Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g16630 Coffea canephora HOM05D004542 ORTHO05D005380 1.6e-73 279.3 136 100.0
Dinv07945 Davidia involucrata HOM05D004542 ORTHO05D005380 4.8e-41 171.4 132 63.6
MSTRG.2336 Avicennia marina HOM05D004542 ORTHO05D005380 8.1e-41 170.6 135 64.4
PGSC0003DMG400002854 Solanum tuberosum HOM05D004542 ORTHO05D005380 4.0e-40 168.3 136 65.4
Solyc04g005590.3 Solanum lycopersicum HOM05D004542 ORTHO05D005380 2.6e-39 165.6 136 65.4
Migut.L01259 Erythranthe guttata HOM05D004542 ORTHO05D005380 9.9e-39 163.7 136 61.0
Peaxi162Scf00023g02531 Petunia axillaris HOM05D004542 ORTHO05D005380 1.3e-38 163.3 114 68.4
CSS0014017 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 6.4e-38 161.0 139 59.7
CSS0031140 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 6.4e-38 161.0 139 59.7
Sopen04g001630 Solanum pennellii HOM05D004542 ORTHO05D005380 6.4e-38 161.0 130 65.4
Nitab4.5_0000391g0330 Nicotiana tabacum HOM05D004542 ORTHO05D005380 3.2e-37 158.7 114 69.3
Peaxi162Scf00222g00329 Petunia axillaris HOM05D004542 ORTHO05D005380 3.2e-37 158.7 134 60.4
Cfa004898 Carpinus fangiana HOM05D004542 ORTHO05D005380 1.6e-36 156.4 132 62.1
Potri.008G090100 Populus trichocarpa HOM05D004542 ORTHO05D005380 2.7e-36 155.6 139 58.3
SalBow1G8597 Salvia bowleyana HOM05D004542 ORTHO05D005380 3.5e-36 155.2 130 61.5
TWI09G1372 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 1.3e-35 153.3 135 62.2
Potri.010G165100 Populus trichocarpa HOM05D004542 ORTHO05D005380 1.8e-35 152.9 139 59.0
Nitab4.5_0013306g0010 Nicotiana tabacum HOM05D004542 ORTHO05D005380 3.0e-35 152.1 117 66.7
Oeu001710.1 Olea europaea HOM05D004542 ORTHO05D005380 6.7e-35 151.0 135 58.5
Thecc.02G341300 Theobroma cacao HOM05D004542 ORTHO05D005380 1.1e-34 150.2 139 59.7
Sopen05g007930 Solanum pennellii HOM05D004542 ORTHO05D005380 1.5e-34 149.8 116 65.5
Carub.0001s2428 Capsella rubella HOM05D004542 ORTHO05D005380 2.5e-34 149.1 138 59.4
AT1G26740 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 4.3e-34 148.3 137 59.9
CiPaw.06G087700 Carya illinoinensis HOM05D004542 ORTHO05D005380 4.3e-34 148.3 121 63.6
Solyc05g013190.4 Solanum lycopersicum HOM05D004542 ORTHO05D005380 7.4e-34 147.5 135 59.3
Cpa.g.sc69.70 Carica papaya HOM05D004542 ORTHO05D005380 1.3e-33 146.7 140 59.3
MD04G1010200 Malus domestica HOM05D004542 ORTHO05D005380 1.6e-33 146.4 136 60.3
TWI73G0467 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 2.8e-33 145.6 139 57.6
AL1G38970 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 4.8e-33 144.8 137 58.4
BraA07t29078Z Brassica rapa HOM05D004542 ORTHO05D005380 6.2e-33 144.4 142 57.0
