Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g18010 Coffea canephora HOM05D000089 ORTHO05D014275 7.8e-21 102.8 51 100.0
Cc00_g04690 Coffea canephora HOM05D000089 ORTHO05D014275 6.2e-18 93.2 51 94.1
Cc00_g32890 Coffea canephora HOM05D000089 ORTHO05D014275 6.2e-18 93.2 51 94.1
Cc03_g03640 Coffea canephora HOM05D000089 ORTHO05D014275 6.2e-18 93.2 51 94.1
Cc03_g13460 Coffea canephora HOM05D000089 ORTHO05D014275 6.2e-18 93.2 51 94.1
Cc02_g26450 Coffea canephora HOM05D000089 ORTHO05D014275 8.9e-17 89.4 51 90.2
Cc02_g34720 Coffea canephora HOM05D000089 ORTHO05D014275 4.4e-16 87.0 51 88.2
Cc02_g36730 Coffea canephora HOM05D000089 ORTHO05D000726 7.8e-13 76.3 43 90.7
Lj1g0023874 Lotus japonicus HOM05D000089 ORTHO05D000726 2.6e-08 61.2 37 81.1
ECA236G3465 Erigeron canadensis HOM05D000089 ORTHO05D000726 4.4e-08 60.5 39 76.9
Cc02_g23910 Coffea canephora HOM05D000089 ORTHO05D000726 5.8e-08 60.1 42 71.4
GSVIVG01027600001 Vitis vinifera HOM05D000089 ORTHO05D000726 5.8e-08 60.1 45 71.1
Ca_07810_v3 Cicer arietinum L. HOM05D000089 ORTHO05D000726 2.9e-07 57.8 38 71.1
Medtr7g074865 Medicago truncatula HOM05D000089 ORTHO05D014275 4.9e-07 57.0 43 67.4
Psat3g116440 Pisum sativum HOM05D000089 ORTHO05D000726 4.9e-07 57.0 37 73.0
arahy.Tifrunner.gnm1.ann1.A91P3Y Arachis hypogaea HOM05D000089 ORTHO05D000726 8.4e-07 56.2 38 68.4
Glyma.09G269600 Glycine max HOM05D000089 ORTHO05D000726 8.4e-07 56.2 37 73.0
Glyma.18G220500 Glycine max HOM05D000089 ORTHO05D000726 8.4e-07 56.2 37 73.0
Lsat_1_v5_gn_7_7060 Lactuca sativa HOM05D000089 ORTHO05D000726 8.4e-07 56.2 40 72.5
Lsat_1_v5_gn_7_7100 Lactuca sativa HOM05D000089 ORTHO05D000726 8.4e-07 56.2 40 72.5
HanXRQChr04g0122431 Helianthus annuus HOM05D000089 ORTHO05D000726 1.1e-06 55.8 36 75.0
Lj1g0016722 Lotus japonicus HOM05D000089 ORTHO05D000726 1.1e-06 55.8 38 68.4
VMungo1383G1975 Vigna mungo HOM05D000089 ORTHO05D000726 1.1e-06 55.8 37 73.0
MSTRG.17186 Avicennia marina HOM05D000089 ORTHO05D000726 1.4e-06 55.5 42 69.0
Hma1.2p1_0033F.1_g021190 Hydrangea macrophylla HOM05D000089 ORTHO05D000726 1.4e-06 55.5 41 70.7
Medtr7g074730 Medicago truncatula HOM05D000089 ORTHO05D000726 1.4e-06 55.5 37 67.6
Medtr7g074820 Medicago truncatula HOM05D000089 ORTHO05D000726 1.4e-06 55.5 37 67.6
arahy.Tifrunner.gnm1.ann1.QWC2CC Arachis hypogaea HOM05D000089 ORTHO05D000726 1.9e-06 55.1 42 69.0
MSTRG.17187 Avicennia marina HOM05D000089 ORTHO05D000726 1.9e-06 55.1 34 76.5
Oeu011933.4 Olea europaea HOM05D000089 ORTHO05D000726 1.9e-06 55.1 42 69.0
Phvul.011G212800 Phaseolus vulgaris HOM05D000089 ORTHO05D000726 1.9e-06 55.1 42 64.3
Glyma.09G269400 Glycine max HOM05D000089 ORTHO05D000726 2.4e-06 54.7 38 68.4
arahy.Tifrunner.gnm1.ann1.49QGSQ Arachis hypogaea HOM05D000089 ORTHO05D000726 4.2e-06 53.9 34 76.5
arahy.Tifrunner.gnm1.ann1.6LQ9DQ Arachis hypogaea HOM05D000089 ORTHO05D000726 4.2e-06 53.9 34 76.5
CsaV3_6G006200 Cucumis sativus L. HOM05D000089 ORTHO05D000726 4.2e-06 53.9 41 61.0
Medtr7g074850 Medicago truncatula HOM05D000089 ORTHO05D000726 4.2e-06 53.9 37 64.9
MSTRG.17189 Avicennia marina HOM05D000089 ORTHO05D000726 5.4e-06 53.5 36 72.2
Ca_07809_v3 Cicer arietinum L. HOM05D000089 ORTHO05D000726 5.4e-06 53.5 34 73.5
Medtr7g074880 Medicago truncatula HOM05D000089 ORTHO05D000726 5.4e-06 53.5 33 75.8
Psat3g116280 Pisum sativum HOM05D000089 ORTHO05D000726 5.4e-06 53.5 38 63.2
SalBow6G1411 Salvia bowleyana HOM05D000089 ORTHO05D000726 5.4e-06 53.5 40 72.5
arahy.Tifrunner.gnm1.ann1.B0KX4P Arachis hypogaea HOM05D000089 ORTHO05D000726 7.1e-06 53.1 35 68.6
arahy.Tifrunner.gnm1.ann1.R2V6SE Arachis hypogaea HOM05D000089 ORTHO05D000726 7.1e-06 53.1 35 68.6
HanXRQChr04g0122591 Helianthus annuus HOM05D000089 ORTHO05D000726 7.1e-06 53.1 40 67.5
Potri.002G147400 Populus trichocarpa HOM05D000089 ORTHO05D000726 7.1e-06 53.1 35 71.4
GSVIVG01027601001 Vitis vinifera HOM05D000089 ORTHO05D000726 7.1e-06 53.1 41 68.3
GSVIVG01027603001 Vitis vinifera HOM05D000089 ORTHO05D000726 7.1e-06 53.1 41 68.3
Potri.002G147601 Populus trichocarpa HOM05D000089 ORTHO05D000726 9.3e-06 52.8 40 67.5
Potri.002G147701 Populus trichocarpa HOM05D000089 ORTHO05D000726 9.3e-06 52.8 40 67.5
SGA_v2.0_scaffold153G37006 Striga asiatica HOM05D000089 ORTHO05D000726 9.3e-06 52.8 36 69.4


User provided reference genes

Program Settings