 41.6
CSS0015680 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.7e-10 69.7 121 39.7
Nitab4.5_0003250g0060 Nicotiana tabacum HOM05D000455 ORTHO05D000434 2.7e-10 69.7 97 41.2
CSS0015142 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 4.7e-10 68.9 162 34.6
CSS0018542 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 4.7e-10 68.9 121 38.0
Nitab4.5_0007956g0040 Nicotiana tabacum HOM05D000455 ORTHO05D000434 1.0e-09 67.8 84 44.0
PGSC0003DMG401032501 Solanum tuberosum HOM05D000455 ORTHO05D011453 1.4e-09 67.4 81 46.9
Dinv11542 Davidia involucrata HOM05D000455 ORTHO05D000434 1.8e-09 67.0 102 40.2
Cc04_g07990 Coffea canephora HOM05D000455 ORTHO05D000434 3.9e-09 65.9 87 41.4
PGSC0003DMG400013617 Solanum tuberosum HOM05D000455 ORTHO05D011453 5.1e-09 65.5 84 46.4
Dinv10489 Davidia involucrata HOM05D000455 ORTHO05D000434 6.7e-09 65.1 119 37.8
Dinv38769 Davidia involucrata HOM05D000455 ORTHO05D000434 1.1e-08 64.3 112 40.2
Cc06_g21920 Coffea canephora HOM05D000455 ORTHO05D011453 2.0e-08 63.5 71 52.1
Nitab4.5_0022090g0010 Nicotiana tabacum HOM05D000455 ORTHO05D000434 2.0e-08 63.5 114 38.6
CSS0027396 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.6e-08 63.2 121 37.2
CSS0047654 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.6e-08 63.2 121 37.2
Dinv38202 Davidia involucrata HOM05D000455 ORTHO05D000434 2.6e-08 63.2 114 38.6
Dinv10486 Davidia involucrata HOM05D000455 ORTHO05D000434 3.3e-08 62.8 119 36.1
Nitab4.5_0022180g0010 Nicotiana tabacum HOM05D000455 ORTHO05D000434 3.3e-08 62.8 114 38.6
Rhsim02G0248000 Rhododendron simsii HOM05D000455 ORTHO05D000434 3.3e-08 62.8 124 34.7
CSS0021735 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 5.7e-08 62.0 112 40.2
Cc06_g21900 Coffea canephora HOM05D000455 ORTHO05D011453 5.7e-08 62.0 53 60.4
CSS0048530 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 7.4e-08 61.6 127 36.2
Haze_09108 Corylus avellana HOM05D000455 ORTHO05D000434 7.4e-08 61.6 116 35.3
DCAR_030926 Daucus carota HOM05D000455 ORTHO05D000434 7.4e-08 61.6 84 45.2
DCAR_030927 Daucus carota HOM05D000455 ORTHO05D000434 9.7e-08 61.2 109 39.4
Lj8C207T2 Lonicera japonica HOM05D000455 ORTHO05D000434 1.3e-07 60.8 111 39.6
Nitab4.5_0007956g0050 Nicotiana tabacum HOM05D000455 ORTHO05D000434 1.7e-07 60.5 91 38.5
CSS0039323 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.2e-07 60.1 111 39.6
CSS0040866 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.2e-07 60.1 81 43.2
CiPaw.11G116600 Carya illinoinensis HOM05D000455 ORTHO05D000434 3.7e-07 59.3 125 36.8
CSS0032249 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 4.8e-07 58.9 111 38.7
CSS0000650 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 6.3e-07 58.5 111 36.9
CSS0009880 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 6.3e-07 58.5 111 36.0
Cc06_g22010 Coffea canephora HOM05D000455 ORTHO05D011453 6.3e-07 58.5 51 58.8
Dinv24844 Davidia involucrata HOM05D000455 ORTHO05D000434 6.3e-07 58.5 111 38.7
Nitab4.5_0007956g0010 Nicotiana tabacum HOM05D000455 ORTHO05D000434 6.3e-07 58.5 85 40.0
Nitab4.5_0003250g0070 Nicotiana tabacum HOM05D000060 ORTHO05D000434 1.1e-06 57.8 103 35.0
CSS0025654 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.8e-06 57.0 119 33.6
CSS0041013 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.8e-06 57.0 119 35.3
Cfa011968 Carpinus fangiana HOM05D000455 ORTHO05D000434 2.4e-06 56.6 121 36.4
CSS0044646 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 4.1e-06 55.8 111 36.0
Haze_09110 Corylus avellana HOM05D000455 ORTHO05D000434 4.1e-06 55.8 122 34.4
CSS0023928 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 5.3e-06 55.5 121 34.7
vmacro11534 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 5.3e-06 55.5 120 39.2
vmacro22559 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 5.3e-06 55.5 120 39.2
CSS0048685 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 7.0e-06 55.1 121 33.9
Hma1.2p1_1095F.1_g256570 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 7.0e-06 55.1 99 36.4
Rhsim02G0247800 Rhododendron simsii HOM05D000455 ORTHO05D000434 7.0e-06 55.1 128 32.0
CSS0013811 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 9.1e-06 54.7 119 33.6


User provided reference genes

Program Settings