Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g20250 Coffea canephora HOM05D007157 ORTHO05D009045 4.5e-126 455.3 368 100.0
Lj5A824G14 Lonicera japonica HOM05D007157 ORTHO05D009045 3.9e-61 239.6 363 67.5
MSTRG.23478 Avicennia marina HOM05D007157 ORTHO05D009045 6.6e-61 238.8 363 71.3
Oeu048928.2 Olea europaea HOM05D007157 ORTHO05D009045 2.5e-60 236.9 364 70.3
PGSC0003DMG400020245 Solanum tuberosum HOM05D007157 ORTHO05D009045 1.8e-58 230.7 364 67.3
Haze_14901 Corylus avellana HOM05D007157 ORTHO05D009045 2.3e-58 230.3 363 68.9
Solyc02g094310.3 Solanum lycopersicum HOM05D007157 ORTHO05D009045 1.2e-57 228.0 364 64.8
Sopen02g038950 Solanum pennellii HOM05D007157 ORTHO05D009045 1.2e-57 228.0 364 66.2
ECA246G1262 Erigeron canadensis HOM05D000482 ORTHO05D000349 2.0e-57 227.3 367 67.3
CAN.G473.124 Capsicum annuum HOM05D007157 ORTHO05D009045 5.8e-57 225.7 367 66.5
Peaxi162Scf00420g00637 Petunia axillaris HOM05D007157 ORTHO05D009045 3.7e-56 223.0 367 64.3
Cfa007204 Carpinus fangiana HOM05D007157 ORTHO05D009045 2.4e-55 220.3 363 67.8
MD09G1008000 Malus domestica HOM05D007157 ORTHO05D009045 9.2e-55 218.4 362 58.3
SalBow3G1100 Salvia bowleyana HOM05D007157 ORTHO05D009045 2.1e-54 217.2 347 70.3
SalBow3G1401 Salvia bowleyana HOM05D007157 ORTHO05D009045 7.8e-54 215.3 347 70.3
Sc03g0006270 Simmondsia chinensis HOM05D007157 ORTHO05D009045 1.0e-53 214.9 364 65.1
Prupe.3G308900 Prunus persica HOM05D007157 ORTHO05D009045 1.7e-53 214.2 362 63.5
RcHm_v2.0_Chr2g0175991 Rosa chinensis HOM05D007157 ORTHO05D009045 1.5e-52 211.1 359 61.3
DCAR_021804 Daucus carota HOM05D007157 ORTHO05D009045 3.3e-52 209.9 361 62.0
Potri.001G326800 Populus trichocarpa HOM05D007157 ORTHO05D009045 9.5e-52 208.4 363 64.2
FvH4_6g53850 Fragaria vesca HOM05D007157 ORTHO05D009045 8.1e-51 205.3 359 60.7
FAN14G2967 Fragaria x ananassa HOM05D007157 ORTHO05D009045 8.1e-51 205.3 359 60.7
Nitab4.5_0000519g0020 Nicotiana tabacum HOM05D007157 ORTHO05D009045 2.3e-50 203.8 367 64.9
Atru.chr6.2599 Acer truncatum HOM05D007157 ORTHO05D009045 4.0e-50 203.0 363 66.9
FAN05G0711 Fragaria x ananassa HOM05D007157 ORTHO05D009045 4.0e-50 203.0 359 60.4
Dinv25644 Davidia involucrata HOM05D007157 ORTHO05D009045 6.8e-50 202.2 363 66.4
Thecc.04G040600 Theobroma cacao HOM05D007157 ORTHO05D009045 8.9e-50 201.8 361 66.2
Sabra16G0209300 Salix brachista HOM05D007157 ORTHO05D009045 1.2e-49 201.4 363 66.1
Rhsim10G0004500 Rhododendron simsii HOM05D007157 ORTHO05D009045 1.5e-49 201.1 363 64.5
vmacro05975 Vaccinium macrocarpon HOM05D007157 ORTHO05D009045 2.6e-49 200.3 363 65.3
Nitab4.5_0005858g0130 Nicotiana tabacum HOM05D000485 ORTHO05D009045 7.5e-49 198.7 368 37.0
ClCG11G009400 Citrullus lanatus HOM05D007157 ORTHO05D009045 2.2e-48 197.2 362 65.5
Hma1.2p1_0812F.1_g222250 Hydrangea macrophylla HOM05D007157 ORTHO05D009045 2.2e-48 197.2 136 70.6
Glyma.16G053700 Glycine max HOM05D007157 ORTHO05D009045 1.1e-47 194.9 363 65.3
CANSAT64G2603 Cannabis sativa HOM05D007157 ORTHO05D009045 1.4e-47 194.5 363 65.0
