Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g21520 Coffea canephora HOM05D000100 ORTHO05D012212 1.3e-16 88.6 45 100.0
Cc05_g02320 Coffea canephora HOM05D000100 ORTHO05D000052 5.1e-16 86.7 45 97.8
Cc05_g02350 Coffea canephora HOM05D000100 ORTHO05D000052 1.1e-15 85.5 45 95.6
Cc00_g21500 Coffea canephora HOM05D000100 ORTHO05D000052 2.5e-10 67.8 45 73.3
Cc01_g02990 Coffea canephora HOM05D000100 ORTHO05D000052 1.8e-08 61.6 44 65.9
Solyc12g014010.2 Solanum lycopersicum HOM05D000100 ORTHO05D000052 2.3e-08 61.2 45 62.2
Cc06_g22480 Coffea canephora HOM05D000100 ORTHO05D000052 3.9e-08 60.5 43 72.1
Nitab4.5_0006169g0010 Nicotiana tabacum HOM05D000100 ORTHO05D000052 5.1e-08 60.1 42 69.0
Sopen07g022720 Solanum pennellii HOM05D000100 ORTHO05D000052 1.5e-07 58.5 41 68.3
CAN.G964.11 Capsicum annuum HOM05D000100 ORTHO05D012212 5.7e-07 56.6 42 61.9
Ciclev10011522m.g Citrus clementina HOM05D000100 ORTHO05D000052 5.7e-07 56.6 43 62.8
Lj1P1042T77 Lonicera japonica HOM05D000100 ORTHO05D000052 9.7e-07 55.8 40 62.5
Nitab4.5_0011395g0010 Nicotiana tabacum HOM05D000100 ORTHO05D000052 9.7e-07 55.8 40 65.0
Sopen12g005760 Solanum pennellii HOM05D000100 ORTHO05D000052 9.7e-07 55.8 45 57.8
Peaxi162Scf00393g00076 Petunia axillaris HOM05D000100 ORTHO05D000052 1.3e-06 55.5 40 60.0
Cc06_g22490 Coffea canephora HOM05D000100 ORTHO05D000052 1.6e-06 55.1 42 69.0
Eucgr.A00935 Eucalyptus grandis HOM05D000100 ORTHO05D000052 2.2e-06 54.7 45 60.0
Nitab4.5_0000170g0370 Nicotiana tabacum HOM05D000100 ORTHO05D000052 2.2e-06 54.7 40 62.5
CSS0010308 Camellia sinensis var. sinensis HOM05D000100 ORTHO05D000052 2.8e-06 54.3 42 61.9
PGSC0003DMG400015327 Solanum tuberosum HOM05D000100 ORTHO05D000052 2.8e-06 54.3 42 57.1
PGSC0003DMG400034632 Solanum tuberosum HOM05D000100 ORTHO05D000052 2.8e-06 54.3 41 65.9
COL.COLO4_19979 Corchorus olitorius HOM05D000100 ORTHO05D012212 3.7e-06 53.9 45 55.6
Peaxi162Scf00393g00718 Petunia axillaris HOM05D000100 ORTHO05D000052 3.7e-06 53.9 42 61.9
Peaxi162Scf00393g00075 Petunia axillaris HOM05D000100 ORTHO05D000052 4.8e-06 53.5 43 58.1
Solyc07g043170.4 Solanum lycopersicum HOM05D000100 ORTHO05D000052 4.8e-06 53.5 41 63.4
CANSAT64G0805 Cannabis sativa HOM05D000100 ORTHO05D000052 8.2e-06 52.8 45 55.6
Nitab4.5_0002570g0020 Nicotiana tabacum HOM05D000100 ORTHO05D000052 8.2e-06 52.8 42 57.1
Nitab4.5_0010991g0030 Nicotiana tabacum HOM05D000100 ORTHO05D000052 8.2e-06 52.8 40 60.0
Peaxi162Scf00789g00015 Petunia axillaris HOM05D000100 ORTHO05D000052 8.2e-06 52.8 42 57.1
Solyc07g043160.1 Solanum lycopersicum HOM05D000100 ORTHO05D000052 8.2e-06 52.8 40 60.0
Sopen07g022710 Solanum pennellii HOM05D000100 ORTHO05D000052 8.2e-06 52.8 40 60.0
TAR622G0995 Trochodendron aralioides HOM05D000100 ORTHO05D000052 8.2e-06 52.8 41 63.4


User provided reference genes

Program Settings