Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g23180 Coffea canephora HOM05D033307 ORTHO05D154423 2.9e-109 398.7 213 100.0
Cc00_g23200 Coffea canephora HOM05D033307 ORTHO05D153004 8.5e-45 184.5 122 82.0
Cc03_g07130 Coffea canephora HOM05D033307 ORTHO05D153205 1.3e-29 134.0 101 74.3
Cc03_g07140 Coffea canephora HOM05D001162 ORTHO05D001218 1.2e-17 94.4 122 37.7
ECA247G3617 Erigeron canadensis HOM05D001162 ORTHO05D001218 5.8e-09 65.5 136 35.3
HanXRQChr09g0276461 Helianthus annuus HOM05D001162 ORTHO05D001218 7.5e-09 65.1 164 31.7
Lsat_1_v5_gn_4_95121 Lactuca sativa HOM05D001162 ORTHO05D001218 9.8e-09 64.7 140 31.4
HanXRQChr02g0031681 Helianthus annuus HOM05D001162 ORTHO05D001218 2.2e-08 63.5 115 36.5
ECA232G3404 Erigeron canadensis HOM05D001162 ORTHO05D001218 2.9e-08 63.2 94 38.3
Lsat_1_v5_gn_1_36080 Lactuca sativa HOM05D001162 ORTHO05D001218 6.4e-08 62.0 97 38.1
DCAR_026383 Daucus carota HOM05D001162 ORTHO05D001218 8.3e-08 61.6 123 37.4
Gohir.A05G135700 Gossypium hirsutum HOM05D001162 ORTHO05D001218 1.1e-07 61.2 133 36.1
Manes.04G139600 Manihot esculenta HOM05D001162 ORTHO05D001218 1.1e-07 61.2 127 36.2
Peaxi162Scf00177g00311 Petunia axillaris HOM05D001162 ORTHO05D001218 1.1e-07 61.2 123 36.6
Potri.003G038900 Populus trichocarpa HOM05D001162 ORTHO05D001218 1.1e-07 61.2 127 36.2
Gohir.D05G137700 Gossypium hirsutum HOM05D001162 ORTHO05D001218 1.9e-07 60.5 132 37.1
Gorai.009G142100 Gossypium raimondii HOM05D001162 ORTHO05D001218 1.9e-07 60.5 132 37.1
Hma1.2p1_0388F.1_g142340 Hydrangea macrophylla HOM05D001162 ORTHO05D001218 1.9e-07 60.5 115 34.8
Dinv30379 Davidia involucrata HOM05D001162 ORTHO05D001218 2.4e-07 60.1 117 35.9
Lj6g0019107 Lotus japonicus HOM05D001162 ORTHO05D001218 2.4e-07 60.1 117 34.2
Manes.11G026500 Manihot esculenta HOM05D001162 ORTHO05D001218 2.4e-07 60.1 126 34.1
Nitab4.5_0000549g0060 Nicotiana tabacum HOM05D001162 ORTHO05D001218 2.4e-07 60.1 116 36.2
Oeu039958.1 Olea europaea HOM05D001162 ORTHO05D001218 2.4e-07 60.1 111 37.8
Cc04_g01950 Coffea canephora HOM05D001162 ORTHO05D001218 3.2e-07 59.7 95 38.9
Peaxi162Scf00038g01521 Petunia axillaris HOM05D001162 ORTHO05D001218 4.1e-07 59.3 94 38.3
Sabra03G0024800 Salix brachista HOM05D001162 ORTHO05D001218 4.1e-07 59.3 112 36.6
Glyma.15G024100 Glycine max HOM05D001162 ORTHO05D001218 5.4e-07 58.9 119 35.3
Gohir.D10G047501 Gossypium hirsutum HOM05D001162 ORTHO05D001218 5.4e-07 58.9 134 32.8
Gorai.011G050600 Gossypium raimondii HOM05D001162 ORTHO05D001218 5.4e-07 58.9 134 32.8
CANSAT56G3796 Cannabis sativa HOM05D001162 ORTHO05D001218 7.1e-07 58.5 129 31.0