FAN09G1568 Fragaria x ananassa HOM05D007157 ORTHO05D009045 2.4e-47 193.7 347 61.4
Migut.H00838 Erythranthe guttata HOM05D007157 ORTHO05D009045 9.2e-47 191.8 339 67.6
Lalb_Chr00c01g0403821 Lupinus albus HOM05D007157 ORTHO05D009045 2.7e-46 190.3 363 63.4
VMungo1383G0567 Vigna mungo HOM05D007157 ORTHO05D009045 6.6e-45 185.7 362 64.1
CiPaw.03G058300 Carya illinoinensis HOM05D007157 ORTHO05D009045 2.5e-44 183.7 137 62.0
COL.COLO4_13293 Corchorus olitorius HOM05D000485 ORTHO05D009045 7.3e-44 182.2 135 63.0
CSS0034431 Camellia sinensis var. sinensis HOM05D007157 ORTHO05D009045 1.6e-43 181.0 135 64.4
Duzib147G0388 Durio zibethinus HOM05D007157 ORTHO05D009045 8.1e-43 178.7 135 64.4
Manes.04G088300 Manihot esculenta HOM05D007157 ORTHO05D009045 8.1e-43 178.7 136 60.3
TAR375G0551 Trochodendron aralioides HOM05D007157 ORTHO05D009045 8.1e-43 178.7 136 62.5
Ciclev10014547m.g Citrus clementina HOM05D007157 ORTHO05D009045 1.8e-42 177.6 363 56.7
Actinidia36218 Actinidia chinensis HOM05D007157 ORTHO05D009045 8.9e-42 175.3 136 64.0
Sed0017582 Sechium edule HOM05D007157 ORTHO05D009045 8.9e-42 175.3 368 62.2
Cpa.g.c35912 Carica papaya HOM05D007157 ORTHO05D009045 1.2e-41 174.9 135 60.7
TAR629G1749 Trochodendron aralioides HOM05D007157 ORTHO05D009045 1.2e-41 174.9 135 62.2
Lsat_1_v5_gn_0_3360 Lactuca sativa HOM05D007157 ORTHO05D009045 4.4e-41 172.9 366 62.8
TWI34G0589 Tripterygium wilfordii HOM05D007157 ORTHO05D009045 2.2e-40 170.6 136 60.3
TWI34G1752 Tripterygium wilfordii HOM05D007157 ORTHO05D009045 2.2e-40 170.6 136 60.3
EL10Ac6g15443 Beta vulgaris HOM05D007157 ORTHO05D009045 2.9e-40 170.2 363 61.4
MELO3C008172.2 Cucumis melo HOM05D007157 ORTHO05D009045 3.8e-40 169.9 135 58.5
Lj5A791T21 Lonicera japonica HOM05D007157 ORTHO05D009045 3.8e-40 169.9 330 63.9
Eucgr.H03351 Eucalyptus grandis HOM05D007157 ORTHO05D009045 4.9e-40 169.5 136 58.8
Gohir.D04G075000 Gossypium hirsutum HOM05D007157 ORTHO05D009045 8.4e-40 168.7 134 61.2
AUR62003414 Chenopodium quinoa HOM05D000173 ORTHO05D006747 1.1e-39 168.3 367 58.0
Aqoxy5G03262 Aquilegia oxysepala HOM05D007157 ORTHO05D009045 3.2e-39 166.8 134 56.0
CsaV3_2G034000 Cucumis sativus L. HOM05D007157 ORTHO05D009045 3.2e-39 166.8 135 57.8
Gorai.012G084300 Gossypium raimondii HOM05D007157 ORTHO05D009045 4.2e-39 166.4 134 60.4
arahy.Tifrunner.gnm1.ann1.VP4GDR Arachis hypogaea HOM05D007157 ORTHO05D009045 7.1e-39 165.6 363 60.1
AUR62029427 Chenopodium quinoa HOM05D007157 ORTHO05D009045 6.0e-38 162.5 134 57.5
HanXRQChr17g0551661 Helianthus annuus HOM05D007157 ORTHO05D009045 6.0e-38 162.5 118 65.3
FAN02G1074 Fragaria x ananassa HOM05D007157 ORTHO05D009045 7.8e-38 162.2 363 51.0
Psat3g167400 Pisum sativum HOM05D007157 ORTHO05D009045 7.8e-38 162.2 362 62.2
PSO017G3067 Papaver somniferum HOM05D007157 ORTHO05D009045 1.3e-37 161.4 134 55.2
arahy.Tifrunner.gnm1.ann1.LR7EIQ Arachis hypogaea HOM05D007157 ORTHO05D009045 1.7e-37 161.0 363 59.2
Gohir.A05G336500 Gossypium hirsutum HOM05D007157 ORTHO05D009045 2.3e-37 160.6 134 59.0
GSVIVG01033052001 Vitis vinifera HOM05D007157 ORTHO05D009045 2.3e-37 160.6 118 63.6
