Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 2.2e-114 415.6 205 100.0
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 1.0e-34 151.0 100 73.0
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 1.0e-34 151.0 100 73.0
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 1.0e-34 151.0 100 73.0
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 8.5e-34 147.9 100 72.0
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 1.1e-33 147.5 100 74.0
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.5e-33 147.1 100 73.0
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.9e-33 146.7 100 73.0
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 3.2e-33 146.0 100 72.0
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 4.2e-33 145.6 100 75.0
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 2.1e-32 143.3 101 73.3
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 5.2e-31 138.7 100 69.0
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 5.2e-31 138.7 100 72.0
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 2.0e-30 136.7 103 69.9
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 2.6e-30 136.3 100 72.0
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 2.6e-30 136.3 102 69.6
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 4.4e-30 135.6 102 71.6
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 5.7e-30 135.2 99 70.7
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 7.5e-30 134.8 90 74.4
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 9.7e-30 134.4 115 64.3
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 9.7e-30 134.4 140 54.3
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 1.3e-29 134.0 102 68.6
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.3e-29 134.0 105 66.7
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 1.7e-29 133.7 111 62.2
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 4.8e-29 132.1 102 64.7
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 6.3e-29 131.7 101 68.3
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 1.1e-28 131.0 101 66.3
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 1.4e-28 130.6 99 69.7
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 1.8e-28 130.2 98 68.4
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 3.1e-28 129.4 100 69.0
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 3.1e-28 129.4 99 64.6
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 3.1e-28 129.4 96 67.7
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 3.1e-28 129.4 103 68.9
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 5.3e-28 128.6 101 67.3
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 7.0e-28 128.3 102 63.7
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 9.1e-28 127.9 101 66.3
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 9.1e-28 127.9 101 66.3
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 9.1e-28 127.9 101 66.3
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 2.7e-27 126.3 101 67.3
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 4.5e-27 125.6 101 69.3
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 5.9e-27 125.2 87 72.4
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 5.9e-27 125.2 98 64.3
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 5.9e-27 125.2 102 63.7
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 5.9e-27 125.2 102 63.7
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 1.7e-26 123.6 99 63.6
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 2.2e-26 123.2 101 62.4
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 6.5e-26 121.7 98 64.3
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 1.5e-25 120.6 99 63.6
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 1.5e-25 120.6 98 63.3
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 1.5e-25 120.6 98 66.3
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 1.9e-25 120.2 101 64.4
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 1.9e-25 120.2 103 62.1
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.9e-25 120.2 103 62.1
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.9e-25 120.2 103 62.1
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 2.5e-25 119.8 99 61.6
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 2.5e-25 119.8 100 61.0
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 3.2e-25 119.4 99 63.6
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 4.2e-25 119.0 98 63.3
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.2e-24 117.5 96 66.7
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 2.7e-24 116.3 99 61.6
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 2.7e-24 116.3 98 63.3
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 8.0e-24 114.8 96 62.5
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 8.0e-24 114.8 102 64.7
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 8.0e-24 114.8 96 68.8
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 1.0e-23 114.4 104 59.6
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 1.4e-23 114.0 104 59.6
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 1.4e-23 114.0 101 60.4
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 2.3e-23 113.2 94 61.7
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 2.3e-23 113.2 100 61.0
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 2.3e-23 113.2 103 60.2
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 3.0e-23 112.8 104 58.7
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 4.0e-23 112.5 105 61.0
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 5.2e-23 112.1 105 61.0
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 6.8e-23 111.7 102 64.7
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 8.8e-23 111.3 103 60.2
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 2.0e-22 110.2 102 59.8
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 2.6e-22 109.8 104 61.5
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 2.6e-22 109.8 97 61.9
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 4.4e-22 109.0 123 49.6
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 4.4e-22 109.0 99 58.6
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 4.4e-22 109.0 105 57.1
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 9.8e-22 107.8 94 59.6
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 4.8e-21 105.5 101 61.4
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 8.3e-21 104.8 103 58.3
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 8.3e-21 104.8 101 58.4
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 8.3e-21 104.8 103 58.3
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 1.4e-20 104.0 94 58.5
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 3.1e-20 102.8 103 57.3
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 5.9e-19 98.6 103 55.3
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 1.0e-18 97.8 99 55.6
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 2.3e-18 96.7 111 53.2
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 8.6e-18 94.7 114 50.0
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.8e-15 87.0 83 54.2
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 1.7e-13 80.5 90 53.3
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 2.8e-13 79.7 89 52.8
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 7.0e-12 75.1 63 63.5
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 1.7e-10 70.5 75 54.7
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 2.3e-10 70.1 93 45.2
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 9.5e-09 64.7 105 44.8
Mapoly0047s0010 Marchantia polymorpha HOM05D026638 ORTHO05D030127 5.7e-06 55.5 110 35.5
SEGI_24301 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 9.8e-06 54.7 105 34.3


User provided reference genes

Program Settings