Actinidia31969 Actinidia chinensis HOM05D004542 ORTHO05D005380 8.2e-33 144.1 138 58.0
Atru.chr11.1738 Acer truncatum HOM05D004542 ORTHO05D005380 1.1e-32 143.7 126 61.1
Actinidia17747 Actinidia chinensis HOM05D004542 ORTHO05D005380 1.1e-32 143.7 138 58.0
BcaC06g35127 Brassica carinata HOM05D004542 ORTHO05D005380 1.1e-32 143.7 140 57.9
QL05p050003 Quercus lobata HOM05D004542 ORTHO05D005380 1.1e-32 143.7 137 59.1
C07p19550 Brassica napus HOM05D004542 ORTHO05D005380 1.4e-32 143.3 140 57.1
BolC7t42472H Brassica oleracea HOM05D004542 ORTHO05D005380 1.4e-32 143.3 140 57.1
CANSAT21G2357 Cannabis sativa HOM05D004542 ORTHO05D005380 1.4e-32 143.3 138 59.4
Manes.01G033600 Manihot esculenta HOM05D004542 ORTHO05D005380 1.8e-32 142.9 141 56.7
SalBow1G7833 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.8e-32 142.9 130 58.5
BcaB03g14086 Brassica carinata HOM05D004542 ORTHO05D005380 2.4e-32 142.5 138 57.2
CARHR025220 Cardamine hirsuta HOM05D004542 ORTHO05D005380 2.4e-32 142.5 137 58.4
A07p13070 Brassica napus HOM05D004542 ORTHO05D005380 3.1e-32 142.1 142 56.3
RcHm_v2.0_Chr4g0415001 Rosa chinensis HOM05D004542 ORTHO05D005380 3.1e-32 142.1 135 55.6
Sabra08G0067500 Salix brachista HOM05D004542 ORTHO05D005380 3.1e-32 142.1 153 52.9
C05p24230 Brassica napus HOM05D004542 ORTHO05D005380 4.0e-32 141.7 140 55.0
Cpa.g.sc57.38 Carica papaya HOM05D004542 ORTHO05D005380 4.0e-32 141.7 118 62.7
Nn3g17306 Nelumbo nucifera HOM05D004542 ORTHO05D005380 5.3e-32 141.4 134 57.5
SalBow1G4390 Salvia bowleyana HOM05D004542 ORTHO05D005380 6.9e-32 141.0 130 57.7
BolC5t31159H Brassica oleracea HOM05D004542 ORTHO05D005380 9.0e-32 140.6 140 55.0
Prupe.1G009500 Prunus persica HOM05D004542 ORTHO05D005380 9.0e-32 140.6 136 56.6
Sc14g0007580 Simmondsia chinensis HOM05D004542 ORTHO05D005380 9.0e-32 140.6 126 61.9
TAR622G0172 Trochodendron aralioides HOM05D004542 ORTHO05D005380 9.0e-32 140.6 135 57.0
Gohir.A07G047800 Gossypium hirsutum HOM05D004542 ORTHO05D005380 1.5e-31 139.8 142 54.9
THA.LOC104822040 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 1.5e-31 139.8 139 57.6
Hma1.2p1_0357F.1_g134240 Hydrangea macrophylla HOM05D004542 ORTHO05D005380 2.6e-31 139.0 95 68.4
AL2G28600 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 3.4e-31 138.7 140 55.7
Ciclev10033055m.g Citrus clementina HOM05D004542 ORTHO05D005380 4.5e-31 138.3 130 60.8
Aa31LG7G8390 Aethionema arabicum HOM05D004542 ORTHO05D005380 5.8e-31 137.9 138 56.5
Duzib248G0510 Durio zibethinus HOM05D004542 ORTHO05D005380 5.8e-31 137.9 139 57.6
Gohir.D07G052100 Gossypium hirsutum HOM05D004542 ORTHO05D005380 7.6e-31 137.5 142 54.9
Nn3g18387 Nelumbo nucifera HOM05D004542 ORTHO05D005380 7.6e-31 137.5 135 56.3
