Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g23200 Coffea canephora HOM05D033307 ORTHO05D153004 4.7e-77 291.2 154 100.0
Cc00_g23180 Coffea canephora HOM05D033307 ORTHO05D154423 3.3e-46 188.7 122 82.0
Cc03_g07130 Coffea canephora HOM05D033307 ORTHO05D153205 7.3e-38 161.0 94 89.4
Cc03_g07140 Coffea canephora HOM05D001162 ORTHO05D001218 7.8e-24 114.4 148 37.8
HanXRQChr09g0276461 Helianthus annuus HOM05D001162 ORTHO05D001218 1.2e-11 73.9 113 37.2
HanXRQChr02g0031681 Helianthus annuus HOM05D001162 ORTHO05D001218 6.4e-10 68.2 131 34.4
DCAR_026383 Daucus carota HOM05D001162 ORTHO05D001218 1.9e-09 66.6 119 35.3
Lsat_1_v5_gn_1_36080 Lactuca sativa HOM05D001162 ORTHO05D001218 1.9e-09 66.6 128 34.4
Lsat_1_v5_gn_4_95121 Lactuca sativa HOM05D001162 ORTHO05D001218 3.2e-09 65.9 129 33.3
Gohir.A05G135700 Gossypium hirsutum HOM05D001162 ORTHO05D001218 1.6e-08 63.5 112 38.4
Manes.11G026500 Manihot esculenta HOM05D001162 ORTHO05D001218 1.6e-08 63.5 112 35.7
ECA232G3404 Erigeron canadensis HOM05D001162 ORTHO05D001218 2.7e-08 62.8 128 32.8
Gohir.D05G137700 Gossypium hirsutum HOM05D001162 ORTHO05D001218 2.7e-08 62.8 91 42.9
Gorai.009G142100 Gossypium raimondii HOM05D001162 ORTHO05D001218 2.7e-08 62.8 91 42.9
Hma1.2p1_0388F.1_g142340 Hydrangea macrophylla HOM05D001162 ORTHO05D001218 2.7e-08 62.8 112 33.9
ECA247G3617 Erigeron canadensis HOM05D001162 ORTHO05D001218 4.6e-08 62.0 128 32.8
Dinv30379 Davidia involucrata HOM05D001162 ORTHO05D001218 1.3e-07 60.5 112 33.9
Lj5C45T5 Lonicera japonica HOM05D001162 ORTHO05D001218 1.3e-07 60.5 113 35.4
Nitab4.5_0001295g0120 Nicotiana tabacum HOM05D001162 ORTHO05D001218 1.3e-07 60.5 112 33.9
Peaxi162Scf00177g00311 Petunia axillaris HOM05D001162 ORTHO05D001218 1.3e-07 60.5 120 35.0
ECA236G4546 Erigeron canadensis HOM05D001162 ORTHO05D001218 1.8e-07 60.1 141 30.5
HanXRQChr05g0140151 Helianthus annuus HOM05D001162 ORTHO05D001218 2.3e-07 59.7 112 31.2
Manes.04G139600 Manihot esculenta HOM05D001162 ORTHO05D001218 2.3e-07 59.7 112 35.7
Peaxi162Scf00207g01050 Petunia axillaris HOM05D001162 ORTHO05D001218 2.3e-07 59.7 113 31.9
HanXRQChr04g0110621 Helianthus annuus HOM05D001162 ORTHO05D001218 3.0e-07 59.3 113 34.5
CAN.G1389.20 Capsicum annuum HOM05D001162 ORTHO05D001218 3.9e-07 58.9 112 33.0
Duzib160G0505 Durio zibethinus HOM05D001162 ORTHO05D001218 3.9e-07 58.9 112 34.8
Gohir.A10G046200 Gossypium hirsutum HOM05D001162 ORTHO05D001218 3.9e-07 58.9 129 33.3
Lsat_1_v5_gn_8_90180 Lactuca sativa HOM05D001162 ORTHO05D001218 3.9e-07 58.9 128 35.2
Nitab4.5_0000549g0060 Nicotiana tabacum HOM05D001162 ORTHO05D001218 6.7e-07 58.2 113 35.4
Ah.08g216210 Amaranthus hybridus HOM05D001162 ORTHO05D001218 8.7e-07 57.8 114 30.7
Hund18719 Selenicereus undatus HOM05D001162 ORTHO05D001218 8.7e-07 57.8 112 33.9
Thecc.06G113500 Theobroma cacao HOM05D001162 ORTHO05D001218 8.7e-07 57.8 112 34.8
