Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 1.1e-127 459.9 221 100.0
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 3.9e-85 318.5 222 70.7
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 6.7e-85 317.8 205 74.6
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 8.2e-83 310.8 221 71.5
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 1.4e-82 310.1 222 70.3
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 2.4e-82 309.3 226 67.3
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 2.4e-82 309.3 226 67.3
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 3.1e-82 308.9 224 70.5
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 7.7e-81 304.3 220 68.6
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 2.9e-80 302.4 220 65.5
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 2.1e-78 296.2 169 81.1
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 2.7e-78 295.8 196 74.5
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 3.6e-78 295.4 224 68.3
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 7.9e-78 294.3 214 66.4
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 1.0e-77 293.9 172 79.7
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 1.0e-77 293.9 196 74.0
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 2.3e-77 292.7 228 66.7
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 3.9e-77 292.0 167 79.6
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 3.9e-77 292.0 184 73.4
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 1.1e-76 290.4 168 76.2
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 1.1e-76 290.4 192 72.9
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 1.1e-76 290.4 225 64.0
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 2.0e-76 289.7 191 71.7
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 2.6e-76 289.3 225 63.6
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 4.3e-76 288.5 215 66.5
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 5.7e-76 288.1 163 81.0
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 7.4e-76 287.7 225 63.6
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 9.7e-76 287.3 172 80.8
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 1.3e-75 287.0 227 64.8
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 1.3e-75 287.0 230 62.6
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 6.3e-75 284.6 224 64.7
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 2.0e-73 279.6 175 76.6
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 3.4e-73 278.9 227 63.0
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 7.7e-73 277.7 224 64.3
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 1.7e-72 276.6 197 69.0
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 2.9e-72 275.8 249 59.4
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 3.8e-72 275.4 219 61.2
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 3.8e-72 275.4 182 73.6
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 5.0e-72 275.0 185 70.3
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 5.0e-72 275.0 176 75.0
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 5.0e-72 275.0 176 75.0
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 6.5e-72 274.6 219 61.2
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 2.5e-71 272.7 204 64.2
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 3.2e-71 272.3 226 61.5
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.2e-70 270.4 176 73.3
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 2.1e-70 269.6 163 76.1
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 2.1e-70 269.6 181 69.6
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 6.1e-70 268.1 220 61.8
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 6.1e-70 268.1 163 73.0
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 7.9e-70 267.7 205 63.9
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 1.4e-69 266.9 165 74.5
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 3.0e-69 265.8 226 56.6
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 3.9e-69 265.4 164 75.0
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 5.2e-69 265.0 180 68.3
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 6.7e-69 264.6 164 74.4
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 8.8e-69 264.2 179 69.8
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 8.8e-69 264.2 164 75.0
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 1.1e-68 263.8 164 74.4
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 1.1e-68 263.8 164 74.4
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 1.1e-68 263.8 164 74.4
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 1.1e-68 263.8 164 74.4
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 1.5e-68 263.5 172 73.3
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 2.0e-68 263.1 201 63.2
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 4.4e-68 261.9 193 65.8
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 4.4e-68 261.9 167 72.5
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 4.4e-68 261.9 187 66.3
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 4.4e-68 261.9 166 71.7
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 8.2e-67 257.7 221 60.2
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 2.4e-66 256.1 166 71.7
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 5.3e-66 255.0 203 63.1
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 7.0e-66 254.6 164 72.6
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 9.1e-66 254.2 164 72.6
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 4.5e-65 251.9 164 71.3
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 6.5e-64 248.1 216 57.4
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 1.2e-62 243.8 180 61.7
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 1.0e-61 240.7 160 70.6
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 2.3e-61 239.6 166 67.5
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 2.3e-61 239.6 160 69.4
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 5.2e-61 238.4 139 76.3
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 4.4e-60 235.3 170 65.9
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 7.5e-60 234.6 166 66.3
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 9.7e-60 234.2 218 56.9
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 9.7e-60 234.2 225 58.2
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 1.7e-59 233.4 173 67.1
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 5.0e-56 221.9 164 60.4
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.1e-55 220.7 276 45.7
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 1.4e-53 213.8 124 75.8
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 2.9e-48 196.1 105 83.8
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 1.9e-47 193.4 119 79.8
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 4.2e-47 192.2 105 82.9
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 8.3e-43 177.9 109 74.3
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 2.4e-42 176.4 164 56.1
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 1.6e-38 163.7 160 50.6
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 6.4e-35 151.8 216 46.8
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 2.6e-28 129.8 89 66.3
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 7.0e-26 121.7 77 74.0
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 7.0e-26 121.7 94 57.4
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 1.0e-24 117.9 117 50.4
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 1.6e-22 110.5 119 47.9
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 2.0e-20 103.6 173 37.0
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 4.6e-17 92.4 67 64.2
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 3.0e-16 89.7 131 40.5
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 4.7e-14 82.4 41 85.4
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 8.1e-14 81.6 138 39.9


User provided reference genes

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