Sp5g24560 Schrenkiella parvula HOM05D004542 ORTHO05D005380 7.6e-31 137.5 138 58.0
BraA09t39513Z Brassica rapa HOM05D004542 ORTHO05D005380 1.0e-30 137.1 140 53.6
ECA233G6069 Erigeron canadensis HOM05D004542 ORTHO05D005380 1.0e-30 137.1 133 56.4
BcaC05g26392 Brassica carinata HOM05D004542 ORTHO05D005380 1.3e-30 136.7 140 54.3
ClCG05G024060 Citrullus lanatus HOM05D004542 ORTHO05D005380 1.3e-30 136.7 141 53.9
Thhalv10009076m.g Eutrema salsugineum HOM05D004542 ORTHO05D005380 1.3e-30 136.7 138 55.8
Gorai.001G055100 Gossypium raimondii HOM05D004542 ORTHO05D005380 1.3e-30 136.7 144 54.2
Duzib251G0803 Durio zibethinus HOM05D004542 ORTHO05D005380 2.2e-30 136.0 138 56.5
FvH4_4g13880 Fragaria vesca HOM05D004542 ORTHO05D005380 2.2e-30 136.0 134 53.7
FAN12G3669 Fragaria x ananassa HOM05D004542 ORTHO05D005380 2.2e-30 136.0 134 53.7
HanXRQChr12g0361941 Helianthus annuus HOM05D004542 ORTHO05D005380 2.2e-30 136.0 113 61.9
THA.LOC104808670 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 2.2e-30 136.0 139 54.7
A09p40150 Brassica napus HOM05D004542 ORTHO05D005380 2.9e-30 135.6 140 52.9
EL10Ac2g02750 Beta vulgaris HOM05D004542 ORTHO05D005380 6.5e-30 134.4 135 55.6
Eucgr.D00185 Eucalyptus grandis HOM05D004542 ORTHO05D005380 1.1e-29 133.7 116 58.6
Lsat_1_v5_gn_8_48901 Lactuca sativa HOM05D004542 ORTHO05D005380 1.1e-29 133.7 134 53.7
Nitab4.5_0001077g0020 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.1e-29 133.7 155 50.3
Psat0s1693g0080 Pisum sativum HOM05D004542 ORTHO05D005380 1.4e-29 133.3 138 55.1
DCAR_027429 Daucus carota HOM05D004542 ORTHO05D005380 4.2e-29 131.7 184 43.5
SGA_v2.0_scaffold455G51899 Striga asiatica HOM05D004542 ORTHO05D005380 4.2e-29 131.7 123 57.7
HanXRQChr15g0476941 Helianthus annuus HOM05D004542 ORTHO05D005380 5.5e-29 131.3 110 60.0
Aqoxy3G03464 Aquilegia oxysepala HOM05D004542 ORTHO05D005380 7.1e-29 131.0 126 60.3
CsaV3_5G032980 Cucumis sativus L. HOM05D004542 ORTHO05D005380 7.1e-29 131.0 141 51.8
PGR083G2602 Punica granatum HOM05D004542 ORTHO05D005380 7.1e-29 131.0 135 52.6
RcHm_v2.0_Chr6g0251041 Rosa chinensis HOM05D004542 ORTHO05D005380 7.1e-29 131.0 127 59.1
TPR.G5742 Trifolium pratense HOM05D004542 ORTHO05D005380 7.1e-29 131.0 135 54.1
RcHm_v2.0_Chr4g0414951 Rosa chinensis HOM05D004542 ORTHO05D005380 9.3e-29 130.6 137 51.8
FAN07G0300 Fragaria x ananassa HOM05D004542 ORTHO05D005380 1.2e-28 130.2 134 52.2
FAN22G1961 Fragaria x ananassa HOM05D004542 ORTHO05D005380 7.9e-28 127.5 134 50.7
VMungo0251G2924 Vigna mungo HOM05D004542 ORTHO05D005380 7.9e-28 127.5 134 54.5
Glyma.05G118100 Glycine max HOM05D004542 ORTHO05D005380 1.8e-27 126.3 132 54.5
