Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 4.3e-172 607.8 296 100.0
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 6.0e-105 384.8 299 69.6
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 6.0e-105 384.8 299 69.2
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 6.0e-105 384.8 299 68.9
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 6.6e-104 381.3 299 68.6
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 4.3e-103 378.6 296 68.2
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 5.6e-103 378.3 302 68.2
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 1.2e-102 377.1 297 69.7
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 8.1e-102 374.4 294 66.3
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 1.4e-101 373.6 293 68.6
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.8e-101 373.2 296 69.6
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 3.4e-100 369.0 294 67.7
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 7.6e-100 367.9 300 69.0
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 2.9e-99 365.9 292 66.1
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.1e-98 364.0 297 68.4
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.4e-98 363.6 298 65.8
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 2.4e-98 362.8 306 67.3
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 3.2e-98 362.5 306 67.3
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 9.2e-98 360.9 313 66.8
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 1.6e-97 360.1 296 66.9
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 2.7e-97 359.4 295 65.1
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 2.3e-96 356.3 296 63.2
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 2.3e-96 356.3 296 63.9
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 2.3e-96 356.3 313 62.3
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 3.0e-96 355.9 295 64.4
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 3.0e-96 355.9 294 63.6
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 3.9e-96 355.5 299 65.2
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 3.9e-96 355.5 292 65.8
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 8.6e-96 354.4 292 65.1
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 1.1e-95 354.0 296 64.5
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 2.5e-95 352.8 333 60.7
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 7.3e-95 351.3 293 63.1
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 1.6e-94 350.1 293 63.1
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 3.6e-94 349.0 364 56.0
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 1.1e-93 347.4 298 64.1
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 1.4e-93 347.1 293 63.1
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 1.4e-93 347.1 297 62.6
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 1.4e-93 347.1 291 65.3
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 3.1e-93 345.9 295 64.1
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 5.2e-93 345.1 240 72.1
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 1.2e-92 344.0 287 63.4
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 1.2e-92 344.0 326 60.4
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 2.0e-92 343.2 295 60.3
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 3.4e-92 342.4 292 61.6
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 5.8e-92 341.7 293 63.1
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 7.6e-92 341.3 299 63.2
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 9.9e-92 340.9 281 64.4
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 1.3e-91 340.5 282 64.2
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 1.3e-91 340.5 282 64.2
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.3e-91 340.5 296 60.5
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 1.7e-91 340.1 282 64.2
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 6.4e-91 338.2 294 62.9
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 6.4e-91 338.2 299 62.2
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 2.4e-90 336.3 298 61.1
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 2.4e-90 336.3 297 62.6
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 5.4e-90 335.1 295 62.4
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 5.4e-90 335.1 300 63.3
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 7.1e-90 334.7 294 62.9
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 9.3e-90 334.3 340 57.4
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 2.1e-89 333.2 298 60.4
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 2.7e-89 332.8 299 61.5
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 2.3e-88 329.7 290 61.7
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.3e-88 329.7 295 58.6
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 5.1e-88 328.6 306 62.4
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 3.3e-87 325.9 290 60.0
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 5.6e-87 325.1 231 72.3
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 2.8e-86 322.8 270 64.4
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 2.8e-86 322.8 297 59.9
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 6.2e-86 321.6 296 60.8
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 1.4e-85 320.5 261 65.5
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 1.8e-85 320.1 274 62.4
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 3.1e-85 319.3 291 59.1
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 5.3e-85 318.5 275 61.1
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 1.5e-84 317.0 206 74.8
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 1.1e-82 310.8 225 69.3
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 7.1e-82 308.1 298 58.7
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 7.1e-82 308.1 264 62.5
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 2.1e-81 306.6 296 60.8
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 1.0e-80 304.3 297 59.9
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 8.7e-80 301.2 297 58.6
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 2.4e-77 293.1 300 57.0
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 9.9e-76 287.7 196 75.5
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 5.5e-74 282.0 215 67.0
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 7.1e-74 281.6 187 73.8
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 2.1e-73 280.0 338 51.5
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.3e-72 277.3 255 58.0
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 6.7e-72 275.0 276 54.7
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 8.7e-72 274.6 206 68.9
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 8.7e-72 274.6 281 56.9
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 8.7e-72 274.6 185 75.1
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 8.7e-72 274.6 257 56.0
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 1.1e-71 274.2 189 73.0
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 9.6e-71 271.2 178 75.3
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 5.3e-69 265.4 193 69.4
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 4.5e-68 262.3 282 50.0
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 1.9e-63 246.9 230 52.6
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 2.5e-63 246.5 276 46.0
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 2.4e-61 240.0 193 62.7
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 1.9e-58 230.3 313 47.6
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 3.6e-57 226.1 128 80.5
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 1.8e-53 213.8 181 51.9
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 4.1e-53 212.6 244 47.1
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 1.0e-51 208.0 212 48.6
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 5.5e-50 202.2 180 53.9
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 7.7e-44 181.8 138 69.6
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 1.3e-43 181.0 186 54.8
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.3e-38 164.5 252 36.1
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 6.3e-38 162.2 212 49.1
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.7e-27 127.5 237 38.4
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 9.4e-26 121.7 109 61.5
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 4.4e-23 112.8 56 91.1
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 5.0e-19 99.4 95 52.6
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 6.5e-19 99.0 86 59.3
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 2.1e-17 94.0 58 74.1
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 1.4e-16 91.3 63 69.8
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 4.0e-16 89.7 104 57.7
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 1.3e-14 84.7 93 58.1
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.8e-13 80.9 81 58.0
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 5.4e-13 79.3 91 46.2
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 2.3e-11 73.9 87 43.7


User provided reference genes

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