Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 1.9e-26 121.7 59 100.0
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 9.0e-21 102.8 57 86.0
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 4.5e-20 100.5 57 82.5
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 4.5e-20 100.5 57 82.5
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 1.0e-19 99.4 57 80.7
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 1.0e-19 99.4 57 80.7
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 2.9e-19 97.8 57 80.7
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 3.8e-19 97.4 57 78.9
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 8.5e-19 96.3 57 78.9
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 1.4e-18 95.5 57 75.4
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 3.2e-18 94.4 57 77.2
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 3.2e-18 94.4 57 78.9
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 3.2e-18 94.4 57 77.2
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 4.2e-18 94.0 57 77.2
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 4.2e-18 94.0 57 77.2
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 4.2e-18 94.0 57 77.2
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 4.2e-18 94.0 57 77.2
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 5.5e-18 93.6 57 77.2
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 5.5e-18 93.6 57 73.7
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 5.5e-18 93.6 57 77.2
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 9.4e-18 92.8 57 75.4
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 9.4e-18 92.8 57 73.7
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 9.4e-18 92.8 57 73.7
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 1.2e-17 92.4 57 77.2
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 1.2e-17 92.4 57 75.4
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 1.2e-17 92.4 57 73.7
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 1.6e-17 92.0 57 71.9
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 1.6e-17 92.0 57 75.4
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 1.6e-17 92.0 57 75.4
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 1.6e-17 92.0 57 73.7
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 2.1e-17 91.7 57 73.7
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 2.1e-17 91.7 57 73.7
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 2.1e-17 91.7 57 75.4
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 2.7e-17 91.3 57 75.4
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 2.7e-17 91.3 57 73.7
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 2.7e-17 91.3 57 73.7
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 2.7e-17 91.3 57 75.4
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.7e-17 91.3 57 75.4
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 2.7e-17 91.3 57 75.4
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 2.7e-17 91.3 57 73.7
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 3.6e-17 90.9 57 75.4
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 4.6e-17 90.5 57 73.7
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 4.6e-17 90.5 57 73.7
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 4.6e-17 90.5 57 73.7
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 4.6e-17 90.5 57 73.7
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 6.1e-17 90.1 57 71.9
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 7.9e-17 89.7 57 73.7
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 7.9e-17 89.7 57 73.7
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 7.9e-17 89.7 57 75.4
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 7.9e-17 89.7 57 70.2
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 7.9e-17 89.7 57 71.9
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 7.9e-17 89.7 57 73.7
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 7.9e-17 89.7 57 71.9
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 1.0e-16 89.4 57 70.2
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 1.4e-16 89.0 57 75.4
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 1.8e-16 88.6 57 68.4
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 1.8e-16 88.6 57 73.7
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.8e-16 88.6 57 73.7
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.8e-16 88.6 57 73.7
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.8e-16 88.6 57 73.7
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.8e-16 88.6 57 73.7
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 2.3e-16 88.2 57 71.9
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 2.3e-16 88.2 57 73.7
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 3.9e-16 87.4 57 71.9
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 3.9e-16 87.4 57 71.9
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 3.9e-16 87.4 57 68.4
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 5.1e-16 87.0 57 71.9
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 5.1e-16 87.0 57 70.2
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 5.1e-16 87.0 57 71.9
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 6.7e-16 86.7 57 75.4
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 8.8e-16 86.3 57 70.2
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 1.5e-15 85.5 57 68.4
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 1.9e-15 85.1 57 70.2
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 2.5e-15 84.7 50 78.0
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 3.3e-15 84.3 57 66.7
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 3.3e-15 84.3 57 70.2
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 3.3e-15 84.3 57 70.2
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 3.3e-15 84.3 57 70.2
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 4.3e-15 84.0 57 68.4
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 5.7e-15 83.6 57 68.4
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 5.7e-15 83.6 57 66.7
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 7.4e-15 83.2 57 70.2
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 7.4e-15 83.2 57 68.4
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 9.7e-15 82.8 57 71.9
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 9.7e-15 82.8 57 66.7
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 1.3e-14 82.4 57 68.4
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.3e-14 82.4 57 68.4
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 1.7e-14 82.0 57 70.2
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 1.7e-14 82.0 57 68.4
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 2.8e-14 81.3 57 70.2
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 4.8e-14 80.5 57 64.9
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 1.1e-13 79.3 57 64.9
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 1.1e-13 79.3 50 72.0
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 5.3e-13 77.0 62 61.3
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 9.1e-13 76.3 64 64.1
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 9.1e-13 76.3 64 64.1
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 2.0e-12 75.1 64 62.5
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 2.0e-12 75.1 64 62.5
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 1.7e-11 72.0 57 56.1
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 3.8e-11 70.9 57 59.6
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 3.8e-11 70.9 59 59.3
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 7.2e-10 66.6 57 57.9
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.2e-09 65.9 41 73.2
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 3.6e-09 64.3 46 65.2


User provided reference genes

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