Phvul.002G208200 Phaseolus vulgaris HOM05D004542 ORTHO05D005380 1.8e-27 126.3 133 54.9
MELO3C012119.2 Cucumis melo HOM05D004542 ORTHO05D005380 2.3e-27 125.9 141 53.2
Medtr1g025320 Medicago truncatula HOM05D004542 ORTHO05D005380 2.3e-27 125.9 120 56.7
Sed0021036 Sechium edule HOM05D004542 ORTHO05D005380 2.3e-27 125.9 132 52.3
Lalb_Chr10g0097781 Lupinus albus HOM05D004542 ORTHO05D005380 8.7e-27 124.0 132 52.3
AUR62031723 Chenopodium quinoa HOM05D004542 ORTHO05D005380 1.1e-26 123.6 136 53.7
ECA246G0207 Erigeron canadensis HOM05D004542 ORTHO05D005380 1.1e-26 123.6 133 48.9
Sc03g0001820 Simmondsia chinensis HOM05D004542 ORTHO05D005380 1.5e-26 123.2 126 56.3
Glyma.08G073000 Glycine max HOM05D004542 ORTHO05D005380 4.3e-26 121.7 132 53.8
PSO063G3361 Papaver somniferum HOM05D004542 ORTHO05D005380 5.7e-26 121.3 136 52.9
MBI02_g20485_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 1.6e-25 119.8 129 55.8
SalBow1G1756 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.6e-25 119.8 59 86.4
Lj4g0012875 Lotus japonicus HOM05D004542 ORTHO05D005380 6.3e-25 117.9 138 52.9
Ca_18347_v3 Cicer arietinum L. HOM05D004542 ORTHO05D005380 1.8e-24 116.3 137 50.4
arahy.Tifrunner.gnm1.ann1.53F0XR Arachis hypogaea HOM05D004542 ORTHO05D005380 3.1e-24 115.5 125 52.0
arahy.Tifrunner.gnm1.ann1.H527P9 Arachis hypogaea HOM05D004542 ORTHO05D005380 3.1e-24 115.5 125 52.0
CDE04G0708 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 4.1e-24 115.2 116 56.0
Lj4g0007672 Lotus japonicus HOM05D004542 ORTHO05D005380 4.1e-24 115.2 138 51.4
Ah.08g212630 Amaranthus hybridus HOM05D004542 ORTHO05D005380 5.3e-24 114.8 133 48.9
CDE07G0585 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 2.2e-22 109.4 116 53.4
Glyma.06G320500 Glycine max HOM05D004542 ORTHO05D005380 2.9e-22 109.0 130 46.9
CANSAT21G0056 Cannabis sativa HOM05D004542 ORTHO05D005380 5.0e-22 108.2 113 58.4
Os10g0407100 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 6.5e-22 107.8 60 76.7
Hund04421 Selenicereus undatus HOM05D004542 ORTHO05D005380 6.5e-22 107.8 111 57.7
Os03g0168900 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 8.5e-22 107.5 135 46.7
Haze_11968 Corylus avellana HOM05D004542 ORTHO05D005380 1.1e-21 107.1 111 55.0
AT1G69485 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 2.5e-21 105.9 59 76.3
Oeu054854.1 Olea europaea HOM05D004542 ORTHO05D005380 3.2e-21 105.5 111 55.9
TPR.G8852 Trifolium pratense HOM05D004542 ORTHO05D005380 3.2e-21 105.5 126 50.0
AUR62032610 Chenopodium quinoa HOM05D004542 ORTHO05D005380 5.5e-21 104.8 170 42.4
Sopen03g017060 Solanum pennellii HOM05D004542 ORTHO05D005380 7.2e-21 104.4 60 75.0