PGR083G0651 Punica granatum HOM05D007157 ORTHO05D009045 5.1e-37 159.5 135 53.3
TPR.G8553 Trifolium pratense HOM05D007157 ORTHO05D009045 1.1e-36 158.3 362 61.6
Glyma.19G095500 Glycine max HOM05D007157 ORTHO05D009045 1.5e-36 157.9 362 42.3
Phvul.001G089400 Phaseolus vulgaris HOM05D007157 ORTHO05D009045 1.5e-36 157.9 133 54.9
QL02p070811 Quercus lobata HOM05D007157 ORTHO05D009045 4.3e-36 156.4 114 63.2
Lj1g0010660 Lotus japonicus HOM05D007157 ORTHO05D009045 7.3e-36 155.6 137 54.7
AL6G24740 Arabidopsis lyrata HOM05D007157 ORTHO05D009045 2.1e-35 154.1 136 54.4
BolC9t59142H Brassica oleracea HOM05D007157 ORTHO05D009045 2.8e-35 153.7 137 55.5
Thhalv10012953m.g Eutrema salsugineum HOM05D007157 ORTHO05D009045 3.6e-35 153.3 137 55.5
Sp6g29920 Schrenkiella parvula HOM05D007157 ORTHO05D009045 4.7e-35 152.9 137 55.5
C09p63050 Brassica napus HOM05D007157 ORTHO05D009045 1.4e-34 151.4 137 54.7
Medtr7g027940 Medicago truncatula HOM05D007157 ORTHO05D009045 1.8e-34 151.0 362 61.3
BraA10t44501Z Brassica rapa HOM05D007157 ORTHO05D009045 3.1e-34 150.2 137 54.0
Aa31LG11G14870 Aethionema arabicum HOM05D007157 ORTHO05D009045 4.0e-34 149.8 136 54.4
SHI04033 Sapria himalayana HOM05D007157 ORTHO05D009045 4.0e-34 149.8 346 30.1
THA.LOC104802372 Tarenaya hassleriana HOM05D007157 ORTHO05D009045 5.3e-34 149.4 135 54.1
A10p24350 Brassica napus HOM05D007157 ORTHO05D009045 1.2e-33 148.3 137 53.3
Carub.0006s1227 Capsella rubella HOM05D007157 ORTHO05D009045 2.9e-32 143.7 128 55.5
AT5G14080 Arabidopsis thaliana HOM05D007157 ORTHO05D009045 4.9e-32 142.9 128 54.7
SGA_v2.0_scaffold211G42168 Striga asiatica HOM05D007157 ORTHO05D009045 3.2e-31 140.2 112 61.6
ATR0012G053 Amborella trichopoda HOM05D007157 ORTHO05D009045 9.3e-31 138.7 129 49.6
CARHR199280 Cardamine hirsuta HOM05D007157 ORTHO05D009045 9.3e-31 138.7 122 54.9
CDE01G0454 Ceratophyllum demersum HOM05D007157 ORTHO05D009045 1.6e-30 137.9 364 56.3
Ah.03g148180 Amaranthus hybridus HOM05D007157 ORTHO05D009045 4.6e-30 136.3 120 55.0
Ca_12649_v3 Cicer arietinum L. HOM05D007157 ORTHO05D009045 1.5e-28 131.3 362 51.9
Lj8P534T4 Lonicera japonica HOM05D007157 ORTHO05D009045 2.4e-26 124.0 86 66.3
TPR.G29476 Trifolium pratense HOM05D007157 ORTHO05D009045 2.4e-26 124.0 376 51.3
BcaC02g07725 Brassica carinata HOM05D007157 ORTHO05D009045 5.8e-25 119.4 137 48.2
Zm00001eb093300 Zea mays HOM05D007157 ORTHO05D009045 1.3e-24 118.2 136 40.4
HPP92_009778 Vanilla planifolia HOM05D007157 ORTHO05D009045 1.7e-24 117.9 136 40.4
Actinidia05886 Actinidia chinensis HOM05D007157 ORTHO05D009045 2.3e-21 107.5 87 62.1
TPR.G29386 Trifolium pratense HOM05D007157 ORTHO05D009045 4.9e-16 89.7 96 41.7
BolC4t27904H Brassica oleracea HOM05D007157 ORTHO05D009045 2.5e-15 87.4 137 38.7
TAR375G0854 Trochodendron aralioides HOM05D007157 ORTHO05D009045 2.8e-11 73.9 93 41.9
Hund04273 Selenicereus undatus HOM05D007157 ORTHO05D009045 6.9e-10 69.3 115 32.2
Nn5g29238 Nelumbo nucifera HOM05D007157 ORTHO05D009045 5.5e-07 59.7 47 57.4


User provided reference genes

Program Settings