Actinidia32146 Actinidia chinensis HOM05D001162 ORTHO05D001218 1.1e-06 57.4 91 37.4
Nitab4.5_0000189g0340 Nicotiana tabacum HOM05D001162 ORTHO05D001218 1.1e-06 57.4 113 34.5
Eucgr.J02860 Eucalyptus grandis HOM05D001162 ORTHO05D001218 1.5e-06 57.0 112 34.8
Peaxi162Scf00038g01521 Petunia axillaris HOM05D001162 ORTHO05D001218 1.5e-06 57.0 118 33.9
CANSAT56G3796 Cannabis sativa HOM05D001162 ORTHO05D001218 1.9e-06 56.6 113 31.0
Dinv37914 Davidia involucrata HOM05D001162 ORTHO05D001218 1.9e-06 56.6 105 32.4
Duzib192G0337 Durio zibethinus HOM05D001162 ORTHO05D001218 1.9e-06 56.6 112 34.8
Migut.D00969 Erythranthe guttata HOM05D001162 ORTHO05D001218 1.9e-06 56.6 112 32.1
Gohir.A09G080300 Gossypium hirsutum HOM05D001162 ORTHO05D001218 1.9e-06 56.6 112 34.8
Gohir.D10G047501 Gossypium hirsutum HOM05D001162 ORTHO05D001218 1.9e-06 56.6 129 33.3
Gorai.011G050600 Gossypium raimondii HOM05D001162 ORTHO05D001218 1.9e-06 56.6 129 33.3
Potri.001G201000 Populus trichocarpa HOM05D001162 ORTHO05D001218 1.9e-06 56.6 112 33.0
Potri.003G038900 Populus trichocarpa HOM05D001162 ORTHO05D001218 1.9e-06 56.6 111 36.0
RcHm_v2.0_Chr2g0143201 Rosa chinensis HOM05D001162 ORTHO05D001218 1.9e-06 56.6 113 31.9
Hund20855 Selenicereus undatus HOM05D001162 ORTHO05D001218 1.9e-06 56.6 112 31.2
Cc04_g01950 Coffea canephora HOM05D001162 ORTHO05D001218 2.5e-06 56.2 114 33.3
EL10Ac4g09085 Beta vulgaris HOM05D001162 ORTHO05D001218 3.3e-06 55.8 112 31.2
CSS0049028 Camellia sinensis var. sinensis HOM05D001162 ORTHO05D001218 3.3e-06 55.8 91 35.2
Gohir.D09G080300 Gossypium hirsutum HOM05D001162 ORTHO05D001218 3.3e-06 55.8 112 34.8
Lsat_1_v5_gn_9_12681 Lactuca sativa HOM05D001162 ORTHO05D001218 3.3e-06 55.8 114 33.3
TPR.G14552 Trifolium pratense HOM05D001162 ORTHO05D001218 3.3e-06 55.8 125 29.6
Gohir.A02G114900 Gossypium hirsutum HOM05D001162 ORTHO05D001218 4.3e-06 55.5 112 34.8
Oeu039958.1 Olea europaea HOM05D001162 ORTHO05D001218 4.3e-06 55.5 105 34.3
Zm00001eb160200 Zea mays HOM05D001162 ORTHO05D001218 4.3e-06 55.5 111 29.7
Glyma.13G350400 Glycine max HOM05D001162 ORTHO05D001218 5.6e-06 55.1 143 31.5
Rhsim08G0233300 Rhododendron simsii HOM05D001162 ORTHO05D001218 5.6e-06 55.1 112 33.0
Sabra01G0157000 Salix brachista HOM05D001162 ORTHO05D001218 5.6e-06 55.1 113 33.6
unitig_62.g23756 Utricularia gibba HOM05D001162 ORTHO05D001218 5.6e-06 55.1 115 31.3
Zm00001eb135700 Zea mays HOM05D001162 ORTHO05D001218 5.6e-06 55.1 128 31.2
DCAR_022707 Daucus carota HOM05D001162 ORTHO05D001218 7.4e-06 54.7 114 32.5
MSTRG.4768 Avicennia marina HOM05D001162 ORTHO05D001218 9.6e-06 54.3 113 32.7
Duzib235G0695 Durio zibethinus HOM05D001162 ORTHO05D001218 9.6e-06 54.3 112 34.8
Sabra03G0024800 Salix brachista HOM05D001162 ORTHO05D001218 9.6e-06 54.3 111 33.3
Sopen03g040400 Solanum pennellii HOM05D001162 ORTHO05D001218 9.6e-06 54.3 112 31.2


User provided reference genes

Program Settings