COL.COLO4_32021 Corchorus olitorius HOM05D004542 ORTHO05D005380 2.7e-20 102.4 110 55.5
Zm00001eb402400 Zea mays HOM05D004542 ORTHO05D005380 3.6e-20 102.1 60 71.7
Manes.05G105400 Manihot esculenta HOM05D004542 ORTHO05D005380 3.0e-19 99.0 117 53.8
Sp1g22070 Schrenkiella parvula HOM05D004542 ORTHO05D005380 3.0e-19 99.0 118 50.8
Rhsim05G0092000 Rhododendron simsii HOM05D004542 ORTHO05D005380 2.5e-18 95.9 114 51.8
RhsimUnG0183400 Rhododendron simsii HOM05D004542 ORTHO05D005380 2.5e-18 95.9 114 51.8
MD13G1284400 Malus domestica HOM05D002269 ORTHO05D005380 7.4e-18 94.4 74 67.6
Nitab4.5_0000014g0150 Nicotiana tabacum HOM05D004542 ORTHO05D005380 7.4e-18 94.4 145 43.4
Carub.0002s1610 Capsella rubella HOM05D004542 ORTHO05D005380 9.1e-16 87.4 50 72.0
Mapoly0152s0024 Marchantia polymorpha HOM05D004542 ORTHO05D005380 2.6e-15 85.9 63 58.7
CBR_g23146 Chara braunii HOM05D004542 ORTHO05D005380 1.0e-14 84.0 50 70.0
Pp3c1_32410 Physcomitrium patens HOM05D004542 ORTHO05D005380 1.3e-14 83.6 50 70.0
Ciclev10013639m.g Citrus clementina HOM05D004542 ORTHO05D005380 2.2e-14 82.8 132 42.4
AagrBONN_evm.TU.Sc2ySwM_228.5417 Anthoceros agrestis HOM05D004542 ORTHO05D005380 5.0e-14 81.6 122 43.4
SMO358G0607 Selaginella moellendorffii HOM05D000228 ORTHO05D005112 9.4e-13 77.4 49 63.3
PSO782G1969 Papaver somniferum HOM05D004542 ORTHO05D005380 1.6e-12 76.6 111 46.8
Glyma.04G115800 Glycine max HOM05D004542 ORTHO05D005380 2.7e-12 75.9 63 68.3
MBI02_g44667_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 1.8e-11 73.2 105 50.5
Sabra10G0125700 Salix brachista HOM05D004542 ORTHO05D005380 5.1e-11 71.6 97 48.5
Zm00001eb005320 Zea mays HOM05D004542 ORTHO05D005380 8.8e-11 70.9 67 56.7
COL.COLO4_27991 Corchorus olitorius HOM05D004542 ORTHO05D005380 1.4e-08 63.5 106 49.1
SalBow1G4992 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.4e-08 63.5 83 48.2
SalBow1G0501 Salvia bowleyana HOM05D004542 ORTHO05D005380 7.0e-08 61.2 83 47.0
PGSC0003DMG400005564 Solanum tuberosum HOM05D004542 ORTHO05D005380 1.5e-07 60.1 66 50.0
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 2.0e-07 59.7 37 73.0
vmacro01351 Vaccinium macrocarpon HOM05D004542 ORTHO05D005380 3.4e-07 58.9 90 46.7
MCO02G272 Micromonas commoda HOM05D004542 ORTHO05D005380 1.0e-06 57.4 130 32.3
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 2.9e-06 55.8 46 65.2
SalBow1G3820 Salvia bowleyana HOM05D004542 ORTHO05D005380 5.0e-06 55.1 83 44.6
SEGI_34151 Sequoiadendron giganteum HOM05D004542 ORTHO05D005380 6.5e-06 54.7 36 66.7
vmacro01352 Vaccinium macrocarpon HOM05D004542 ORTHO05D005380 6.5e-06 54.7 25 96.0


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