Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g18000 Coffea canephora HOM05D001568 ORTHO05D009161 8.4e-87 323.6 153 100.0
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 2.6e-64 248.8 147 77.6
Nitab4.5_0001458g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 3.5e-64 248.4 142 81.7
Nitab4.5_0011705g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 5.9e-64 247.7 146 79.5
Potri.009G085700 Populus trichocarpa HOM05D001568 ORTHO05D009161 1.3e-63 246.5 145 77.2
CAN.G1427.5 Capsicum annuum HOM05D001568 ORTHO05D009161 2.2e-63 245.7 149 76.5
Peaxi162Scf00003g02812 Petunia axillaris HOM05D001568 ORTHO05D009161 5.0e-63 244.6 145 78.6
Sabra09G0065800 Salix brachista HOM05D001568 ORTHO05D009161 6.5e-63 244.2 145 76.6
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 6.5e-63 244.2 152 75.0
RcHm_v2.0_Chr6g0248511 Rosa chinensis HOM05D001568 ORTHO05D009161 8.5e-63 243.8 150 76.0
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 1.9e-62 242.7 142 80.3
MD10G1109900 Malus domestica HOM05D001568 ORTHO05D009161 1.2e-61 240.0 144 75.7
FvH4_2g03350 Fragaria vesca HOM05D001568 ORTHO05D009161 1.6e-61 239.6 143 76.9
FvH4_2g03390 Fragaria vesca HOM05D001568 ORTHO05D009161 1.6e-61 239.6 143 77.6
Rhsim05G0092800 Rhododendron simsii HOM05D001568 ORTHO05D009161 2.7e-61 238.8 147 75.5
QL11p029372 Quercus lobata HOM05D001568 ORTHO05D009161 3.6e-61 238.4 147 77.6
CANSAT25G2862 Cannabis sativa HOM05D001568 ORTHO05D009161 6.1e-61 237.7 162 69.8
FAN15G0831 Fragaria x ananassa HOM05D001568 ORTHO05D009161 8.0e-61 237.3 143 76.2
Cfa004703 Carpinus fangiana HOM05D001568 ORTHO05D009161 1.4e-60 236.5 145 77.2
FAN27G2772 Fragaria x ananassa HOM05D001568 ORTHO05D009161 1.8e-60 236.1 143 76.2
CiPaw.06G164200 Carya illinoinensis HOM05D001568 ORTHO05D009161 2.3e-60 235.7 147 74.8
Atru.chr5.2303 Acer truncatum HOM05D001568 ORTHO05D009161 5.2e-60 234.6 146 74.0
FAN24G0656 Fragaria x ananassa HOM05D001568 ORTHO05D009161 5.2e-60 234.6 143 75.5
Gorai.013G051500 Gossypium raimondii HOM05D001568 ORTHO05D009161 2.6e-59 232.3 146 74.7
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 7.5e-59 230.7 142 74.6
Gohir.D13G046000 Gossypium hirsutum HOM05D001568 ORTHO05D009161 7.5e-59 230.7 146 74.0
Thhalv10023010m.g Eutrema salsugineum HOM05D001568 ORTHO05D009161 9.7e-59 230.3 147 73.5
Manes.10G086600 Manihot esculenta HOM05D001568 ORTHO05D009161 1.3e-58 229.9 144 71.5
Solyc10g048190.1 Solanum lycopersicum HOM05D001568 ORTHO05D009161 1.3e-58 229.9 139 76.3
A07p05850 Brassica napus HOM05D001568 ORTHO05D009161 1.7e-58 229.6 146 73.3
Gohir.A13G047700 Gossypium hirsutum HOM05D001568 ORTHO05D009161 1.7e-58 229.6 146 73.3
Prupe.8G150000 Prunus persica HOM05D001568 ORTHO05D009161 1.7e-58 229.6 149 71.8
THA.LOC104804397 Tarenaya hassleriana HOM05D001568 ORTHO05D009161 1.7e-58 229.6 155 70.3
A07p05700 Brassica napus HOM05D001568 ORTHO05D009161 2.2e-58 229.2 146 73.3
BraA07t28378Z Brassica rapa HOM05D001568 ORTHO05D009161 2.2e-58 229.2 146 73.3
Sc01g0002530 Simmondsia chinensis HOM05D001568 ORTHO05D009161 2.8e-58 228.8 148 74.3
PGSC0003DMG400012841 Solanum tuberosum HOM05D001568 ORTHO05D009161 3.7e-58 228.4 143 74.1
