Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 9.7e-49 196.4 95 100.0
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 2.9e-21 105.1 91 59.3
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 1.9e-20 102.4 50 92.0
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 3.2e-20 101.7 55 78.2
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 7.2e-20 100.5 50 90.0
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 7.2e-20 100.5 59 76.3
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 7.2e-20 100.5 58 75.9
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 1.2e-19 99.8 88 53.4
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 2.7e-19 98.6 93 57.0
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 3.6e-19 98.2 84 63.1
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 4.7e-19 97.8 58 75.9
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 6.1e-19 97.4 52 80.8
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 6.1e-19 97.4 94 56.4
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 6.1e-19 97.4 84 61.9
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 8.0e-19 97.1 87 56.3
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 1.0e-18 96.7 79 64.6
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 1.4e-18 96.3 67 65.7
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 1.8e-18 95.9 52 80.8
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 1.8e-18 95.9 58 72.4
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 2.3e-18 95.5 52 80.8
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 3.0e-18 95.1 61 73.8
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 3.0e-18 95.1 88 54.5
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 3.0e-18 95.1 84 65.5
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 4.0e-18 94.7 94 53.2
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 1.5e-17 92.8 58 74.1
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 1.5e-17 92.8 51 80.4
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 1.5e-17 92.8 56 75.0
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 2.0e-17 92.4 59 76.3
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 2.0e-17 92.4 59 76.3
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 2.0e-17 92.4 51 80.4
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 2.0e-17 92.4 66 66.7
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 2.6e-17 92.0 50 78.0
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 2.6e-17 92.0 50 78.0
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 2.6e-17 92.0 59 67.8
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 3.4e-17 91.7 69 68.1
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 3.4e-17 91.7 67 68.7
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 4.4e-17 91.3 69 60.9
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 4.4e-17 91.3 48 85.4
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 4.4e-17 91.3 59 69.5
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 5.7e-17 90.9 59 71.2
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 9.8e-17 90.1 69 63.8
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 9.8e-17 90.1 47 83.0
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 9.8e-17 90.1 69 66.7
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 2.2e-16 89.0 47 80.9
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 2.2e-16 89.0 47 80.9
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 2.8e-16 88.6 50 74.0
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 4.8e-16 87.8 54 75.9
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 8.3e-16 87.0 47 78.7
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 8.3e-16 87.0 56 66.1
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 1.4e-15 86.3 47 78.7
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 1.4e-15 86.3 47 78.7
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 1.8e-15 85.9 47 78.7
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 1.8e-15 85.9 62 69.4
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 4.1e-15 84.7 47 78.7
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 4.1e-15 84.7 47 76.6
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 4.1e-15 84.7 58 69.0
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 7.7e-14 80.5 63 61.9
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 7.7e-14 80.5 62 61.3
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 7.7e-14 80.5 51 72.5
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 1.3e-13 79.7 60 63.3
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 1.3e-13 79.7 48 72.9
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 2.3e-13 79.0 64 57.8
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 2.3e-13 79.0 60 61.7
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 3.8e-13 78.2 54 64.8
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 3.8e-13 78.2 54 64.8
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 3.8e-13 78.2 60 58.3
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 5.0e-13 77.8 44 72.7
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 1.5e-12 76.3 86 50.0
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 2.5e-12 75.5 52 69.2
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 1.6e-11 72.8 51 68.6
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 5.2e-10 67.8 46 65.2
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 5.2e-10 67.8 36 72.2
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 6.8e-10 67.4 36 72.2
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 1.5e-09 66.2 64 51.6
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 7.5e-09 63.9 34 76.5
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 7.5e-09 63.9 32 78.1
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 7.0e-07 57.4 90 43.3


User provided reference genes

Program Settings