Migut.D00969 Erythranthe guttata HOM05D001162 ORTHO05D001218 7.1e-07 58.5 116 33.6
Lj5C45T5 Lonicera japonica HOM05D001162 ORTHO05D001218 7.1e-07 58.5 117 35.0
Zm00001eb160200 Zea mays HOM05D001162 ORTHO05D001218 7.1e-07 58.5 129 33.3
Ca_00796_v3 Cicer arietinum L. HOM05D001162 ORTHO05D001218 9.2e-07 58.2 94 39.4
Duzib160G0505 Durio zibethinus HOM05D001162 ORTHO05D001218 9.2e-07 58.2 94 38.3
Gohir.D09G080300 Gossypium hirsutum HOM05D001162 ORTHO05D001218 9.2e-07 58.2 95 38.9
Oeu026749.1 Olea europaea HOM05D001162 ORTHO05D001218 9.2e-07 58.2 95 35.8
QL05p063033 Quercus lobata HOM05D001162 ORTHO05D001218 9.2e-07 58.2 152 29.6
CSS0049028 Camellia sinensis var. sinensis HOM05D001162 ORTHO05D001218 2.1e-06 57.0 94 35.1
CAN.G1389.20 Capsicum annuum HOM05D001162 ORTHO05D001218 2.1e-06 57.0 116 33.6
HanXRQChr04g0110621 Helianthus annuus HOM05D001162 ORTHO05D001218 2.1e-06 57.0 113 35.4
Peaxi162Scf00207g01050 Petunia axillaris HOM05D001162 ORTHO05D001218 2.1e-06 57.0 116 32.8
THA.LOC104822639 Tarenaya hassleriana HOM05D001162 ORTHO05D001218 2.1e-06 57.0 117 31.6
MSTRG.9497 Avicennia marina HOM05D001162 ORTHO05D001218 2.7e-06 56.6 119 34.5
TWI79G1175 Tripterygium wilfordii HOM05D001162 ORTHO05D001218 2.7e-06 56.6 137 33.6
GSVIVG01016855001 Vitis vinifera HOM05D001162 ORTHO05D001218 2.7e-06 56.6 119 34.5
CSS0046354 Camellia sinensis var. sinensis HOM05D001162 ORTHO05D001218 3.5e-06 56.2 127 32.3
Lsat_1_v5_gn_8_90180 Lactuca sativa HOM05D001162 ORTHO05D001218 3.5e-06 56.2 110 37.3
PSO210G5214 Papaver somniferum HOM05D001162 ORTHO05D001218 3.5e-06 56.2 117 32.5
Potri.001G201000 Populus trichocarpa HOM05D001162 ORTHO05D001218 3.5e-06 56.2 134 32.8
Dinv37914 Davidia involucrata HOM05D001162 ORTHO05D001218 4.6e-06 55.8 108 33.3
FAN02G3396 Fragaria x ananassa HOM05D001162 ORTHO05D001218 4.6e-06 55.8 162 29.6
Lj3g0018514 Lotus japonicus HOM05D001162 ORTHO05D001218 4.6e-06 55.8 131 32.1
PSO210G6805 Papaver somniferum HOM05D001162 ORTHO05D001218 4.6e-06 55.8 117 32.5
Thecc.06G113500 Theobroma cacao HOM05D001162 ORTHO05D001218 4.6e-06 55.8 129 34.1
Glyma.13G350400 Glycine max HOM05D001162 ORTHO05D001218 6.0e-06 55.5 118 33.1
HanXRQChr05g0140151 Helianthus annuus HOM05D001162 ORTHO05D001218 6.0e-06 55.5 148 29.7
Nitab4.5_0001295g0120 Nicotiana tabacum HOM05D001162 ORTHO05D001218 6.0e-06 55.5 117 31.6
Gohir.A02G114900 Gossypium hirsutum HOM05D001162 ORTHO05D001218 7.8e-06 55.1 130 33.8
Lj9A519T84 Lonicera japonica HOM05D001162 ORTHO05D001218 7.8e-06 55.1 116 33.6


User provided reference genes

Program Settings