Sed0014293 Sechium edule HOM05D001568 ORTHO05D009161 6.3e-58 227.6 143 74.8
CARHR286340 Cardamine hirsuta HOM05D001568 ORTHO05D009161 1.4e-57 226.5 148 71.6
Duzib132G0829 Durio zibethinus HOM05D001568 ORTHO05D009161 1.4e-57 226.5 145 71.0
PSO541G2903 Papaver somniferum HOM05D001568 ORTHO05D009161 1.8e-57 226.1 146 73.3
BcaC06g36001 Brassica carinata HOM05D001568 ORTHO05D009161 2.4e-57 225.7 146 71.9
C07p09120 Brassica napus HOM05D001568 ORTHO05D009161 2.4e-57 225.7 146 71.9
BolC7t41323H Brassica oleracea HOM05D001568 ORTHO05D009161 2.4e-57 225.7 146 71.9
Duzib248G0869 Durio zibethinus HOM05D001568 ORTHO05D009161 3.1e-57 225.3 145 71.7
AL3G46300 Arabidopsis lyrata HOM05D001568 ORTHO05D009161 4.1e-57 224.9 147 72.1
BraA07t28366Z Brassica rapa HOM05D001568 ORTHO05D009161 5.3e-57 224.6 147 72.8
Nn5g30651 Nelumbo nucifera HOM05D001568 ORTHO05D009161 7.0e-57 224.2 141 71.6
PSO675G4557 Papaver somniferum HOM05D001568 ORTHO05D009161 7.0e-57 224.2 151 70.2
Thecc.02G119600 Theobroma cacao HOM05D001568 ORTHO05D009161 1.2e-56 223.4 145 71.7
Sp3g27770 Schrenkiella parvula HOM05D001568 ORTHO05D009161 1.6e-56 223.0 146 72.6
PGR142G3835 Punica granatum HOM05D001568 ORTHO05D009161 2.7e-56 222.2 144 70.8
TAR625G0338 Trochodendron aralioides HOM05D001568 ORTHO05D009161 3.5e-56 221.9 144 74.3
MSTRG.20237 Avicennia marina HOM05D001568 ORTHO05D009161 4.5e-56 221.5 149 69.1
ClCG10G010070 Citrullus lanatus HOM05D001568 ORTHO05D009161 5.9e-56 221.1 142 72.5
AT2G14660 Arabidopsis thaliana HOM05D001568 ORTHO05D009161 7.7e-56 220.7 151 68.9
PSO541G3645 Papaver somniferum HOM05D001568 ORTHO05D009161 7.7e-56 220.7 147 67.3
Cpa.g.sc91.59 Carica papaya HOM05D001568 ORTHO05D009161 1.0e-55 220.3 143 70.6
BcaB05g22586 Brassica carinata HOM05D001568 ORTHO05D009161 1.7e-55 219.5 143 73.4
Lsat_1_v5_gn_5_117140 Lactuca sativa HOM05D001568 ORTHO05D009161 2.2e-55 219.2 141 73.8
MELO3C018021.2 Cucumis melo HOM05D001568 ORTHO05D009161 2.9e-55 218.8 142 71.1
Actinidia27999 Actinidia chinensis HOM05D001568 ORTHO05D009161 3.8e-55 218.4 131 78.6
COL.COLO4_32488 Corchorus olitorius HOM05D001568 ORTHO05D009161 5.0e-55 218.0 151 66.9
TWI23G0417 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 5.0e-55 218.0 144 72.9
Carub.0003s2869 Capsella rubella HOM05D001568 ORTHO05D009161 8.5e-55 217.2 154 67.5
CsaV3_4G000110 Cucumis sativus L. HOM05D001568 ORTHO05D009161 1.5e-54 216.5 151 67.5
Migut.B00461 Erythranthe guttata HOM05D001568 ORTHO05D009161 5.5e-54 214.5 143 72.7
HanXRQChr10g0305111 Helianthus annuus HOM05D001568 ORTHO05D009161 5.5e-54 214.5 147 69.4
TWI59G0351 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 5.5e-54 214.5 144 71.5
unitig_0.g633 Utricularia gibba HOM05D001568 ORTHO05D009161 9.4e-54 213.8 138 71.7
Aqoxy5G00361 Aquilegia oxysepala HOM05D001568 ORTHO05D009161 1.2e-53 213.4 136 72.8
Medtr5g005350 Medicago truncatula HOM05D001568 ORTHO05D009161 3.6e-53 211.8 148 67.6
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 6.1e-53 211.1 144 68.1
SGA_v2.0_scaffold32G12987 Striga asiatica HOM05D001568 ORTHO05D009161 1.4e-52 209.9 140 71.4
Lj1g0027535 Lotus japonicus HOM05D001568 ORTHO05D009161 4.0e-52 208.4 141 71.6
Glyma.01G241600 Glycine max HOM05D001568 ORTHO05D009161 5.2e-52 208.0 141 71.6
Lalb_Chr20g0110071 Lupinus albus HOM05D001568 ORTHO05D009161 5.2e-52 208.0 151 65.6
MBI16_g39097_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 5.2e-52 208.0 137 68.6
CDE07G0917 Ceratophyllum demersum HOM05D001568 ORTHO05D009161 6.8e-52 207.6 139 68.3
TPR.G8318 Trifolium pratense HOM05D001568 ORTHO05D009161 6.8e-52 207.6 143 71.3
Ah.08g217180 Amaranthus hybridus HOM05D001035 ORTHO05D001045 2.6e-51 205.7 141 70.2
VMungo1215G1258 Vigna mungo HOM05D001568 ORTHO05D009161 2.8e-50 202.2 143 69.2
CSS0003584 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D009161 3.7e-50 201.8 146 67.8
EL10Ac1g00245 Beta vulgaris HOM05D001568 ORTHO05D009161 9.1e-49 197.2 142 69.0
Phvul.002G050900 Phaseolus vulgaris HOM05D001568 ORTHO05D009161 2.0e-48 196.1 136 70.6
SHI05019 Sapria himalayana HOM05D001568 ORTHO05D009161 4.0e-44 181.8 140 59.3
HPP92_015706 Vanilla planifolia HOM05D001568 ORTHO05D009161 4.9e-42 174.9 146 58.9
HPP92_026656 Vanilla planifolia HOM05D001568 ORTHO05D009161 4.9e-42 174.9 146 58.9
Os03g0676100 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 1.1e-41 173.7 157 55.4
ATR0739G196 Amborella trichopoda HOM05D001568 ORTHO05D009161 4.1e-41 171.8 134 58.2
MBI16_g27033_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 1.2e-40 170.2 137 60.6
Lj9P337T35 Lonicera japonica HOM05D001568 ORTHO05D009161 6.6e-39 164.5 107 70.1
Zm00001eb217400 Zea mays HOM05D001568 ORTHO05D009161 1.5e-38 163.3 148 56.1
SEGI_07672 Sequoiadendron giganteum HOM05D001568 ORTHO05D009161 3.3e-38 162.2 135 54.1
Medtr8g027785 Medicago truncatula HOM05D001568 ORTHO05D009161 1.8e-36 156.4 149 52.3
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis HOM05D001568 ORTHO05D009161 6.8e-36 154.5 133 56.4
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 1.2e-35 153.7 142 55.6
Sopen10g020220 Solanum pennellii HOM05D001568 ORTHO05D009161 2.9e-34 149.1 94 74.5
Mapoly0117s0004 Marchantia polymorpha HOM05D001568 ORTHO05D009161 3.7e-34 148.7 133 53.4
CBR_g38178 Chara braunii HOM05D001568 ORTHO05D009161 1.1e-33 147.1 134 52.2
Pp3c10_11040 Physcomitrium patens HOM05D001568 ORTHO05D009161 9.2e-33 144.1 133 53.4
AUR62004510 Chenopodium quinoa HOM05D001568 ORTHO05D009161 1.2e-32 143.7 97 72.2
AUR62023444 Chenopodium quinoa HOM05D001568 ORTHO05D009161 2.7e-32 142.5 97 71.1
Oeu037289.1 Olea europaea HOM05D001568 ORTHO05D009161 4.6e-32 141.7 142 53.5
Psat4g228720 Pisum sativum HOM05D001568 ORTHO05D009161 4.3e-30 135.2 104 60.6
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 4.1e-25 118.6 137 47.4
BcaB03g16261 Brassica carinata HOM05D001568 ORTHO05D009161 3.9e-23 112.1 112 50.9
MCO07G364 Micromonas commoda HOM05D001568 ORTHO05D009161 1.8e-20 103.2 158 39.2
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 3.1e-20 102.4 81 58.0
Os08g0485300 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 5.8e-19 98.2 103 48.5
MD05G1105400 Malus domestica HOM05D001568 ORTHO05D009161 1.9e-17 93.2 72 58.3
Cre12.g497650 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D009161 9.2e-17 90.9 157 36.9


User provided reference genes

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